Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00423 | ATGTCGATGCCGTCGCCGTTGCCTTTTCTCATCCGGCGGCACTCAAGTGACGATTTAAAGAACTTGACGTCGGTTTCCAGCAGCCTCTTGCCCGCGTTTGGAACGGTTGTGAATGGTGGATACACGCACCTGAATAAATTCGTGGTAGTTCCATATGACAGAAGATATCGGTGGTGGCAAACTTTCCTGGTGGTGTTAGTGGTGTACTCTGCGTGGGCATCTCCCTTTGAGCTTGCCTTCAAGAAAGTGGCAACTGGGTCTCTTTTACCCGTTGATCTGTTGGTGGATGCATTCTTTGCCCTTGATATCGTGTTGACCTTCTTCGTCGCTTACTTGGATAAATCCACCTATCTCCTCGTTGACGATCATAAGAAGATAGCTGTACGTTACCTTACAAGCCTGTGGTTCCCCATGGACGTAGCCTCCACTCTTCCATTACAGGCAATACACAGAATTTTGACTGGAAAGATGTACCGCAGTGAGGCCTTCGGTTTCCTCAATTTACTTCGGTTCTGGCGACTAAGGCGTGTTGGTGAGCTCTTCACAAGGTTGGAGAAAGACATACGCTTTAGTTACTTCTTAACAAGACTCGTCAAACTAATTTGTGTTACACTGTTGGCAGTTCATTCAGCTGGTTGTTTCTACTATTGGCTAGCAGTTCATCATAAAGAACCAGGAAATACATGGATTGGAGTTGAAGTTGAAGATTTTGAGAACAGGAATATCTGGGTTGGGTACACGTATTCGATATATTGGTCCATTGTCACACTTACTACTGTCGGTTATGGCGACTTGCATGCAGTTAATTTAGGTGAGAAGATTTTTAGCATCTGCTACATGCTATTCAACATTGGCCTCACATCTTATTTGATCGGAAACATGACAAATCTCATTGTTCATGGTGCTGTCCGAACATATATCATGAGGGATTCCATAAATGAGATTCTGCGTTATGGAAGCAAGAATAGACTGCCAGAAGGCTTGAAAGATCAAATGTTGGCGCACATGCAGCTCAAGTTCAAGACAGCAGAGTTGAAGCAAGAAGAGGTGTTGGAGGATTTACCTAAAGCGATCAGATCCAGTATTGCCCAGCACCTTTTCGGACAAACAGTTGAGAGTGCATACTTATTCAAGGGGATCTCTGAAGATCTCATCGTTCAATTGGTATCTGCGATGAAAGCAGAGTACTTTCCACCTAAAGTTGATATCATAATACAAAACGAGATACCAACAGATTTCTACATTTTGGTGTCTGGATCAGTGGATATGATATCGTACAAGAATGGAAATGAACAGGTTTTGGCAAATCTGGAATCTCCACAGATGGCAGGGGAAATTGCTGTGATGTTGAATATTCCACAGCCATTTACAGTGAGAACTAAAAGACTCTCCCAAGTCATCAGGATCAGTCACCATCATTTTAAGCAAATTTTACAATCAAACAATGAAGATGGAAAAATCCTTCTCTCCAACTTCACTGAGCACTTGAAGGGGTTAAAAAGGGGGGAGCAAAACGAAATACCCTACTTTGCAGAATTTCTGGAAGACATAAATACAGAGCGTACAGAGCCAAATGAGAAACAAAATCAAAGAGTACCTTATCATGGTGATCAAAAAATGGAAGGAAGACCAAAAGCATCGAAACAATTTCCACCTACAAATTCCATCAGGGTGATAATCCACGGGCACCATCCAGATGAAAGTACAGAAGACGGCAACAGTATGGGAAAACTGATACTTCTGCCTAAGTCAATTGAAGAACTTTTCGGATTGGCAGGGAAAAGATTTGGCAAGAGAGGGAGCTCAATTCTCATGGCTGATGGCTCTAAAATAGAGGACTTGAATGTTTTAAGAGAGGGTGATCATTTATTCTTTGTTTGA | 1881 | 42.48 | MSMPSPLPFLIRRHSSDDLKNLTSVSSSLLPAFGTVVNGGYTHLNKFVVVPYDRRYRWWQTFLVVLVVYSAWASPFELAFKKVATGSLLPVDLLVDAFFALDIVLTFFVAYLDKSTYLLVDDHKKIAVRYLTSLWFPMDVASTLPLQAIHRILTGKMYRSEAFGFLNLLRFWRLRRVGELFTRLEKDIRFSYFLTRLVKLICVTLLAVHSAGCFYYWLAVHHKEPGNTWIGVEVEDFENRNIWVGYTYSIYWSIVTLTTVGYGDLHAVNLGEKIFSICYMLFNIGLTSYLIGNMTNLIVHGAVRTYIMRDSINEILRYGSKNRLPEGLKDQMLAHMQLKFKTAELKQEEVLEDLPKAIRSSIAQHLFGQTVESAYLFKGISEDLIVQLVSAMKAEYFPPKVDIIIQNEIPTDFYILVSGSVDMISYKNGNEQVLANLESPQMAGEIAVMLNIPQPFTVRTKRLSQVIRISHHHFKQILQSNNEDGKILLSNFTEHLKGLKRGEQNEIPYFAEFLEDINTERTEPNEKQNQRVPYHGDQKMEGRPKASKQFPPTNSIRVIIHGHHPDESTEDGNSMGKLILLPKSIEELFGLAGKRFGKRGSSILMADGSKIEDLNVLREGDHLFFV | 626 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2340360 | 2347740 | + | Cp4.1LG02g04480.1 | Cpe02g00423 | 464372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00423 | 626 | Gene3D | Jelly Rolls | 341 | 503 | IPR014710 | - | |
Cpe02g00423 | 626 | Pfam | KHA, dimerisation domain of potassium ion channel | 557 | 625 | IPR021789 | - | |
Cpe02g00423 | 626 | PRINTS | EAG/ELK/ERG potassium channel family signature | 92 | 102 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe02g00423 | 626 | PRINTS | EAG/ELK/ERG potassium channel family signature | 103 | 112 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe02g00423 | 626 | PRINTS | EAG/ELK/ERG potassium channel family signature | 246 | 263 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe02g00423 | 626 | PRINTS | EAG/ELK/ERG potassium channel family signature | 272 | 283 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe02g00423 | 626 | PRINTS | EAG/ELK/ERG potassium channel family signature | 290 | 299 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe02g00423 | 626 | Pfam | Ion transport protein | 56 | 302 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe02g00423 | 626 | PANTHER | POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED | 5 | 57 | - | - | |
Cpe02g00423 | 626 | PANTHER | POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED | 57 | 625 | - | - | |
Cpe02g00423 | 626 | SMART | cnmp_10 | 376 | 493 | IPR000595 | - | |
Cpe02g00423 | 626 | SUPERFAMILY | cAMP-binding domain-like | 305 | 495 | IPR018490 | - | |
Cpe02g00423 | 626 | ProSiteProfiles | KHA domain profile. | 557 | 626 | IPR021789 | - | |
Cpe02g00423 | 626 | Gene3D | - | 58 | 300 | - | - | |
Cpe02g00423 | 626 | PANTHER | POTASSIUM CHANNEL AKT1 | 57 | 625 | IPR045319 | GO:0005249|GO:0006813 | |
Cpe02g00423 | 626 | PANTHER | POTASSIUM CHANNEL AKT1 | 5 | 57 | IPR045319 | GO:0005249|GO:0006813 | |
Cpe02g00423 | 626 | Pfam | Cyclic nucleotide-binding domain | 396 | 481 | IPR000595 | - | |
Cpe02g00423 | 626 | MobiDBLite | consensus disorder prediction | 520 | 551 | - | - | |
Cpe02g00423 | 626 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 376 | 495 | IPR000595 | - | |
Cpe02g00423 | 626 | SUPERFAMILY | Voltage-gated potassium channels | 51 | 299 | - | - | |
Cpe02g00423 | 626 | MobiDBLite | consensus disorder prediction | 520 | 544 | - | - | |
Cpe02g00423 | 626 | CDD | CAP_ED | 376 | 489 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00476 | Cpe-Chr1:2744790 | Cpe02g00423 | Cpe-Chr2:2340360 | 9.81E-153 | dispersed | |
Cpe02g00423 | Cpe-Chr2:2340360 | Cpe20g00503 | Cpe-Chr20:2920730 | 0 | dispersed | |
Cpe02g00423 | Cpe-Chr2:2340360 | Cpe06g00368 | Cpe-Chr6:2067318 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00423 | K21867 | - | csv:101215177 | 1080.86 |