Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00434 ATGAGTACGGAAAACGTTGCTTTTGAAGTTGAAGAGTGCTCTGTCCGGATCACGAGGGCACGGGCAAAAGAGCTTAGCGAATCAGGAGGCATTCTATGCTCCTCAAAATCTTCTCGAGTTCAGAAGCCACTTCTACGAGCTAACTCAAAAAGAATGGCATCTGATGATATTAAGATTTGTTCAATCTCTTCCAATGGCCTTCCTATTAAAAGAAGAGCAGTGCTCAAGGATGTGACTAACATTTCCACCAAAGGGTCTGATAAGAATTGCGGCAATGCTTCTAATGTTCGGGGTGCCAAACCAACTAGAAGAGTTTCTGCGAAGGCTAAGGAAAATGCACCTTTAAATGTTTCTGTAGGAGCAGAAGAAGATGCAAACACAAGATTAGCAGAGGATTTGTCTAAAGTAAGGGTGGTAGAATCACAAGAGGTCTCTTCACGAGAAACTTCAGACAAAAAAGAGAGAACAGTGCAAGCCATGTGTCCCAATAGCAGAGACTGTGGAGTTTCAGATATTACTCTCTCTGAATCTTCAGATGAATCTGTCCCTCAGCCAAACGAAAAAAATATGGCACCTGAACAATCGGCAGCATCTAAGGATAGAGGCATTATAAACATTGATTCGGACTCCAAATGTCTTCAATCATGCAGCATATATGCTCCAGACATATATGACAGGATACGTGTGGCGGAGCTTGATCAAAGGACCTCAACAAACTATATGGAACAGTTGCAGCAAGATATCACTGAAAAAATGCGAGGAATACTGGTTGATTGGATTGTAGAGGTCTCTGAAGAATATAAGCTGGTTCCAGATACGCTCTATCTCACTGTGAATATTATTGATCGGTTTCTCTCGCAAAATCATATGGAGAAAAAACGTCTGCAACTTTTAGGTGTTGCATGTATGCTAATTGCATCGAAATATGAGGAGATCTGTGCACCGAGAGTGGAAGATTTCTGCTTCATTACTGATAATACTTACACAAAAGGAGAGGTAGTAGAAATGGAGAGTGAAGTTCTGAATCAACTGCACTTTCGTCTATCTGTTCCCACTACAAAGACATTTCTAAGGAGATTCATACAATCAGCTCATGCTTCTTACAAGGATCCTTGCACTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGAGTCTTGTTGAATACAGCTTCTTAAAGTTCCTTCCTTCTCTGATAGCCGCATCAGCCGTATTTCTTGCGAGATGGACACTTGACCAATCAGATCATCCCTGGAATCCAACTCTAGAGCACTATACATGTTACAACGCTTCTGAGCTGAAAACTGTAGTGCTTGCCCTCCAAGACTTGCAACTTAACACCAGTGGTTCCTCGCTAAATGCCATACGTGAGAAGTATAAACAACCCAAGGTAAGAACTAGAAAAAAAATTCAAATGCGTAGCGAAACTAACATCTACTCGATCGGTTCTATCACTATTCTGAAGAACAAGAATGATCATTTTCTTGCCAAAACACTACAGGAGGATGTCTTATCTTTTGAGTTGATCTGCCATTCTCCTTCTAACCTCCCCCAACTGTGA 1563 41.2 MSTENVAFEVEECSVRITRARAKELSESGGILCSSKSSRVQKPLLRANSKRMASDDIKICSISSNGLPIKRRAVLKDVTNISTKGSDKNCGNASNVRGAKPTRRVSAKAKENAPLNVSVGAEEDANTRLAEDLSKVRVVESQEVSSRETSDKKERTVQAMCPNSRDCGVSDITLSESSDESVPQPNEKNMAPEQSAASKDRGIINIDSDSKCLQSCSIYAPDIYDRIRVAELDQRTSTNYMEQLQQDITEKMRGILVDWIVEVSEEYKLVPDTLYLTVNIIDRFLSQNHMEKKRLQLLGVACMLIASKYEEICAPRVEDFCFITDNTYTKGEVVEMESEVLNQLHFRLSVPTTKTFLRRFIQSAHASYKDPCTELEFLANYLAELSLVEYSFLKFLPSLIAASAVFLARWTLDQSDHPWNPTLEHYTCYNASELKTVVLALQDLQLNTSGSSLNAIREKYKQPKVRTRKKIQMRSETNIYSIGSITILKNKNDHFLAKTLQEDVLSFELICHSPSNLPQL 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2437300 2443961 - Cp4.1LG02g04290.1 Cpe02g00434 464383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00434 520 ProSitePatterns Cyclins signature. 253 284 IPR006671 -
Cpe02g00434 520 Pfam Cyclin, C-terminal domain 351 470 IPR004367 -
Cpe02g00434 520 PANTHER CYCLIN-A2-4 50 466 - -
Cpe02g00434 520 PANTHER CYCLINS 50 466 IPR039361 -
Cpe02g00434 520 CDD CYCLIN 252 341 IPR013763 -
Cpe02g00434 520 Gene3D - 222 465 - -
Cpe02g00434 520 SUPERFAMILY Cyclin-like 214 348 IPR036915 -
Cpe02g00434 520 CDD CYCLIN 349 441 IPR013763 -
Cpe02g00434 520 SMART cyclin_7 355 443 IPR013763 -
Cpe02g00434 520 SMART cyclin_7 258 342 IPR013763 -
Cpe02g00434 520 MobiDBLite consensus disorder prediction 86 111 - -
Cpe02g00434 520 SMART Cyclin_C_2 351 477 IPR004367 -
Cpe02g00434 520 Gene3D - 236 349 - -
Cpe02g00434 520 MobiDBLite consensus disorder prediction 168 200 - -
Cpe02g00434 520 MobiDBLite consensus disorder prediction 168 193 - -
Cpe02g00434 520 Pfam Cyclin, N-terminal domain 222 349 IPR006671 -
Cpe02g00434 520 SUPERFAMILY Cyclin-like 350 465 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00434 Cpe-Chr2:2437300 Cpe12g00714 Cpe-Chr12:6723254 9.66E-145 dispersed
Cpe02g00434 Cpe-Chr2:2437300 Cpe06g00355 Cpe-Chr6:1977645 0 wgd
Cpe02g00434 Cpe-Chr2:2437300 Cpe07g00263 Cpe-Chr7:1707425 1.06E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00434 K06627 - csv:101204275 745.732