Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00458 | ATGGAAGCAAATGCGGGATTGGTGGCTGGATCTTACAAGAGGAATGAGCTTGTTCGTATTCGCCACGATTCCGACAATGGGCCTAAACCTCTGAAGAACATAAACAGCCAAATATGTCAAATATGTGGCGACACCGTTGGTCTTACGGCCTCTGGTGATATCTTTGTCGCTTGCAACGAATGCGCCTTTCCTGTTTGTCGTCCATGTTACGAGTACGAGAGGAAAGACGGGAACCAGTCTTGCCCTCAGTGCAAGACTAGATACAAGAGGCACAAAGGTAGTCCTCGAGTCGATGGCGATGATGACGAGGATGACGTTTCGAGTGAAATTCCTTATGCAACACCCGACAATCAATCAGTACGAACAACATCCGGTTCGTTGGGTCCTCCCGACAAGCATTTGCACTCACATCCTTACGTCGACCCTCGACAGCCAGTTCCTGTGAGAATTGTTGACCCATCAAAGGATTTGAACTCTTATGGCCTTGGGAATGTTGATTGGAAAGAAAGAGTGGAAGGTTGGAAATTGAAACAAGAGAAGAACATAATGCAGATGACAAGTAGATACTCAGAAGGGAAGGGAGACTTGGAAGGCACTGGCTCCAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTAAGTCGTGTGGTTCCGATTCCATCTTCTCACTTGACCCCGTATCGTGTCGTGATCATACTTCGACTTATTATTCTCGGCTTCTTCTTACAATACCGTTTGACGCACCCGGTGAAGGATGCATACCCCTTGTGGCTAACATCAGTTATTTGTGAAGTTTGGTTTGCACTATCCTGGCTTTTGGATCAGTTCCCGAAATGGTCTCCGGTTAATCGTGAAACTTTCCTCGAGCGACTCGCATTAAGATACGATCGTGAAGGAGAACCNGATTATGTTATCATGCATCCTTTCCAATGCTGCGTTTCTCGAGTAAAAAAAAGAAAAAGCTTACGATCTGCTGTTTTGTTTCAGGTTTCGAGTGAAATTCCTTATGCAACACCCGACAATCAATCAGTACGAACAACATCCGGTTCGTTGGGTCCTCCCGACAAGCATTTGCACTCACATCCTTACGTCGACCCTCGACAGCCAGTTCCTGTGAGAATTGTTGACCCATCAAAGGATTTGAACTCTTATGGCCTTGGGAATGTTGATTGGAAAGAAAGAGTGGAAGGTTGGAAATTGAAACAAGAGAAGAACATAATGCAGATGACAAGTAGATACTCAGAAGGGAAGGGAGACTTGGAAGGCACTGGCTCCAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTAAGTCGTGTGGTTCCGATTCCATCTTCTCACTTGACCCCGTATCGTGTCGTGATCATACTTCGACTTATTATTCTCGGCTTCTTCTTACAATACCGTTTGACGCACCCGGTGAAGGATGCATACCCCTTGTGGCTAACATCAGTTATTTGTGAAGTTTGGTTTGCACTATCCTGGCTTTTGGATCAGTTCCCGAAATGGTCTCCGGTTAATCGTGAAACTTTCCTCGAGCGACTCGCATTAAGATACGATCGTGAAGGAGAACCGTCGCAGTTAGCTCCTGTTGATGTTTTTGTTAGTACTGTGGATCCTCTCAAAGAGCCTCCACTTGTCACAGCTAACACCGTGCTTTCCATCCTTGCTGTGGACTACCCTGTCGACAAAGTCTCCTGCTATGTGTCGGATGATGGTTCGGCAATGCTTACGTTTGAATCGCTCTCTGAAACTGCAGAGTTTGCAAGGAAGTGGGTGCCTTTTTGCAAGAAGCATAGCATTGAACCAAGGGCCCCAGAGTTTTATTTTGCTCAAAAGATAGATTACTTAAAGGACAAGATTAAACCTTCGTTCGTAAAAGAGCGTCGAGCGATGAAGAGAGAGTATGAAGAATTCAAGATTCGAATCAATGCACTTGTTGCCAAAGCACAAAAGATGCCTGAGGAAGGTTGGACCATGCAGGATGGAACGCCATGGCCAGGAAATAATCCCAGGGATCATCCTGGAATGATACAGGTTTTCTTAGGCCACAGTGGAGGTCTCGATACCGATGGCAATGAACTACCTAGACTTGTTTATGTTTCTCGTGAGAAACGTCCTGGCTTCCAGCACCACAAAAAAGCTGGAGCTATGAATGCATTGATCCGAGTTTCTGCCGTGCTAACTAACGGAGCGTATCTTTTGAATGTCGATTGTGATCACTACTTTAACAACAGCAAAGCTCTGAAGGAAGCCATGTGTTTCATGATGGACCCTGCTTATGGGAAGAAAACATGTTACGTACAGTTCCCACAACGTTTTGATGGCATTGATTTGCACGATCGATATGCTAATCGTAACATTGTCTTTTTCGACATAAACTTGAAAGGGTTGGATGGTCTCCAGGGTCCTGTCTATGTCGGAACTGGTTGTTGTTTCAATCGACAAGCTTTATACGGTTACGATCCAGTCCTGACCGAGGCAGATTTGGAACCGAATATTATCATTAAGAGTTGTTGTGGTTCGAGAAAGAAGCACCGGAATAAGAAGTACGTCGACAAGAAGAGGGCTGCAAAAAGGACTGAGTCTACCATTCCTATCTTTAATATGGAAGATATCGTTGAAGGATATGATGATGAGAGTTCACTCCTGATGTCTCAGAAGCGTATAGAAAAACGCTTCGGTCAATCTCCGGTTTTCATTGCAGCCACTTTCATGGAACAGGGAGGTATACCACCTTCAACCAACCCTGCAACACTACTAAAGGAAGCAATTCATGTCATTAGTTGTGGTTATGAAGACAAGACAGAATGGGGCAAGGAGATGCATGCTCGTGGTTGGATTTCGATATATTGTATGCCTCCACGCCCGGCGTTCAAGGGATCTGCTCCGATCAATCTTTCGGATCGATTGAACCAAGTGCTTCGATGGGCTCTGGGTTCGATAGAGATTTTGCTCAGCAGGCATTGTCCTATCTGGTATGGCTACAATGGAAGGCTAAAGCTTTTGGAGAGAATAGCATACATCAATACCATTGTCTACCCTATCACCTCAATTCCACTTCTTGCATACTGTACGCTTCCAGCCTTCTGTCTTTTGACTGGAAAGTTCATCATTCCTGAGATAAGCAACTTTGCCAGTATGTGGTTCATTCTCCTTTTCGTCTCCATTTTCGCCACCGGTATTCTCGAGCTTAGATGGAGCGGAGTTAGCATTGAAGACTGGTGGAGAAACGAACAATTTTGGGTCATTGGTGGTACTTCAGCTCATCTGTTTGCTGTCTTCCAAGGTCTCTTAAAGGTTCTTGCTGGAATCGATACCAACTTCACCGTCACGTCGAAAGCCAGCGACGATGACGGGGATTTTGCAGAGCTTTACGTGTTCAAATGGACTTCCCTCCTCATCCCTCCCACCACTGTCCTTATTATAAACATGGTTGGCATAGTGGCTGGTGTTTCATATGCCATTAACAGTGGTTACCAATCTTGGGGCCCTCTCTTTGGGAAGCTGTTCTTTGCATTATGGGTCATTGTCCATTTATATCCTTTCCTAAAGGGTTTATTGGGGAGGCAAAACCGAACGCCTACCATTGTCATCGTCTGGTCGATTCTCCTCGCTTCGATATTCTCCTTGCTTTGGGTGCGAATCGACCCGTTCACCTCTGCGTCGACGAAGGCTGCCAATGGTCAATGTGGTATCAATTGCTAG | 3726 | 45.46 | MEANAGLVAGSYKRNELVRIRHDSDNGPKPLKNINSQICQICGDTVGLTASGDIFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVSSEIPYATPDNQSVRTTSGSLGPPDKHLHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNIMQMTSRYSEGKGDLEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKDAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPDYVIMHPFQCCVSRVKKRKSLRSAVLFQVSSEIPYATPDNQSVRTTSGSLGPPDKHLHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNIMQMTSRYSEGKGDLEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKDAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFESLSETAEFARKWVPFCKKHSIEPRAPEFYFAQKIDYLKDKIKPSFVKERRAMKREYEEFKIRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGLQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIIIKSCCGSRKKHRNKKYVDKKRAAKRTESTIPIFNMEDIVEGYDDESSLLMSQKRIEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCTLPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIINMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSASTKAANGQCGINC | 1241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2585423 | 2596506 | - | Cp4.1LG02g04140.1 | Cpe02g00458 | 464407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00458 | 1241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 111 | IPR013083 | - | |
Cpe02g00458 | 1241 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
Cpe02g00458 | 1241 | Pfam | Cellulose synthase | 537 | 1232 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Cpe02g00458 | 1241 | MobiDBLite | consensus disorder prediction | 342 | 366 | - | - | |
Cpe02g00458 | 1241 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 551 | 1057 | IPR029044 | - | |
Cpe02g00458 | 1241 | CDD | mRING-HC-C4C4_CesA_plant | 37 | 87 | - | - | |
Cpe02g00458 | 1241 | MobiDBLite | consensus disorder prediction | 74 | 146 | - | - | |
Cpe02g00458 | 1241 | PANTHER | CELLULOSE SYNTHASE | 144 | 321 | - | - | |
Cpe02g00458 | 1241 | PANTHER | CELLULOSE SYNTHASE | 364 | 1241 | - | - | |
Cpe02g00458 | 1241 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 695 | 832 | IPR029044 | - | |
Cpe02g00458 | 1241 | SUPERFAMILY | RING/U-box | 22 | 110 | - | - | |
Cpe02g00458 | 1241 | PANTHER | CELLULOSE SYNTHASE | 19 | 107 | - | - | |
Cpe02g00458 | 1241 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 19 | 107 | - | - | |
Cpe02g00458 | 1241 | Pfam | Zinc-binding RING-finger | 29 | 106 | IPR027934 | - | |
Cpe02g00458 | 1241 | Coils | Coil | 635 | 655 | - | - | |
Cpe02g00458 | 1241 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 364 | 1241 | - | - | |
Cpe02g00458 | 1241 | MobiDBLite | consensus disorder prediction | 111 | 126 | - | - | |
Cpe02g00458 | 1241 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 144 | 321 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00458 | Cpe06g00347 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00458 | Cpe-Chr2:2585423 | Cpe19g00060 | Cpe-Chr19:447906 | 2.88E-86 | dispersed | |
Cpe14g00448 | Cpe-Chr14:2802262 | Cpe02g00458 | Cpe-Chr2:2585423 | 9.26E-31 | dispersed | |
Cpe02g00458 | Cpe-Chr2:2585423 | Cpe06g00347 | Cpe-Chr6:1929692 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00458 | K10999 | - | csv:101205724 | 1809.65 |