Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00458 ATGGAAGCAAATGCGGGATTGGTGGCTGGATCTTACAAGAGGAATGAGCTTGTTCGTATTCGCCACGATTCCGACAATGGGCCTAAACCTCTGAAGAACATAAACAGCCAAATATGTCAAATATGTGGCGACACCGTTGGTCTTACGGCCTCTGGTGATATCTTTGTCGCTTGCAACGAATGCGCCTTTCCTGTTTGTCGTCCATGTTACGAGTACGAGAGGAAAGACGGGAACCAGTCTTGCCCTCAGTGCAAGACTAGATACAAGAGGCACAAAGGTAGTCCTCGAGTCGATGGCGATGATGACGAGGATGACGTTTCGAGTGAAATTCCTTATGCAACACCCGACAATCAATCAGTACGAACAACATCCGGTTCGTTGGGTCCTCCCGACAAGCATTTGCACTCACATCCTTACGTCGACCCTCGACAGCCAGTTCCTGTGAGAATTGTTGACCCATCAAAGGATTTGAACTCTTATGGCCTTGGGAATGTTGATTGGAAAGAAAGAGTGGAAGGTTGGAAATTGAAACAAGAGAAGAACATAATGCAGATGACAAGTAGATACTCAGAAGGGAAGGGAGACTTGGAAGGCACTGGCTCCAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTAAGTCGTGTGGTTCCGATTCCATCTTCTCACTTGACCCCGTATCGTGTCGTGATCATACTTCGACTTATTATTCTCGGCTTCTTCTTACAATACCGTTTGACGCACCCGGTGAAGGATGCATACCCCTTGTGGCTAACATCAGTTATTTGTGAAGTTTGGTTTGCACTATCCTGGCTTTTGGATCAGTTCCCGAAATGGTCTCCGGTTAATCGTGAAACTTTCCTCGAGCGACTCGCATTAAGATACGATCGTGAAGGAGAACCNGATTATGTTATCATGCATCCTTTCCAATGCTGCGTTTCTCGAGTAAAAAAAAGAAAAAGCTTACGATCTGCTGTTTTGTTTCAGGTTTCGAGTGAAATTCCTTATGCAACACCCGACAATCAATCAGTACGAACAACATCCGGTTCGTTGGGTCCTCCCGACAAGCATTTGCACTCACATCCTTACGTCGACCCTCGACAGCCAGTTCCTGTGAGAATTGTTGACCCATCAAAGGATTTGAACTCTTATGGCCTTGGGAATGTTGATTGGAAAGAAAGAGTGGAAGGTTGGAAATTGAAACAAGAGAAGAACATAATGCAGATGACAAGTAGATACTCAGAAGGGAAGGGAGACTTGGAAGGCACTGGCTCCAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTAAGTCGTGTGGTTCCGATTCCATCTTCTCACTTGACCCCGTATCGTGTCGTGATCATACTTCGACTTATTATTCTCGGCTTCTTCTTACAATACCGTTTGACGCACCCGGTGAAGGATGCATACCCCTTGTGGCTAACATCAGTTATTTGTGAAGTTTGGTTTGCACTATCCTGGCTTTTGGATCAGTTCCCGAAATGGTCTCCGGTTAATCGTGAAACTTTCCTCGAGCGACTCGCATTAAGATACGATCGTGAAGGAGAACCGTCGCAGTTAGCTCCTGTTGATGTTTTTGTTAGTACTGTGGATCCTCTCAAAGAGCCTCCACTTGTCACAGCTAACACCGTGCTTTCCATCCTTGCTGTGGACTACCCTGTCGACAAAGTCTCCTGCTATGTGTCGGATGATGGTTCGGCAATGCTTACGTTTGAATCGCTCTCTGAAACTGCAGAGTTTGCAAGGAAGTGGGTGCCTTTTTGCAAGAAGCATAGCATTGAACCAAGGGCCCCAGAGTTTTATTTTGCTCAAAAGATAGATTACTTAAAGGACAAGATTAAACCTTCGTTCGTAAAAGAGCGTCGAGCGATGAAGAGAGAGTATGAAGAATTCAAGATTCGAATCAATGCACTTGTTGCCAAAGCACAAAAGATGCCTGAGGAAGGTTGGACCATGCAGGATGGAACGCCATGGCCAGGAAATAATCCCAGGGATCATCCTGGAATGATACAGGTTTTCTTAGGCCACAGTGGAGGTCTCGATACCGATGGCAATGAACTACCTAGACTTGTTTATGTTTCTCGTGAGAAACGTCCTGGCTTCCAGCACCACAAAAAAGCTGGAGCTATGAATGCATTGATCCGAGTTTCTGCCGTGCTAACTAACGGAGCGTATCTTTTGAATGTCGATTGTGATCACTACTTTAACAACAGCAAAGCTCTGAAGGAAGCCATGTGTTTCATGATGGACCCTGCTTATGGGAAGAAAACATGTTACGTACAGTTCCCACAACGTTTTGATGGCATTGATTTGCACGATCGATATGCTAATCGTAACATTGTCTTTTTCGACATAAACTTGAAAGGGTTGGATGGTCTCCAGGGTCCTGTCTATGTCGGAACTGGTTGTTGTTTCAATCGACAAGCTTTATACGGTTACGATCCAGTCCTGACCGAGGCAGATTTGGAACCGAATATTATCATTAAGAGTTGTTGTGGTTCGAGAAAGAAGCACCGGAATAAGAAGTACGTCGACAAGAAGAGGGCTGCAAAAAGGACTGAGTCTACCATTCCTATCTTTAATATGGAAGATATCGTTGAAGGATATGATGATGAGAGTTCACTCCTGATGTCTCAGAAGCGTATAGAAAAACGCTTCGGTCAATCTCCGGTTTTCATTGCAGCCACTTTCATGGAACAGGGAGGTATACCACCTTCAACCAACCCTGCAACACTACTAAAGGAAGCAATTCATGTCATTAGTTGTGGTTATGAAGACAAGACAGAATGGGGCAAGGAGATGCATGCTCGTGGTTGGATTTCGATATATTGTATGCCTCCACGCCCGGCGTTCAAGGGATCTGCTCCGATCAATCTTTCGGATCGATTGAACCAAGTGCTTCGATGGGCTCTGGGTTCGATAGAGATTTTGCTCAGCAGGCATTGTCCTATCTGGTATGGCTACAATGGAAGGCTAAAGCTTTTGGAGAGAATAGCATACATCAATACCATTGTCTACCCTATCACCTCAATTCCACTTCTTGCATACTGTACGCTTCCAGCCTTCTGTCTTTTGACTGGAAAGTTCATCATTCCTGAGATAAGCAACTTTGCCAGTATGTGGTTCATTCTCCTTTTCGTCTCCATTTTCGCCACCGGTATTCTCGAGCTTAGATGGAGCGGAGTTAGCATTGAAGACTGGTGGAGAAACGAACAATTTTGGGTCATTGGTGGTACTTCAGCTCATCTGTTTGCTGTCTTCCAAGGTCTCTTAAAGGTTCTTGCTGGAATCGATACCAACTTCACCGTCACGTCGAAAGCCAGCGACGATGACGGGGATTTTGCAGAGCTTTACGTGTTCAAATGGACTTCCCTCCTCATCCCTCCCACCACTGTCCTTATTATAAACATGGTTGGCATAGTGGCTGGTGTTTCATATGCCATTAACAGTGGTTACCAATCTTGGGGCCCTCTCTTTGGGAAGCTGTTCTTTGCATTATGGGTCATTGTCCATTTATATCCTTTCCTAAAGGGTTTATTGGGGAGGCAAAACCGAACGCCTACCATTGTCATCGTCTGGTCGATTCTCCTCGCTTCGATATTCTCCTTGCTTTGGGTGCGAATCGACCCGTTCACCTCTGCGTCGACGAAGGCTGCCAATGGTCAATGTGGTATCAATTGCTAG 3726 45.46 MEANAGLVAGSYKRNELVRIRHDSDNGPKPLKNINSQICQICGDTVGLTASGDIFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVSSEIPYATPDNQSVRTTSGSLGPPDKHLHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNIMQMTSRYSEGKGDLEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKDAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPDYVIMHPFQCCVSRVKKRKSLRSAVLFQVSSEIPYATPDNQSVRTTSGSLGPPDKHLHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNIMQMTSRYSEGKGDLEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKDAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFESLSETAEFARKWVPFCKKHSIEPRAPEFYFAQKIDYLKDKIKPSFVKERRAMKREYEEFKIRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGLQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIIIKSCCGSRKKHRNKKYVDKKRAAKRTESTIPIFNMEDIVEGYDDESSLLMSQKRIEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCTLPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIINMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSASTKAANGQCGINC 1241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2585423 2596506 - Cp4.1LG02g04140.1 Cpe02g00458 464407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00458 1241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 111 IPR013083 -
Cpe02g00458 1241 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Cpe02g00458 1241 Pfam Cellulose synthase 537 1232 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe02g00458 1241 MobiDBLite consensus disorder prediction 342 366 - -
Cpe02g00458 1241 SUPERFAMILY Nucleotide-diphospho-sugar transferases 551 1057 IPR029044 -
Cpe02g00458 1241 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Cpe02g00458 1241 MobiDBLite consensus disorder prediction 74 146 - -
Cpe02g00458 1241 PANTHER CELLULOSE SYNTHASE 144 321 - -
Cpe02g00458 1241 PANTHER CELLULOSE SYNTHASE 364 1241 - -
Cpe02g00458 1241 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 695 832 IPR029044 -
Cpe02g00458 1241 SUPERFAMILY RING/U-box 22 110 - -
Cpe02g00458 1241 PANTHER CELLULOSE SYNTHASE 19 107 - -
Cpe02g00458 1241 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 19 107 - -
Cpe02g00458 1241 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Cpe02g00458 1241 Coils Coil 635 655 - -
Cpe02g00458 1241 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 364 1241 - -
Cpe02g00458 1241 MobiDBLite consensus disorder prediction 111 126 - -
Cpe02g00458 1241 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 144 321 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00458 Cpe06g00347 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00458 Cpe-Chr2:2585423 Cpe19g00060 Cpe-Chr19:447906 2.88E-86 dispersed
Cpe14g00448 Cpe-Chr14:2802262 Cpe02g00458 Cpe-Chr2:2585423 9.26E-31 dispersed
Cpe02g00458 Cpe-Chr2:2585423 Cpe06g00347 Cpe-Chr6:1929692 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00458 K10999 - csv:101205724 1809.65