Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00466 ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACTTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCTAAAATTTATGCTCCTGAGTTATGCGTAGGGGTTATTGGAAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGTTGTTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAGGCAGTTTAG 480 47.71 MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPELCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2640372 2642295 - Cp4.1LG02g03960.1 Cpe02g00466 464415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00466 159 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 104 156 - -
Cpe02g00466 159 CDD ATP-synt_Vo_c_ATP6F_rpt2 100 148 - -
Cpe02g00466 159 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Cpe02g00466 159 Pfam ATP synthase subunit C 105 148 IPR002379 GO:0015078|GO:0033177|GO:1902600
Cpe02g00466 159 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Cpe02g00466 159 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 7 103 - -
Cpe02g00466 159 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 7 103 - -
Cpe02g00466 159 Gene3D - 23 155 IPR035921 -
Cpe02g00466 159 PRINTS Vacuolar ATP synthase 16kDa subunit signature 66 89 IPR000245 GO:0033179|GO:0046961|GO:1902600
Cpe02g00466 159 PRINTS Vacuolar ATP synthase 16kDa subunit signature 39 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Cpe02g00466 159 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Cpe02g00466 159 SUPERFAMILY F1F0 ATP synthase subunit C 104 149 IPR035921 -
Cpe02g00466 159 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 104 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00466 Cpe-Chr2:2640372 Cpe07g00275 Cpe-Chr7:1822398 1.39E-88 dispersed
Cpe11g00349 Cpe-Chr11:1892479 Cpe02g00466 Cpe-Chr2:2640372 4.55E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00466 K03661 - tcc:18588964 261.922