Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00470 | ATGGCGTATCACAATCCCCTCTCCCACGACCTTCCCCTCCACTTCTCCGACCAACAACCGCCGCAGAATCAACCACTTTCCGATGCCTCTTTGCGTACCATTCTCCCGGACCCCAAATCCCACCACCACCACCACCACCCGCCGCAAACGGCACCGAATTGGCTTAACAACGCACTTCTCCGTAACCAAAACCCCCATTCTCACTACTCTACCGACACTACCACCACCGCCACCGCCGCCGTCAATACCAATTTCCTCAACCTTCACACCACAGCATCCGATTCCACTGTTTCTCACTCGTCTAACCAATGGCTCTCCCGTCCGATTCTCCAGAGAAACCACAGCGATGTTATTGATGATGTCGCCACCGCCGGTGACGCTATGATCGGTGCCGCTAATGATGCCAATAGCGGCGATGGATTGAACAAAAGCGACGGCATGACGGTGGAACCTGGCGGCGGCGGTAGTGGTGGTGGTGGAGAAGGGGTTTTGAATTGGCAATATGCTCGTTACAAAGCCGAGATTCTTGCTCATCCGCTTTATGAACAGCTGCTTTCAGCTCATGTCGCTTGTCTTCGTATCGCCACGCCCGTCGACCAATTGCCGAGGATTGACGCGCAGCTCGCTCAGTCTCAGAATGTTGTCGCTAAGTACTCCGCCTTGGGCCACACCGCGCCGCTCATGGTCGGCGACGACAAAGACCTCGATCAATTCATGACGCATTATGTTCTTTTGCTTTGTTCGTTCAAAGAACAACTCCAGCAACATGTTCGTGTCCATGCCATGGAAGCTGTAATGGCTTGCTGGGACATCGAGCAGTCGCTTCAAAGCTTAACAGGAGTTTCACCCGGCGAAGGCACGGGAGCGACAATGTCAGACGACGACGACGACCAGGTCGATAGCGATGCAAATTTGTTCGAAGCGAGCTTAGATTGTCCTGACACCATGGGATTTGGGCCTCTTATTCCCACAGAAACTGAGAGGTCCTTGATGGAAAGGGTCAGACAAGAACTGAAGCATGAATTAAAAGCGGGTTACAAGGAGAAAATTGTGGATATAAGGGAAGAAATTCTGAGAAAAAGGAGAGCTGGAAAGCTCCCTGGTGATACCACCTCTGTTCTAAAACAATGGTGGCAATCACATTCAAAGTGGCCTTATCCTACTGTAAGTTGA | 1173 | 51.83 | MAYHNPLSHDLPLHFSDQQPPQNQPLSDASLRTILPDPKSHHHHHHPPQTAPNWLNNALLRNQNPHSHYSTDTTTTATAAVNTNFLNLHTTASDSTVSHSSNQWLSRPILQRNHSDVIDDVATAGDAMIGAANDANSGDGLNKSDGMTVEPGGGGSGGGGEGVLNWQYARYKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHTAPLMVGDDKDLDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFEASLDCPDTMGFGPLIPTETERSLMERVRQELKHELKAGYKEKIVDIREEILRKRRAGKLPGDTTSVLKQWWQSHSKWPYPTVS | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2662202 | 2664990 | - | Cp4.1LG02g04000.1 | Cpe02g00470 | 464419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00470 | 390 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 39 | 388 | - | - | |
Cpe02g00470 | 390 | Gene3D | - | 358 | 390 | - | - | |
Cpe02g00470 | 390 | SMART | ELK_2 | 337 | 358 | IPR005539 | GO:0003677 | |
Cpe02g00470 | 390 | PANTHER | CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN | 39 | 388 | - | - | |
Cpe02g00470 | 390 | Pfam | KNOX1 domain | 171 | 212 | IPR005540 | GO:0003677|GO:0005634 | |
Cpe02g00470 | 390 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Cpe02g00470 | 390 | SMART | KNOX2_2 | 225 | 280 | IPR005541 | GO:0003677|GO:0005634 | |
Cpe02g00470 | 390 | ProSiteProfiles | ELK domain profile. | 337 | 357 | IPR005539 | GO:0003677 | |
Cpe02g00470 | 390 | Pfam | KNOX2 domain | 229 | 279 | IPR005541 | GO:0003677|GO:0005634 | |
Cpe02g00470 | 390 | Pfam | ELK domain | 337 | 358 | IPR005539 | GO:0003677 | |
Cpe02g00470 | 390 | SMART | KNOX1_2 | 169 | 213 | IPR005540 | GO:0003677|GO:0005634 | |
Cpe02g00470 | 390 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00470 | Cpe-Chr2:2662202 | Cpe11g00311 | Cpe-Chr11:1683405 | 0 | dispersed | |
Cpe02g00470 | Cpe-Chr2:2662202 | Cpe06g00313 | Cpe-Chr6:1740266 | 0 | wgd | |
Cpe02g00470 | Cpe-Chr2:2662202 | Cpe07g00308 | Cpe-Chr7:1998675 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00470 | - | - | bhj:120085761 | 659.448 |