Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00479 ATGCCGCACAGAACGACTTATTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCAGCGTCAACTTCCAAACAGATTTTGGATCACGAGAAGAAAATCAACAAGGACACTTTAAGTACCGAAAGTGACGCGAAACCGACCCCGCGGCCTGCTCGCGACTTTAGTGTCACGAAGAGTTCAGCTGTATCGGATCTTTTCACGGGGGACAAGTCTCAAAGCAAGAAGAAACTGCCTGCTCTTTACGATTGGTTGGTGAACAAGAAAGCAACACGATCAGCAACCGCTCACGTGAAAACTTGGCTTTCCAATTGCGATGAGGACCGCGAGCTTTTGCTTCCTCCACCTACCTCGGAACCAGATCATGATACAAAGAATGTTGAGGATCGGAGTGTTGACCGGCGCTTTGACCGGGAAGTTTCACTGCCTAGATTATCAAGCGGGAGTAGCTATGCAGGGAGTTTGTTTTCAGGCACGGGAACGGGGACTGTGGATGGGAACTTTTCCAGCGATATTAAGGATTCATCGGTGTCGAAGATATTGTCCACGCGCACGGCGAGACCGGAAGAGATTGTGGATGGAGATGGTGAGGAAAGCCTAGCGCAAAGAACGAAAGAGAGTTATTACCTGCAACTCGCTTTGGCTGCAACGCTTCGTTCTCATGCTAGTCTCGCTGGCGATCCCGTGCTTATGGAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTATGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATTTCCGATGGTTTCTACAATATTTTGGGTATGAACCCGTATCTTTGGGTTATGTGCAATGATTTTGAGGAAGGTAGACGGCTACCACCTCTGATGTCACTTAAAACCATTGAACCGAGTGAGACGTCAATGGAGGTGGTTCTTGTGGATAGACGTGGGGACTCTCGACTGAAGGAGCTTGAAGAGAAAGCACAAGAACTATATTGTGCTTCAGAGAACACCTTAGTGTTGGTGGAAAAACTAGGAAAACTTGTTGCGATCTACATGGGGGGCACTTTCCCGGTGGAGCAAGGGGGTTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTTCAGCAATGCATTGTGCTACCAATCGGTAGTCTATCTATGGGATTATGCAGGCACCGTGCAATACTTTTTAAGAAATTGGCAGATTATATAGGTTTGCCGTGTCGGATAGCTAAAGGTTGTATGTACTGTGTTGCTGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCAGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGCTCCAATCTTCAATACCTTCACCACTTCACATTTCTCATTTAAAAGAGTTCCAAGAACCTTACGTGGAAAGTTGTTTAAGCCGTCAAATTGTTGGGTCAAAGCAAACCTGTGGTTCTCCTGATAATCCTCTACATTCAGGTCTTGGAGAGTGCCGGATGAGAGGGGGAAGCACGTTATATAAAAATTCAGGGACTGGAACTGATAAATTGGTTGATCAAGCTGTCGGTATGAGATCATCTCTGCTGTGTTTGGAAACTAAAGTGAGCGAGGAGTGTGTGCTTCAGAGTCATATATTGGCACCCACTGACGCTGATGCCTCTAAGAACTTGGGTTCTGTTGCTGGTGCATCTTTACATGAAAACGCAGTTGTCATTGAAGAAATATACAGAAAAGAGGAAGTTGTGGTGGGAATTTCACTCGATGAATCTAGCATTGATCCGTCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAAGAGGTTGAGAGTAGGTCTCGAAGTTGTTCAGCATCAACACATCCAAAATATCTGATACTTGAACCATCTCTTGCAATGGATTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGAACAGTGCACCGTGCTGAATGGCATGGATCGGTTGCAATAATGAAGCGGGTCCGCCATCCGAATGTGGTACTCTTCATGGGTGCAGTTACTAAGAAACCTCATCTTTCAATAGTGACTGAATATCTGCCTAGGGGTAGTCTATACCGCCTAATTCACAGGCCATCCTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGAATGGCGTTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCCATAGTACACTGGGATCTTAAATCCCCCAATTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGCGACTTTGGGTTGTCCAGATTCAAAGCCAACACTTTCATATCATCGAAATCTGTAGCTGGAACTCCTGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCAAATGAGAAGACTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTCACCATGCAACAACCGTGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATACCACCAAACACTTCCCCGTTGGTGTCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCATTTACAAGTATAGTCGAGTCCCTGAAGAAATTGCTCAAATGTCCTCAGCAGTTGATAGTAATGGGAGGAACGTGA 2706 45.79 MPHRTTYFFPRQFPDRGFDSASTSKQILDHEKKINKDTLSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKSQSKKKLPALYDWLVNKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPDHDTKNVEDRSVDRRFDREVSLPRLSSGSSYAGSLFSGTGTGTVDGNFSSDIKDSSVSKILSTRTARPEEIVDGDGEESLAQRTKESYYLQLALAATLRSHASLAGDPVLMEEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDFEEGRRLPPLMSLKTIEPSETSMEVVLVDRRGDSRLKELEEKAQELYCASENTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQQCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIAKGCMYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGLQSSIPSPLHISHLKEFQEPYVESCLSRQIVGSKQTCGSPDNPLHSGLGECRMRGGSTLYKNSGTGTDKLVDQAVGMRSSLLCLETKVSEECVLQSHILAPTDADASKNLGSVAGASLHENAVVIEEIYRKEEVVVGISLDESSIDPSKLSLSTQTDSKEVESRSRSCSASTHPKYLILEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSVAIMKRVRHPNVVLFMGAVTKKPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKTDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPNTSPLVSSLIESCWADDPVQRPSFTSIVESLKKLLKCPQQLIVMGGT 901
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2721160 2730381 - Cp4.1LG02g03990.1 Cpe02g00479 464428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00479 901 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cpe02g00479 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Cpe02g00479 901 Gene3D Phosphorylase Kinase; domain 1 641 678 - -
Cpe02g00479 901 MobiDBLite consensus disorder prediction 19 59 - -
Cpe02g00479 901 MobiDBLite consensus disorder prediction 25 40 - -
Cpe02g00479 901 CDD STKc_MAP3K-like 660 885 - -
Cpe02g00479 901 ProSitePatterns Protein kinases ATP-binding region signature. 660 681 IPR017441 GO:0005524
Cpe02g00479 901 SMART serkin_6 654 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00479 901 MobiDBLite consensus disorder prediction 109 129 - -
Cpe02g00479 901 PRINTS Tyrosine kinase catalytic domain signature 705 718 IPR001245 GO:0004672|GO:0006468
Cpe02g00479 901 PRINTS Tyrosine kinase catalytic domain signature 812 834 IPR001245 GO:0004672|GO:0006468
Cpe02g00479 901 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Cpe02g00479 901 PRINTS Tyrosine kinase catalytic domain signature 746 764 IPR001245 GO:0004672|GO:0006468
Cpe02g00479 901 Pfam Protein tyrosine and serine/threonine kinase 677 885 IPR001245 GO:0004672|GO:0006468
Cpe02g00479 901 ProSiteProfiles Protein kinase domain profile. 654 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00479 901 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 676 - -
Cpe02g00479 901 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 108 676 - -
Cpe02g00479 901 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 677 899 - -
Cpe02g00479 901 SUPERFAMILY Protein kinase-like (PK-like) 624 884 IPR011009 -
Cpe02g00479 901 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 677 899 - -
Cpe02g00479 901 Gene3D Phosphorylase Kinase; domain 1 679 712 - -
Cpe02g00479 901 Gene3D Transferase(Phosphotransferase) domain 1 713 895 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00479 Cpe06g00457 CCT
Cpe02g00479 Cpe06g00457 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00479 Cpe-Chr2:2721160 Cpe08g01046 Cpe-Chr8:7996171 9.19E-154 dispersed
Cpe02g00479 Cpe-Chr2:2721160 Cpe06g00457 Cpe-Chr6:2662617 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62208 PF07714 PK_Tyr_Ser-Thr 1.70E-51 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00479 - - csv:101204522 1587.39