Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00486 AAGAATCGAGTTTCGGATCTAAGAATGGGGAGAGGCAAGATTGTAATTAGGAGGATCGATAATTCGACGAGCAGACAGGTGACTTTCTCGAAGCGAAGGAGTGGACTGCTGAAGAAGGCGAAAGAACTGGCGATCCTTTGTGACGCCGATGTTGGAGTCATCATCTTCTCCAGCACCAGCAAGCTTTATGAATACTCCAGCACCAGCATGAAAACACTAATAGAACGATATCACAAGACAAAAGAGGAGCACCATCAGCTTGGGGTCTCGACTTCAGAAGTCAAGTACTGGCAAAGGGAAGCAGCAATGTTACGGCAACAACTGCAGAGCTTACAAGAAAATCATCGGCAGATGATGGGTGAAGAGCTGACTGGTCTGAGTGTCAAAGATCTACAGAATCTAGAAAACCAACTGGAGATAAGTCTCCGTGGTGTCCGTATGAAGAAGGATCAAATCTTAATGGATGAGATACAAGAACTAAACAGAAAGGGAAACCTAATTCACCAAGGCAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAATCTGGAATTATACCAAAAGGTCTATGGAACAAAGGATGCCAAGGGGGCAAGCAGTCTTACAAATGGCCTGGGTGTGGGAGAGGATGCAGTTATACCTATCAGCCTTCAACTCAGCCAACCACAACAACAAAACCTTGAGGCACCAGAAAAAGCAACAAAACTGGGGTACAGTTGCGACAAAATGCATAAATGTTCAATAATGCGTACAAATGAACTTTTCCAAAGTCAGTATTCCAATCTTGTTCTTTTGATGGTTGCAGCAGACTACAACTACGCTAGCAAAAAGAGACCTTACACCAACCAGGAAGATCTCGCTTGGTGTTTCTTATTGTAG 888 43.24 KNRVSDLRMGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSSTSMKTLIERYHKTKEEHHQLGVSTSEVKYWQREAAMLRQQLQSLQENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQGNMELYKKVNLIRQENLELYQKVYGTKDAKGASSLTNGLGVGEDAVIPISLQLSQPQQQNLEAPEKATKLGYSCDKMHKCSIMRTNELFQSQYSNLVLLMVAADYNYASKKRPYTNQEDLAWCFLL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2793523 2806151 + Cp4.1LG02g03920.1 Cpe02g00486 464435

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00486 295 PANTHER SERUM RESPONSE FACTOR HOMOLOG 9 239 - -
Cpe02g00486 295 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 18 65 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 ProSitePatterns MADS-box domain signature. 11 65 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 Pfam K-box region 91 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cpe02g00486 295 SMART madsneu2 9 68 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 CDD MADS_MEF2_like 10 86 IPR033896 GO:0000977|GO:0045944
Cpe02g00486 295 ProSiteProfiles K-box domain profile. 94 184 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cpe02g00486 295 Coils Coil 94 121 - -
Cpe02g00486 295 SUPERFAMILY SRF-like 10 97 IPR036879 GO:0003677|GO:0046983
Cpe02g00486 295 ProSiteProfiles MADS-box domain profile. 9 69 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 Gene3D - 21 100 IPR036879 GO:0003677|GO:0046983
Cpe02g00486 295 PRINTS MADS domain signature 31 46 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 PRINTS MADS domain signature 46 67 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 PRINTS MADS domain signature 11 31 IPR002100 GO:0003677|GO:0046983
Cpe02g00486 295 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 9 239 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00486 K09264 K09264; MADS-box transcription factor, plant - csv:101203545 390.963
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe02g00486 Cpe06g00463 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00370 Cpe-Chr1:2125778 Cpe02g00486 Cpe-Chr2:2793523 1.99E-91 dispersed
Cpe02g00486 Cpe-Chr2:2793523 Cpe06g00463 Cpe-Chr6:2711981 8.77E-80 dispersed
Cpe14g00235 Cpe-Chr14:1356557 Cpe02g00486 Cpe-Chr2:2793523 5.52E-29 dispersed
Cpe02g01566 Cpe-Chr2:13262616 Cpe02g00486 Cpe-Chr2:2793523 9.73E-43 transposed
Cpe10g01202 Cpe-Chr10:8964083 Cpe02g00486 Cpe-Chr2:2793523 6.84E-40 transposed
Cpe10g00528 Cpe-Chr10:3096610 Cpe02g00486 Cpe-Chr2:2793523 2.66E-78 wgd
Cpe02g00486 Cpe-Chr2:2793523 Cpe06g00461 Cpe-Chr6:2701913 2.14E-28 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g548 . . . . Bpe02g00148 . . . . . Cma01g01466 Cma09g00600 . . . Cpe06g00463 . . . . . . . . . . . . . . . Cone4ag1281 . . Cone20ag0564 Lsi04g02291 Csa03g04509 Chy04g00194 . . . . . Bpe02g01163 Bpe14g00493 . Bma02g00105 . Cmo01g01520 Cmo09g00589 . . . Car09g00532 . Cpe02g00486 Bhi09g02527 . . . . . . Cla05g02127 Cam05g2281 Cec05g2304 Cco05g2345 Clacu05g2278 Cmu05g2141 Cre05g2263 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe19g01096 CCT,CST 7 230 MADS-box Gene Family AT3G58780 64.4 1.2e-74 276.9
Cpe10g00122 CCT 7 229 MADS-box Gene Family AT3G58780 64.4 2.1e-74 276.2
Cpe02g01021 . 1 182 MADS-box Gene Family AT3G58780 68.1 4.0e-65 245.4
Cpe20g00485 CCT,CST 28 185 MADS-box Gene Family AT3G58780 59.7 1.6e-53 206.8
Cpe16g00732 . 1 173 MADS-box Gene Family AT3G58780 52.0 8.6e-52 201.1
Cpe09g01156 . 1 175 MADS-box Gene Family AT1G26310 70.1 8.9e-65 244.2
Cpe20g00089 CCT,ECH 1 167 MADS-box Gene Family AT1G26310 71.0 2.9e-63 239.2
Cpe07g00093 . 192 365 MADS-box Gene Family AT1G26310 63.3 1.8e-57 219.9
Cpe02g01396 CCT,ECH 1 205 MADS-box Gene Family AT1G26310 58.9 5.2e-57 218.4
Cpe03g00969 CCT,ECH 1 215 MADS-box Gene Family AT1G26310 52.5 4.4e-56 215.3
Cpe02g01397 CCT,ECH 1 196 MADS-box Gene Family AT1G26310 52.2 6.7e-44 174.9
Cpe09g01155 CCT,ECH 1 175 MADS-box Gene Family AT1G26310 55.7 4.8e-42 168.7
Cpe03g00970 CCT,ECH 29 195 MADS-box Gene Family AT1G26310 55.3 4.0e-41 165.6
Cpe17g00325 . 1 140 MADS-box Gene Family AT1G26310 61.0 3.2e-38 156.0
Cpe02g01021 . 1 195 MADS-box Gene Family AT4G09960 71.6 1.7e-75 279.6
Cpe10g00122 CCT 9 184 MADS-box Gene Family AT4G09960 74.4 1.5e-66 250.0
Cpe19g01096 CCT,CST 9 199 MADS-box Gene Family AT4G09960 68.7 2.5e-66 249.2
Cpe20g00485 CCT,CST 28 177 MADS-box Gene Family AT4G09960 61.8 3.0e-51 199.1
Cpe16g00732 . 1 131 MADS-box Gene Family AT4G09960 54.7 4.3e-42 168.7
Cpe06g01008 . 1 181 MADS-box Gene Family AT1G71692 52.8 8.5e-45 177.6
Cpe17g00325 . 1 140 MADS-box Gene Family AT3G61120 65.0 2.9e-44 176.0
Cpe17g01070 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.3e-41 166.4
Cpe03g00970 CCT,ECH 29 197 MADS-box Gene Family AT3G61120 53.8 5.6e-40 161.8
Cpe09g01155 CCT,ECH 1 175 MADS-box Gene Family AT3G61120 50.9 2.6e-37 152.9
Cpe20g00089 CCT,ECH 1 166 MADS-box Gene Family AT3G61120 51.5 4.4e-37 152.1
Cpe09g01156 . 1 168 MADS-box Gene Family AT3G61120 50.9 7.5e-37 151.4
Cpe13g00187 CCT,CST,ECH 1 208 MADS-box Gene Family AT4G11880 60.6 1.6e-54 209.9
Cpe17g00324 CCT,ECH 1 216 MADS-box Gene Family AT4G11880 53.9 2.7e-49 192.6
Cpe05g00296 CCT 1 197 MADS-box Gene Family AT4G11880 53.3 3.3e-47 185.7
Cpe03g01699 . 10 180 MADS-box Gene Family AT4G11880 60.2 7.5e-44 174.5
Cpe13g00055 . 1 193 MADS-box Gene Family AT4G11880 50.7 2.1e-38 156.4
Cpe09g01155 CCT,ECH 1 174 MADS-box Gene Family AT4G11880 50.6 4.0e-37 152.1
Cpe02g01566 . 1 235 MADS-box Gene Family AT5G13790 52.4 2.7e-51 199.5
Cpe02g00486 CCT 59 241 MADS-box Gene Family AT3G57230 58.9 5.8e-38 154.8
Cpe02g00486 CCT 9 227 MADS-box Gene Family AT2G22630 64.9 1.2e-57 220.3
Cpe01g00370 CST 8 232 MADS-box Gene Family AT2G22630 56.4 1.0e-51 200.7
Cpe10g00528 . 1 157 MADS-box Gene Family AT2G22630 63.8 3.0e-48 189.1
Cpe10g01202 . 1 173 MADS-box Gene Family AT3G57390 50.8 3.0e-40 162.5
Cpe13g00187 CCT,CST,ECH 1 208 MADS-box Gene Family AT4G22950 62.3 1.1e-58 223.8
Cpe17g00324 CCT,ECH 1 216 MADS-box Gene Family AT4G22950 54.6 1.7e-51 199.9
Cpe05g00296 CCT 1 202 MADS-box Gene Family AT4G22950 53.9 6.3e-51 198.0
Cpe03g01699 . 10 180 MADS-box Gene Family AT4G22950 59.8 1.4e-45 180.3
Cpe08g00501 CCT,CST,ECH 1 196 MADS-box Gene Family AT4G22950 50.5 3.0e-45 179.1
Cpe05g00693 CCT,ECH 1 164 MADS-box Gene Family AT4G22950 57.3 2.9e-40 162.5
Cpe02g01397 CCT,ECH 1 246 MADS-box Gene Family AT5G15800 72.2 7.7e-96 347.4
Cpe03g00970 CCT,ECH 29 302 MADS-box Gene Family AT5G15800 65.6 8.8e-92 334.0
Cpe17g01070 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.8e-73 273.1
Cpe09g01155 CCT,ECH 1 262 MADS-box Gene Family AT5G15800 53.3 1.0e-60 230.7
Cpe02g01396 CCT,ECH 1 175 MADS-box Gene Family AT5G15800 53.1 3.7e-42 169.1
Cpe17g00325 . 1 140 MADS-box Gene Family AT5G15800 66.4 4.9e-42 168.7
Cpe09g01156 . 1 174 MADS-box Gene Family AT5G15800 53.4 6.4e-42 168.3
Cpe20g00089 CCT,ECH 1 165 MADS-box Gene Family AT5G15800 55.2 5.4e-41 165.2
Cpe17g00324 CCT,ECH 1 161 MADS-box Gene Family AT2G45660 70.2 2.9e-53 205.3
Cpe03g01699 . 10 168 MADS-box Gene Family AT2G45660 67.9 1.0e-50 196.8
Cpe13g00187 CCT,CST,ECH 1 159 MADS-box Gene Family AT2G45660 64.2 4.7e-48 188.0
Cpe08g00501 CCT,CST,ECH 1 155 MADS-box Gene Family AT2G45660 63.5 3.7e-45 178.3
Cpe05g00296 CCT 1 151 MADS-box Gene Family AT2G45660 62.9 1.1e-44 176.8
Cpe05g00693 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 60.1 3.9e-42 168.3
Cpe13g00055 . 1 156 MADS-box Gene Family AT2G45660 58.3 4.7e-40 161.4
Cpe02g00486 CCT 9 238 MADS-box Gene Family AT4G37940 58.1 5.4e-55 211.5
Cpe01g00370 CST 8 162 MADS-box Gene Family AT4G37940 63.9 2.1e-51 199.5
Cpe10g00528 . 1 152 MADS-box Gene Family AT4G37940 63.9 1.2e-46 183.7
Cpe10g00536 . 44 270 MADS-box Gene Family AT2G22540 63.6 7.8e-71 264.2
Cpe07g00167 . 1 223 MADS-box Gene Family AT2G22540 55.3 8.4e-57 217.6
Cpe19g00176 . 1 153 MADS-box Gene Family AT2G22540 59.0 1.1e-40 164.1
Cpe14g00230 CST 1 152 MADS-box Gene Family AT2G22540 56.4 3.3e-37 152.5
Cpe10g00536 . 44 267 MADS-box Gene Family AT4G24540 56.9 1.6e-57 219.9
Cpe07g00167 . 1 223 MADS-box Gene Family AT4G24540 56.0 3.8e-56 215.3
Cpe02g01397 CCT,ECH 1 171 MADS-box Gene Family AT2G03710 66.9 2.9e-57 218.8
Cpe03g00970 CCT,ECH 29 196 MADS-box Gene Family AT2G03710 67.5 8.6e-57 217.2
Cpe17g01070 . 1 176 MADS-box Gene Family AT2G03710 63.8 4.0e-54 208.4
Cpe09g01155 CCT,ECH 1 173 MADS-box Gene Family AT2G03710 61.6 2.7e-50 195.7
Cpe17g00325 . 1 173 MADS-box Gene Family AT2G03710 51.6 2.6e-37 152.5
Cpe01g00971 . 1 127 MADS-box Gene Family AT2G03710 51.4 4.4e-37 151.8
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT2G03710 52.2 5.8e-37 151.4
Cpe02g01396 CCT,ECH 1 173 MADS-box Gene Family AT2G03710 50.6 9.9e-37 150.6
Cpe02g01397 CCT,ECH 1 170 MADS-box Gene Family AT3G02310 84.8 2.0e-75 279.3
Cpe03g00970 CCT,ECH 29 197 MADS-box Gene Family AT3G02310 85.9 2.6e-75 278.9
Cpe17g01070 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.5e-67 253.1
Cpe09g01155 CCT,ECH 1 172 MADS-box Gene Family AT3G02310 65.1 3.0e-55 212.2
Cpe01g00971 . 1 123 MADS-box Gene Family AT3G02310 60.2 2.1e-45 179.5
Cpe17g00325 . 1 137 MADS-box Gene Family AT3G02310 65.7 8.3e-42 167.5
Cpe02g01396 CCT,ECH 1 181 MADS-box Gene Family AT3G02310 52.5 1.4e-41 166.8
Cpe20g00089 CCT,ECH 1 165 MADS-box Gene Family AT3G02310 56.4 1.4e-41 166.8
Cpe09g01156 . 1 171 MADS-box Gene Family AT3G02310 53.8 5.4e-41 164.9
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT3G02310 55.7 8.6e-39 157.5
Cpe05g00693 CCT,ECH 1 142 MADS-box Gene Family AT5G62165 66.2 1.7e-47 186.0
Cpe13g00055 . 1 146 MADS-box Gene Family AT5G62165 66.4 1.7e-47 186.0
Cpe13g00187 CCT,CST,ECH 1 154 MADS-box Gene Family AT5G62165 61.7 2.0e-43 172.6
Cpe17g00324 CCT,ECH 1 153 MADS-box Gene Family AT5G62165 56.9 2.4e-41 165.6
Cpe03g01699 . 10 155 MADS-box Gene Family AT5G62165 60.3 4.1e-41 164.9
Cpe05g00296 CCT 1 147 MADS-box Gene Family AT5G62165 57.8 3.0e-39 158.7
Cpe08g00501 CCT,CST,ECH 1 141 MADS-box Gene Family AT5G62165 59.2 2.1e-37 152.5
Cpe01g00370 CST 8 243 MADS-box Gene Family AT2G14210 59.9 9.1e-56 214.2
Cpe02g00486 CCT 9 240 MADS-box Gene Family AT2G14210 60.3 5.5e-53 204.9
Cpe10g00528 . 1 139 MADS-box Gene Family AT2G14210 62.2 5.4e-40 161.8
Cpe10g00122 CCT 7 229 MADS-box Gene Family AT2G42830 63.1 1.3e-68 256.9
Cpe19g01096 CCT,CST 7 230 MADS-box Gene Family AT2G42830 63.1 2.9e-68 255.8
Cpe02g01021 . 1 201 MADS-box Gene Family AT2G42830 65.2 7.9e-66 247.7
Cpe20g00485 CCT,CST 28 180 MADS-box Gene Family AT2G42830 61.7 2.4e-54 209.5
Cpe16g00732 . 1 173 MADS-box Gene Family AT2G42830 50.9 2.8e-47 186.0
Cpe02g01396 CCT,ECH 1 169 MADS-box Gene Family AT2G45650 50.9 9.8e-40 161.0
Cpe02g01021 . 1 156 MADS-box Gene Family AT2G45650 53.2 1.1e-38 157.5
Cpe09g01156 . 1 173 MADS-box Gene Family AT2G45650 50.3 1.2e-37 154.1
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT2G45650 52.5 3.5e-37 152.5
Cpe09g01156 . 63 175 MADS-box Gene Family AT1G69120 67.3 7.8e-37 151.0
Cpe13g00055 . 1 146 MADS-box Gene Family AT5G51870 54.6 6.4e-39 157.9
Cpe13g00187 CCT,CST,ECH 1 147 MADS-box Gene Family AT5G51870 55.1 9.3e-38 154.1
Cpe05g00693 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 53.8 1.2e-37 153.7
Cpe13g00055 . 1 193 MADS-box Gene Family AT5G51860 50.5 1.4e-41 166.8
Cpe09g01156 . 1 242 MADS-box Gene Family AT3G30260 50.8 7.2e-51 198.0
Cpe03g00969 CCT,ECH 1 223 MADS-box Gene Family AT3G30260 50.6 1.4e-49 193.7
Cpe20g00089 CCT,ECH 1 200 MADS-box Gene Family AT3G30260 53.7 2.0e-48 189.9
Cpe02g01396 CCT,ECH 1 177 MADS-box Gene Family AT3G30260 59.0 2.8e-47 186.0
Cpe07g00093 . 192 350 MADS-box Gene Family AT3G30260 59.1 1.5e-40 163.7
Cpe09g01156 . 63 175 MADS-box Gene Family AT5G60910 68.1 5.6e-37 151.4
Cpe17g01070 . 1 242 MADS-box Gene Family AT1G24260 73.3 4.1e-88 321.6
Cpe02g01397 CCT,ECH 1 245 MADS-box Gene Family AT1G24260 60.8 1.0e-70 263.8
Cpe03g00970 CCT,ECH 29 301 MADS-box Gene Family AT1G24260 52.7 1.4e-64 243.4
Cpe01g00971 . 1 193 MADS-box Gene Family AT1G24260 53.8 6.6e-54 208.0
Cpe17g00325 . 1 137 MADS-box Gene Family AT1G24260 67.6 3.1e-43 172.6
Cpe03g00969 CCT,ECH 1 161 MADS-box Gene Family AT1G24260 55.2 8.4e-41 164.5
Cpe20g00089 CCT,ECH 1 157 MADS-box Gene Family AT1G24260 54.3 5.4e-40 161.8
Cpe09g01156 . 1 157 MADS-box Gene Family AT1G24260 53.7 1.6e-39 160.2
Cpe02g01396 CCT,ECH 1 158 MADS-box Gene Family AT1G24260 53.8 2.7e-39 159.5
Cpe02g00096 CCT,ECH 1 231 MADS-box Gene Family AT3G54340 59.5 3.5e-68 255.4
Cpe06g00084 CCT,ECH 1 234 MADS-box Gene Family AT3G54340 53.8 1.9e-58 223.0
Cpe06g00605 CCT 1 139 MADS-box Gene Family AT5G20240 70.5 3.0e-52 201.8
Cpe06g00605 CCT 1 139 MADS-box Gene Family AT5G20240 70.5 3.0e-52 201.8
Cpe02g00096 CCT,ECH 1 231 MADS-box Gene Family AT3G54340 59.5 3.5e-68 255.4
Cpe06g00084 CCT,ECH 1 234 MADS-box Gene Family AT3G54340 53.8 1.9e-58 223.0
Cpe19g01096 CCT,CST 7 230 MADS-box Gene Family AT3G58780 64.4 1.2e-74 276.9
Cpe10g00122 CCT 7 229 MADS-box Gene Family AT3G58780 64.4 2.1e-74 276.2
Cpe02g01021 . 1 182 MADS-box Gene Family AT3G58780 68.1 4.0e-65 245.4
Cpe20g00485 CCT,CST 28 185 MADS-box Gene Family AT3G58780 59.7 1.6e-53 206.8
Cpe16g00732 . 1 173 MADS-box Gene Family AT3G58780 52.0 8.6e-52 201.1
Cpe02g01397 CCT,ECH 1 246 MADS-box Gene Family AT5G15800 72.2 7.7e-96 347.4
Cpe03g00970 CCT,ECH 29 302 MADS-box Gene Family AT5G15800 65.6 8.8e-92 334.0
Cpe17g01070 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.8e-73 273.1
Cpe09g01155 CCT,ECH 1 262 MADS-box Gene Family AT5G15800 53.3 1.0e-60 230.7
Cpe02g01396 CCT,ECH 1 175 MADS-box Gene Family AT5G15800 53.1 3.7e-42 169.1
Cpe17g00325 . 1 140 MADS-box Gene Family AT5G15800 66.4 4.9e-42 168.7
Cpe09g01156 . 1 174 MADS-box Gene Family AT5G15800 53.4 6.4e-42 168.3
Cpe20g00089 CCT,ECH 1 165 MADS-box Gene Family AT5G15800 55.2 5.4e-41 165.2
Cpe02g01397 CCT,ECH 1 171 MADS-box Gene Family AT2G03710 66.9 2.9e-57 218.8
Cpe03g00970 CCT,ECH 29 196 MADS-box Gene Family AT2G03710 67.5 8.6e-57 217.2
Cpe17g01070 . 1 176 MADS-box Gene Family AT2G03710 63.8 4.0e-54 208.4
Cpe09g01155 CCT,ECH 1 173 MADS-box Gene Family AT2G03710 61.6 2.7e-50 195.7
Cpe17g00325 . 1 173 MADS-box Gene Family AT2G03710 51.6 2.6e-37 152.5
Cpe01g00971 . 1 127 MADS-box Gene Family AT2G03710 51.4 4.4e-37 151.8
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT2G03710 52.2 5.8e-37 151.4
Cpe02g01396 CCT,ECH 1 173 MADS-box Gene Family AT2G03710 50.6 9.9e-37 150.6
Cpe02g01397 CCT,ECH 1 170 MADS-box Gene Family AT3G02310 84.8 2.0e-75 279.3
Cpe03g00970 CCT,ECH 29 197 MADS-box Gene Family AT3G02310 85.9 2.6e-75 278.9
Cpe17g01070 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.5e-67 253.1
Cpe09g01155 CCT,ECH 1 172 MADS-box Gene Family AT3G02310 65.1 3.0e-55 212.2
Cpe01g00971 . 1 123 MADS-box Gene Family AT3G02310 60.2 2.1e-45 179.5
Cpe17g00325 . 1 137 MADS-box Gene Family AT3G02310 65.7 8.3e-42 167.5
Cpe02g01396 CCT,ECH 1 181 MADS-box Gene Family AT3G02310 52.5 1.4e-41 166.8
Cpe20g00089 CCT,ECH 1 165 MADS-box Gene Family AT3G02310 56.4 1.4e-41 166.8
Cpe09g01156 . 1 171 MADS-box Gene Family AT3G02310 53.8 5.4e-41 164.9
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT3G02310 55.7 8.6e-39 157.5
Cpe10g00122 CCT 7 229 MADS-box Gene Family AT2G42830 63.1 1.3e-68 256.9
Cpe19g01096 CCT,CST 7 230 MADS-box Gene Family AT2G42830 63.1 2.9e-68 255.8
Cpe02g01021 . 1 201 MADS-box Gene Family AT2G42830 65.2 7.9e-66 247.7
Cpe20g00485 CCT,CST 28 180 MADS-box Gene Family AT2G42830 61.7 2.4e-54 209.5
Cpe16g00732 . 1 173 MADS-box Gene Family AT2G42830 50.9 2.8e-47 186.0
Cpe02g01396 CCT,ECH 1 169 MADS-box Gene Family AT2G45650 50.9 9.8e-40 161.0
Cpe02g01021 . 1 156 MADS-box Gene Family AT2G45650 53.2 1.1e-38 157.5
Cpe09g01156 . 1 173 MADS-box Gene Family AT2G45650 50.3 1.2e-37 154.1
Cpe03g00969 CCT,ECH 1 158 MADS-box Gene Family AT2G45650 52.5 3.5e-37 152.5
Cpe09g01156 . 63 175 MADS-box Gene Family AT1G69120 67.3 7.8e-37 151.0
Cpe09g01156 . 63 175 MADS-box Gene Family AT5G60910 68.1 5.6e-37 151.4
Cpe17g01070 . 1 242 MADS-box Gene Family AT1G24260 73.3 4.1e-88 321.6
Cpe02g01397 CCT,ECH 1 245 MADS-box Gene Family AT1G24260 60.8 1.0e-70 263.8
Cpe03g00970 CCT,ECH 29 301 MADS-box Gene Family AT1G24260 52.7 1.4e-64 243.4
Cpe01g00971 . 1 193 MADS-box Gene Family AT1G24260 53.8 6.6e-54 208.0
Cpe17g00325 . 1 137 MADS-box Gene Family AT1G24260 67.6 3.1e-43 172.6
Cpe03g00969 CCT,ECH 1 161 MADS-box Gene Family AT1G24260 55.2 8.4e-41 164.5
Cpe20g00089 CCT,ECH 1 157 MADS-box Gene Family AT1G24260 54.3 5.4e-40 161.8
Cpe09g01156 . 1 157 MADS-box Gene Family AT1G24260 53.7 1.6e-39 160.2
Cpe02g01396 CCT,ECH 1 158 MADS-box Gene Family AT1G24260 53.8 2.7e-39 159.5
Cpe09g01156 . 1 175 MADS-box Gene Family AT1G26310 70.1 8.9e-65 244.2
Cpe20g00089 CCT,ECH 1 167 MADS-box Gene Family AT1G26310 71.0 2.9e-63 239.2
Cpe07g00093 . 192 365 MADS-box Gene Family AT1G26310 63.3 1.8e-57 219.9
Cpe02g01396 CCT,ECH 1 205 MADS-box Gene Family AT1G26310 58.9 5.2e-57 218.4
Cpe03g00969 CCT,ECH 1 215 MADS-box Gene Family AT1G26310 52.5 4.4e-56 215.3
Cpe02g01397 CCT,ECH 1 196 MADS-box Gene Family AT1G26310 52.2 6.7e-44 174.9
Cpe09g01155 CCT,ECH 1 175 MADS-box Gene Family AT1G26310 55.7 4.8e-42 168.7
Cpe03g00970 CCT,ECH 29 195 MADS-box Gene Family AT1G26310 55.3 4.0e-41 165.6
Cpe17g00325 . 1 140 MADS-box Gene Family AT1G26310 61.0 3.2e-38 156.0
Cpe02g01021 . 1 195 MADS-box Gene Family AT4G09960 71.6 1.7e-75 279.6
Cpe10g00122 CCT 9 184 MADS-box Gene Family AT4G09960 74.4 1.5e-66 250.0
Cpe19g01096 CCT,CST 9 199 MADS-box Gene Family AT4G09960 68.7 2.5e-66 249.2
Cpe20g00485 CCT,CST 28 177 MADS-box Gene Family AT4G09960 61.8 3.0e-51 199.1
Cpe16g00732 . 1 131 MADS-box Gene Family AT4G09960 54.7 4.3e-42 168.7
Cpe06g01008 . 1 181 MADS-box Gene Family AT1G71692 52.8 8.5e-45 177.6
Cpe17g00325 . 1 140 MADS-box Gene Family AT3G61120 65.0 2.9e-44 176.0
Cpe17g01070 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.3e-41 166.4
Cpe03g00970 CCT,ECH 29 197 MADS-box Gene Family AT3G61120 53.8 5.6e-40 161.8
Cpe09g01155 CCT,ECH 1 175 MADS-box Gene Family AT3G61120 50.9 2.6e-37 152.9
Cpe20g00089 CCT,ECH 1 166 MADS-box Gene Family AT3G61120 51.5 4.4e-37 152.1
Cpe09g01156 . 1 168 MADS-box Gene Family AT3G61120 50.9 7.5e-37 151.4
Cpe13g00187 CCT,CST,ECH 1 208 MADS-box Gene Family AT4G11880 60.6 1.6e-54 209.9
Cpe17g00324 CCT,ECH 1 216 MADS-box Gene Family AT4G11880 53.9 2.7e-49 192.6
Cpe05g00296 CCT 1 197 MADS-box Gene Family AT4G11880 53.3 3.3e-47 185.7
Cpe03g01699 . 10 180 MADS-box Gene Family AT4G11880 60.2 7.5e-44 174.5
Cpe13g00055 . 1 193 MADS-box Gene Family AT4G11880 50.7 2.1e-38 156.4
Cpe09g01155 CCT,ECH 1 174 MADS-box Gene Family AT4G11880 50.6 4.0e-37 152.1
Cpe02g01566 . 1 235 MADS-box Gene Family AT5G13790 52.4 2.7e-51 199.5
Cpe02g00486 CCT 59 241 MADS-box Gene Family AT3G57230 58.9 5.8e-38 154.8
Cpe02g00486 CCT 9 227 MADS-box Gene Family AT2G22630 64.9 1.2e-57 220.3
Cpe01g00370 CST 8 232 MADS-box Gene Family AT2G22630 56.4 1.0e-51 200.7
Cpe10g00528 . 1 157 MADS-box Gene Family AT2G22630 63.8 3.0e-48 189.1
Cpe10g01202 . 1 173 MADS-box Gene Family AT3G57390 50.8 3.0e-40 162.5
Cpe13g00187 CCT,CST,ECH 1 208 MADS-box Gene Family AT4G22950 62.3 1.1e-58 223.8
Cpe17g00324 CCT,ECH 1 216 MADS-box Gene Family AT4G22950 54.6 1.7e-51 199.9
Cpe05g00296 CCT 1 202 MADS-box Gene Family AT4G22950 53.9 6.3e-51 198.0
Cpe03g01699 . 10 180 MADS-box Gene Family AT4G22950 59.8 1.4e-45 180.3
Cpe08g00501 CCT,CST,ECH 1 196 MADS-box Gene Family AT4G22950 50.5 3.0e-45 179.1
Cpe05g00693 CCT,ECH 1 164 MADS-box Gene Family AT4G22950 57.3 2.9e-40 162.5
Cpe17g00324 CCT,ECH 1 161 MADS-box Gene Family AT2G45660 70.2 2.9e-53 205.3
Cpe03g01699 . 10 168 MADS-box Gene Family AT2G45660 67.9 1.0e-50 196.8
Cpe13g00187 CCT,CST,ECH 1 159 MADS-box Gene Family AT2G45660 64.2 4.7e-48 188.0
Cpe08g00501 CCT,CST,ECH 1 155 MADS-box Gene Family AT2G45660 63.5 3.7e-45 178.3
Cpe05g00296 CCT 1 151 MADS-box Gene Family AT2G45660 62.9 1.1e-44 176.8
Cpe05g00693 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 60.1 3.9e-42 168.3
Cpe13g00055 . 1 156 MADS-box Gene Family AT2G45660 58.3 4.7e-40 161.4
Cpe02g00486 CCT 9 238 MADS-box Gene Family AT4G37940 58.1 5.4e-55 211.5
Cpe01g00370 CST 8 162 MADS-box Gene Family AT4G37940 63.9 2.1e-51 199.5
Cpe10g00528 . 1 152 MADS-box Gene Family AT4G37940 63.9 1.2e-46 183.7
Cpe10g00536 . 44 270 MADS-box Gene Family AT2G22540 63.6 7.8e-71 264.2
Cpe07g00167 . 1 223 MADS-box Gene Family AT2G22540 55.3 8.4e-57 217.6
Cpe19g00176 . 1 153 MADS-box Gene Family AT2G22540 59.0 1.1e-40 164.1
Cpe14g00230 CST 1 152 MADS-box Gene Family AT2G22540 56.4 3.3e-37 152.5
Cpe10g00536 . 44 267 MADS-box Gene Family AT4G24540 56.9 1.6e-57 219.9
Cpe07g00167 . 1 223 MADS-box Gene Family AT4G24540 56.0 3.8e-56 215.3
Cpe05g00693 CCT,ECH 1 142 MADS-box Gene Family AT5G62165 66.2 1.7e-47 186.0
Cpe13g00055 . 1 146 MADS-box Gene Family AT5G62165 66.4 1.7e-47 186.0
Cpe13g00187 CCT,CST,ECH 1 154 MADS-box Gene Family AT5G62165 61.7 2.0e-43 172.6
Cpe17g00324 CCT,ECH 1 153 MADS-box Gene Family AT5G62165 56.9 2.4e-41 165.6
Cpe03g01699 . 10 155 MADS-box Gene Family AT5G62165 60.3 4.1e-41 164.9
Cpe05g00296 CCT 1 147 MADS-box Gene Family AT5G62165 57.8 3.0e-39 158.7
Cpe08g00501 CCT,CST,ECH 1 141 MADS-box Gene Family AT5G62165 59.2 2.1e-37 152.5
Cpe01g00370 CST 8 243 MADS-box Gene Family AT2G14210 59.9 9.1e-56 214.2
Cpe02g00486 CCT 9 240 MADS-box Gene Family AT2G14210 60.3 5.5e-53 204.9
Cpe10g00528 . 1 139 MADS-box Gene Family AT2G14210 62.2 5.4e-40 161.8
Cpe13g00055 . 1 146 MADS-box Gene Family AT5G51870 54.6 6.4e-39 157.9
Cpe13g00187 CCT,CST,ECH 1 147 MADS-box Gene Family AT5G51870 55.1 9.3e-38 154.1
Cpe05g00693 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 53.8 1.2e-37 153.7
Cpe13g00055 . 1 193 MADS-box Gene Family AT5G51860 50.5 1.4e-41 166.8
Cpe09g01156 . 1 242 MADS-box Gene Family AT3G30260 50.8 7.2e-51 198.0
Cpe03g00969 CCT,ECH 1 223 MADS-box Gene Family AT3G30260 50.6 1.4e-49 193.7
Cpe20g00089 CCT,ECH 1 200 MADS-box Gene Family AT3G30260 53.7 2.0e-48 189.9
Cpe02g01396 CCT,ECH 1 177 MADS-box Gene Family AT3G30260 59.0 2.8e-47 186.0
Cpe07g00093 . 192 350 MADS-box Gene Family AT3G30260 59.1 1.5e-40 163.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000442 3 7 2 1 3 2 5 3 3 3 4 3 5 2 3 8 4 5 5 4 3 3 3 3 3 3 3 9 5 2 112
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49007 PF01486 K-box 1.00E-26 No_clan Cpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe02g00486 Cpe_Chr02 FPKM 91.571999 99.928711 49.477688 47.482376 49.15836 47.376324 48.199757 41.590614 42.72427 42.75359