Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00511 ATGTCACAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCAGCAGCAGCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCACCCACTCTACCGCGGCGTCCGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCGCGTAAGAAATCCCGCATTTGGCTGGGCACCTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCTTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCCCACATGGACCCATCCCAGTACTCTGCTTCCGCCGCCAACGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTAGGCACCAATTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAGCGGAGGATGGTAATTTCTTGAGGGATTATTGA 564 57.98 MSQTEEPPTQSISPSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAANDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAEDGNFLRDY 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3017728 3018291 - Cp4.1LG02g03600.1 Cpe02g00511 464460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00511 187 MobiDBLite consensus disorder prediction 1 30 - -
Cpe02g00511 187 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Cpe02g00511 187 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Cpe02g00511 187 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Cpe02g00511 187 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 11 176 - -
Cpe02g00511 187 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 176 - -
Cpe02g00511 187 SMART rav1_2 30 94 IPR001471 GO:0003700|GO:0006355
Cpe02g00511 187 MobiDBLite consensus disorder prediction 1 20 - -
Cpe02g00511 187 CDD AP2 29 90 IPR001471 GO:0003700|GO:0006355
Cpe02g00511 187 ProSiteProfiles AP2/ERF domain profile. 30 88 IPR001471 GO:0003700|GO:0006355
Cpe02g00511 187 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Cpe02g00511 187 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00511 Cpe-Chr2:3017728 Cpe07g01027 Cpe-Chr7:9274513 9.26E-51 dispersed
Cpe07g00216 Cpe-Chr7:1399919 Cpe02g00511 Cpe-Chr2:3017728 1.09E-10 dispersed
Cpe11g00520 Cpe-Chr11:3056639 Cpe02g00511 Cpe-Chr2:3017728 6.73E-14 dispersed
Cpe02g00511 Cpe-Chr2:3017728 Cpe06g00494 Cpe-Chr6:2944013 9.76E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49011 PF00847 AP2 4.00E-14 CL0081 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00511 K09286 - csv:101217333 218.394