Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00511 | ATGTCACAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCAGCAGCAGCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCACCCACTCTACCGCGGCGTCCGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCGCGTAAGAAATCCCGCATTTGGCTGGGCACCTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCTTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCCCACATGGACCCATCCCAGTACTCTGCTTCCGCCGCCAACGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTAGGCACCAATTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAGCGGAGGATGGTAATTTCTTGAGGGATTATTGA | 564 | 57.98 | MSQTEEPPTQSISPSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAANDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAEDGNFLRDY | 187 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3017728 | 3018291 | - | Cp4.1LG02g03600.1 | Cpe02g00511 | 464460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00511 | 187 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cpe02g00511 | 187 | Gene3D | AP2/ERF domain | 30 | 89 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | PRINTS | Ethylene responsive element binding protein signature | 31 | 42 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | PRINTS | Ethylene responsive element binding protein signature | 53 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 11 | 176 | - | - | |
Cpe02g00511 | 187 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 11 | 176 | - | - | |
Cpe02g00511 | 187 | SMART | rav1_2 | 30 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cpe02g00511 | 187 | CDD | AP2 | 29 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | ProSiteProfiles | AP2/ERF domain profile. | 30 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g00511 | 187 | SUPERFAMILY | DNA-binding domain | 30 | 88 | IPR016177 | GO:0003677 | |
Cpe02g00511 | 187 | Pfam | AP2 domain | 29 | 79 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00511 | Cpe-Chr2:3017728 | Cpe07g01027 | Cpe-Chr7:9274513 | 9.26E-51 | dispersed | |
Cpe07g00216 | Cpe-Chr7:1399919 | Cpe02g00511 | Cpe-Chr2:3017728 | 1.09E-10 | dispersed | |
Cpe11g00520 | Cpe-Chr11:3056639 | Cpe02g00511 | Cpe-Chr2:3017728 | 6.73E-14 | dispersed | |
Cpe02g00511 | Cpe-Chr2:3017728 | Cpe06g00494 | Cpe-Chr6:2944013 | 9.76E-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49011 | PF00847 | AP2 | 4.00E-14 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00511 | K09286 | - | csv:101217333 | 218.394 |