Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00516 ATGGAAGAAGTTCTTGATGACGCCGACAAGTTTCGGGCCGAATTCCTTCGAGTTCTGCGTCATCGACGATCTGGAGAAGTTCCGCCGAATGTGAAGCTTTCAAAGCCTATCCAGGATCCTCTGATTCAGGAGGCCAACCCACCAGCCTTGAGTAAGGCAATGGAATCTTGTCCAAAGGAAGATATTAGCAATTTGAAGGACTTGCTTCATGAGGAAAATCTTCATCTGGCTACAGAGGCAAGCTATGAAGGGGAGCAAGGGCAGTTGCCTATATTGATTATAAGCATGAAGGATAGCAAACAGCAAAAGAAACCTGCAATTGTTTTTCTGCACAGTACGAACAAGTGCAAAGAGTGGTTGAGACCATTGCTTGAGGCTTATGCATCGAGGGGATACGTAGCCATTGCCATTGATTCTCGTTACCATGGTGAAAGGGCCAAGAACAAAACCACCTACCGCGATGCTCTTGTATCTTCATGGAAAAGAGGTGATACCATGCCGTTTATATTTGACACGGTATGGGACTTGATCAAATTGGCCGATTACCTGACGAAAAGGGAGGACATTGACCCATGTAGAATAGGAATTACTGGCGAATCTCTTGGAGGAATGCATGCATGGTTTGCTGCTGCTGCCGACACTCGCTATGCCGTGGTTGCCCCCATAATTGGTGTGCAGTGTTTTCGATGGGCCATAGATAACGATAAGTGGCAGGCACGAGTTGAGAGTATAAAACCTGTTTTCGAGGAAGCAAGAATTGAATTAGGCATGAATGAGATCAACAAAGAAGTGGTGACCAAGGTCTGGAATAGGATTGCTCCTGGTTTAGATTCCAAATTTGACTCGATTTATTCAGTTCCAGCTGTTGCATCACGTCCTTTGTTGTTGTTAAATGGTGCAGATGACCCTCGATGTCCAATTGCCGGTTTGGATGCAACTGTATCAAGAACGCAGACAGTTTATCAGAACTTTGGTTGTCCAGAAAATTTTAAGTTCATCGCACAACCTGGGATTGGCCACGCAATGACACCAGAGATGGTGAAAGAAGCTAGCGATTGGTTTGACAGGTTTTTAGGGCAGAGTATCTAA 1089 45.18 MEEVLDDADKFRAEFLRVLRHRRSGEVPPNVKLSKPIQDPLIQEANPPALSKAMESCPKEDISNLKDLLHEENLHLATEASYEGEQGQLPILIISMKDSKQQKKPAIVFLHSTNKCKEWLRPLLEAYASRGYVAIAIDSRYHGERAKNKTTYRDALVSSWKRGDTMPFIFDTVWDLIKLADYLTKREDIDPCRIGITGESLGGMHAWFAAAADTRYAVVAPIIGVQCFRWAIDNDKWQARVESIKPVFEEARIELGMNEINKEVVTKVWNRIAPGLDSKFDSIYSVPAVASRPLLLLNGADDPRCPIAGLDATVSRTQTVYQNFGCPENFKFIAQPGIGHAMTPEMVKEASDWFDRFLGQSI 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3046266 3053370 + Cp4.1LG02g03580.1 Cpe02g00516 464465

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00516 362 SUPERFAMILY alpha/beta-Hydrolases 98 359 IPR029058 -
Cpe02g00516 362 PANTHER ESTERASE YITV-RELATED 5 358 - -
Cpe02g00516 362 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 358 - -
Cpe02g00516 362 Pfam Prolyl oligopeptidase family 127 357 IPR001375 GO:0006508|GO:0008236
Cpe02g00516 362 Gene3D alpha/beta hydrolase 5 361 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00516 - - - cpep:111788064 723.391
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00501 Cpe-Chr6:2983506 Cpe02g00516 Cpe-Chr2:3046266 7.13E-109 transposed
Cpe02g00516 Cpe-Chr2:3046266 Cpe06g00500 Cpe-Chr6:2982337 9.69E-06 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g316 . Blo12g00759 . Bda03g00427 . . Bma04g00402 . . . Cma01g01432 . Car09g00568 . . . . . . . . . . . . . . . . . . . . . . Lsi04g02338 Csa03g04559 Chy04g00143 . . . . . . Bpe04g00393 . . Sed04g0534 Cmo01g01481 Cmo09g00625 Cma09g00643 . . . . Cpe02g00516 Bhi09g02595 Tan01g3944 Cmetu04g1421 . Hepe01g2228 Mch11g0778 . . . . . . . . . . . Cme04g00168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006905 2 1 1 1 1 0 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe02g00516 Cpe_Chr02 FPKM 7.540414 6.986854 18.221703 20.324167 7.867384 6.154571 8.434011 19.99843 20.006203 22.01889