Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00526 ATGAGGGGCGAAGAAGGGAATTTAGCTGAAGAGAATCTTGAAACAAAAGAGGGAACTCCATCTTCAGAGGATGAGAGATACATTCACAAAGTTTCAGTTCCACCAAAGCAGAAACTGTTCCAAGAAATCAAATCTGGAGTGAAAGAAACATTCTTCCCTGATGATCCTCTCCGTTCATTCAAGGATCAAACGAATCGCCGCAAATTTATCCTCGGAATCCGGGCCGTTTTCCCTATACTTGAATGGGGAAGAGATTACAATATCTCCAAGTTTAGAGGAGATGTCATTGCTGGACTCACCATTGCCAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTTGCAAATTTGCCTCCACAGTATGGATTATATTCAAGTTTTGTTCCACCATTAATCTATGCACTTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTGGCTGTTGTTTCTCTCTTGTTGGGGGCAATGCTTCAAACCGAAATCGATTCGGCTACGAACGCAGAAGAATACAGACGGCTGATCTTTACAGCTACATTCTTTGCAGGGATCACACAAGCCACCCTAGGAGTTCTAAGGTTGGGATTCCTAATTGACTTCTTGTCCCATGCTGCTATTGTTGGCTTCATGGGGGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGGATTTCACAAAGAAAACGGATATTATCTCGGTTATGCAGTCGGTATTCAGCACGATGCAACACGGATGGAACTGGCAGACAATAGTGATTGCTGCAACCTTCTTATGCTTTCTTCTATTTGCAAAATTCACTGGGAAGAGGAACAAGAAGCTGTTCTGGGTGCCTGCTATTGCTCCACTCATATCTGTTGTTCTGTCTACCCTTTTGGTTTACCTTACTCGTGCTGATAAGCAAGGGGTTGCAATTGTGAAACACATAAAGAAAGGAATCAATCCCCCATCTGTGAAAGAATTGTATTTCTCAGGTCAATACCTTCTAAAAGGGCTTAAGATCGGTGTCGTGGCGGGTATGGAAGCCGTAGCGATCGGAAGAACGTTCGCTGCAATGAAAGACTATCAAATTGATGGGAACAAGGAAATGGTAGCAATGGGAGTCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCATTCTCTCGATCAGCCGTAAACTACATGGCTGGCTGCCAAACTGCAGTATCCAACATTGTGATGTCCCTTGTAGTAGTCCTAACTCTGGCATTCATCACTCCACTTTTCAAATATACACCAAACGCTATCCTATCTGCTATCATTATAAATGCTGTGATCAACCTGGTTGACTTGCATGCAGCGAAGTTGATATGGAAGATTGATAAATTTGATTTCGTTGCTTGTATGGGAGCCTTCCTCGGTGTCATCTTTTTCTCTGTAGAGATGGGGCTTCTAATTGCGGTATCCATTTCCTTCGCCAAAATCCTTCTACAAGTTACCAGACCACGGACTGCACTTCTTGGAAAGATCCCAAGGACAACCGTTTATAGAAACATACTGCAATATCCTGAAGCAACCAAAGTTCCTGGCATTTTGATTGTGAGAGTTGATTCAGCCATTTACTTTTCCAACTCGAATTACATCAAGGAAAGATGGCTAGTTGATGAGGAAGAATTAACAAAAGAGTCCTACCAGAACAAAATCCAGTTTCTAATAGTTGAAATGTCACCTGTCACTGACATAGACACAAGTGGCATACATGCTTTGGAAGAGCTAAATGGAAGTCTCAAGAAACGAGAAATACAGCTGATTCTAGCCAATCCAGGGCCCGTGGTGATCCACAAGCTTCACGCATCAGAGTTCGCAGATTTGATAGGACAAGACCATATCTTTCTCACAGTAGCAGATGCAGTATCATCGTGCAGTCCTAAGATAATGAACGATGTTTGA 1944 42.95 MRGEEGNLAEENLETKEGTPSSEDERYIHKVSVPPKQKLFQEIKSGVKETFFPDDPLRSFKDQTNRRKFILGIRAVFPILEWGRDYNISKFRGDVIAGLTIASLCIPQDIGYAKLANLPPQYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGAMLQTEIDSATNAEEYRRLIFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKDFTKKTDIISVMQSVFSTMQHGWNWQTIVIAATFLCFLLFAKFTGKRNKKLFWVPAIAPLISVVLSTLLVYLTRADKQGVAIVKHIKKGINPPSVKELYFSGQYLLKGLKIGVVAGMEAVAIGRTFAAMKDYQIDGNKEMVAMGVMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSLVVVLTLAFITPLFKYTPNAILSAIIINAVINLVDLHAAKLIWKIDKFDFVACMGAFLGVIFFSVEMGLLIAVSISFAKILLQVTRPRTALLGKIPRTTVYRNILQYPEATKVPGILIVRVDSAIYFSNSNYIKERWLVDEEELTKESYQNKIQFLIVEMSPVTDIDTSGIHALEELNGSLKKREIQLILANPGPVVIHKLHASEFADLIGQDHIFLTVADAVSSCSPKIMNDV 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3113853 3119074 + Cp4.1LG02g03570.1 Cpe02g00526 464475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00526 647 Pfam Sulfate permease family 91 467 IPR011547 GO:0016021
Cpe02g00526 647 Coils Coil 552 572 - -
Cpe02g00526 647 CDD STAS_SulP_like_sulfate_transporter 520 632 - -
Cpe02g00526 647 Pfam STAS domain 520 635 IPR002645 -
Cpe02g00526 647 ProSiteProfiles STAS domain profile. 519 639 IPR002645 -
Cpe02g00526 647 MobiDBLite consensus disorder prediction 1 27 - -
Cpe02g00526 647 PANTHER SULFATE TRANSPORTER 21 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe02g00526 647 PANTHER SULFATE TRANSPORTER 1.2-LIKE 21 644 - -
Cpe02g00526 647 TIGRFAM sulP: sulfate permease 78 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe02g00526 647 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Cpe02g00526 647 Gene3D STAS domain 499 642 IPR036513 -
Cpe02g00526 647 SUPERFAMILY SpoIIaa-like 521 640 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00526 Cpe-Chr2:3113853 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe12g01044 Cpe-Chr12:8684374 Cpe02g00526 Cpe-Chr2:3113853 4.18E-164 dispersed
Cpe18g00445 Cpe-Chr18:5470892 Cpe02g00526 Cpe-Chr2:3113853 4.19E-176 dispersed
Cpe01g02266 Cpe-Chr1:19198200 Cpe02g00526 Cpe-Chr2:3113853 1.20E-112 transposed
Cpe01g02010 Cpe-Chr1:17123361 Cpe02g00526 Cpe-Chr2:3113853 0 wgd
Cpe13g00577 Cpe-Chr13:5683783 Cpe02g00526 Cpe-Chr2:3113853 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00526 K17470 - csv:101207370 1093.57