Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00548 | ATGTACGTCATCACCATGCTCTGCCTTAAAAAGGGCATGAACCATTACGTTCTCGCCGTGTATCGACACCTTGTTGCCACCATCGTTATTTCCCCCTTTGCTTTCGTTCTCGAGAGGCCTGTGTTGGATCAAAATCTTTACTACGTGGGGTTAAAACTTACCTCAGCAACATTCACTTCTGCTACCGTCAATATTCTCCCCGCTGTAACTTTCATTATGGCTCTCGTTTTCAGGCTGGAAACTGTGAATTTTAAGAAAATTCGGAGCATCGCAAAGGTGGCCGGAACAATGGTGACGATCGGCGGAGCGATGGTGATGACTCTATACAAAGGACCGGTGGTCGAGATCTTCCACGCCCATGGCCACCACGCCGCCCAACAAACCAGCAGCGAGTCCGCCGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCGTTCACGTTGAAGAAGTATCCGGCCGAGCTGTCGCTGACCGCCTTGATATGCATCGCTGGCACGGTGGAGGGCTCCATTGTCACGCTCATTATGGAGCGTGATTTTAGCGTGTGGGTCATCGGCTGGGACTCCCGTCTTCTTGCCGCCGTTTATACGGGTGTGATATGCTCTGGACTTGCTTATTATATTCAAGGCGTGGTAATTCGGCAACGTGGCCCAGTTTTTGTTACCTCATTTACCCCTCTCTGCATGATTATTACTGCCTTCCTTGGCTTCGTTATTTTGGCAGAGCAAATTCACCTTGGAAGCATAATCGGAGCCTTTTTCATAGTGATGGGGCTTTACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTCAACAAATTAACCAGTCAAAAGGGCGCCGCCGCCACGGAGTTGCCACTCACCGCCGTGCCGGAAACCGCCGAGCCCGCCACTAACGAGCGTTTCCCTTCCAAAGCTCCACCGGCGTGA | 972 | 52.37 | MYVITMLCLKKGMNHYVLAVYRHLVATIVISPFAFVLERPVLDQNLYYVGLKLTSATFTSATVNILPAVTFIMALVFRLETVNFKKIRSIAKVAGTMVTIGGAMVMTLYKGPVVEIFHAHGHHAAQQTSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICIAGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRQRGPVFVTSFTPLCMIITAFLGFVILAEQIHLGSIIGAFFIVMGLYLVVWGKAKDHLNKLTSQKGAAATELPLTAVPETAEPATNERFPSKAPPA | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3275187 | 3277344 | - | Cp4.1LG02g03220.1 | Cpe02g00548 | 464497 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00548 | 323 | Pfam | EamA-like transporter family | 139 | 277 | IPR000620 | GO:0016020|GO:0016021 | |
Cpe02g00548 | 323 | PANTHER | WAT1-RELATED PROTEIN | 1 | 38 | IPR030184 | GO:0016021|GO:0022857 | |
Cpe02g00548 | 323 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 201 | 281 | - | - | |
Cpe02g00548 | 323 | PANTHER | WAT1-RELATED PROTEIN | 1 | 38 | - | - | |
Cpe02g00548 | 323 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 21 | 109 | - | - | |
Cpe02g00548 | 323 | PANTHER | WAT1-RELATED PROTEIN | 40 | 302 | IPR030184 | GO:0016021|GO:0022857 | |
Cpe02g00548 | 323 | MobiDBLite | consensus disorder prediction | 303 | 323 | - | - | |
Cpe02g00548 | 323 | PANTHER | WAT1-RELATED PROTEIN | 40 | 302 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00548 | Cpe06g00603 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00548 | Cpe-Chr2:3275187 | Cpe10g00870 | Cpe-Chr10:4902433 | 1.53E-108 | dispersed | |
Cpe09g00005 | Cpe-Chr9:23183 | Cpe02g00548 | Cpe-Chr2:3275187 | 9.17E-53 | dispersed | |
Cpe02g00548 | Cpe-Chr2:3275187 | Cpe06g00635 | Cpe-Chr6:3930842 | 0 | wgd | |
Cpe02g00548 | Cpe-Chr2:3275187 | Cpe06g00635 | Cpe-Chr6:3930842 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00548 | - | - | csv:101216002 | 548.125 |