Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00548 ATGTACGTCATCACCATGCTCTGCCTTAAAAAGGGCATGAACCATTACGTTCTCGCCGTGTATCGACACCTTGTTGCCACCATCGTTATTTCCCCCTTTGCTTTCGTTCTCGAGAGGCCTGTGTTGGATCAAAATCTTTACTACGTGGGGTTAAAACTTACCTCAGCAACATTCACTTCTGCTACCGTCAATATTCTCCCCGCTGTAACTTTCATTATGGCTCTCGTTTTCAGGCTGGAAACTGTGAATTTTAAGAAAATTCGGAGCATCGCAAAGGTGGCCGGAACAATGGTGACGATCGGCGGAGCGATGGTGATGACTCTATACAAAGGACCGGTGGTCGAGATCTTCCACGCCCATGGCCACCACGCCGCCCAACAAACCAGCAGCGAGTCCGCCGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCGTTCACGTTGAAGAAGTATCCGGCCGAGCTGTCGCTGACCGCCTTGATATGCATCGCTGGCACGGTGGAGGGCTCCATTGTCACGCTCATTATGGAGCGTGATTTTAGCGTGTGGGTCATCGGCTGGGACTCCCGTCTTCTTGCCGCCGTTTATACGGGTGTGATATGCTCTGGACTTGCTTATTATATTCAAGGCGTGGTAATTCGGCAACGTGGCCCAGTTTTTGTTACCTCATTTACCCCTCTCTGCATGATTATTACTGCCTTCCTTGGCTTCGTTATTTTGGCAGAGCAAATTCACCTTGGAAGCATAATCGGAGCCTTTTTCATAGTGATGGGGCTTTACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTCAACAAATTAACCAGTCAAAAGGGCGCCGCCGCCACGGAGTTGCCACTCACCGCCGTGCCGGAAACCGCCGAGCCCGCCACTAACGAGCGTTTCCCTTCCAAAGCTCCACCGGCGTGA 972 52.37 MYVITMLCLKKGMNHYVLAVYRHLVATIVISPFAFVLERPVLDQNLYYVGLKLTSATFTSATVNILPAVTFIMALVFRLETVNFKKIRSIAKVAGTMVTIGGAMVMTLYKGPVVEIFHAHGHHAAQQTSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICIAGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRQRGPVFVTSFTPLCMIITAFLGFVILAEQIHLGSIIGAFFIVMGLYLVVWGKAKDHLNKLTSQKGAAATELPLTAVPETAEPATNERFPSKAPPA 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3275187 3277344 - Cp4.1LG02g03220.1 Cpe02g00548 464497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00548 323 Pfam EamA-like transporter family 139 277 IPR000620 GO:0016020|GO:0016021
Cpe02g00548 323 PANTHER WAT1-RELATED PROTEIN 1 38 IPR030184 GO:0016021|GO:0022857
Cpe02g00548 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 281 - -
Cpe02g00548 323 PANTHER WAT1-RELATED PROTEIN 1 38 - -
Cpe02g00548 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 109 - -
Cpe02g00548 323 PANTHER WAT1-RELATED PROTEIN 40 302 IPR030184 GO:0016021|GO:0022857
Cpe02g00548 323 MobiDBLite consensus disorder prediction 303 323 - -
Cpe02g00548 323 PANTHER WAT1-RELATED PROTEIN 40 302 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00548 Cpe06g00603 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00548 Cpe-Chr2:3275187 Cpe10g00870 Cpe-Chr10:4902433 1.53E-108 dispersed
Cpe09g00005 Cpe-Chr9:23183 Cpe02g00548 Cpe-Chr2:3275187 9.17E-53 dispersed
Cpe02g00548 Cpe-Chr2:3275187 Cpe06g00635 Cpe-Chr6:3930842 0 wgd
Cpe02g00548 Cpe-Chr2:3275187 Cpe06g00635 Cpe-Chr6:3930842 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00548 - - csv:101216002 548.125