Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00556 ATGTCGGATACGGATACGGATACGGAGACGGAGACGAAGGCGGAGGCGGAGGCGGAGGTGTATGACGCGTCGATGCAGGTGAAGGAGTTGAGAGAAAGTTTTGCCTCCGGAAAGACTCGGTGCTATAAGTGGAGAGTTTCGCAGCTTGAGAGTCTCTTGAAGCTTAGCGTTGTCCACGAGGAAGATATCTGCGATGCGCTTCGCTCTGACCTATCCAAGCCTGTGATGGAAGCCATTATTCATGAGCGTTTTCTCGTTACCGCCAATGATTTTTGTTATCGGAGTCTCGTTAGATTTGTGAATCTTGCGTTTAATCCTGTTCATAAATGTTCCGTTCTGTTATCTGTGATAGCTTTGTTGAAAAATTCATGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGACGCCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTCTGGGTGTTGTCCTGATCATTTCTGCTTGGAATTATCCATTCTTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAGCAACATCATCTTTAATGGCAAAACTTTTAGGGAAATATTTGGATACTTCTGCTATAAAAGTTATTGAGGGTGCTACTTCCGAAACTTCTGCTTTGCTGGAGCAAAAATGGGACAAAATATTTTACACAGGCAGTGGAAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCACCTCACACCAGTTGTTTTGGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATACACAAATCAATTTACAAGTCGCGTGTAGGCGGATTATTGCTGGTAAGTGGGGTTGCAACAATGGGCAAGCATGCATTGCTCCTGATTATATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGACTCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAACCCTATGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGATGATGATAAGGTTTCTGGCAAGATTGTGCATGGAGGTGAAAGGGACAAAGCCAAATTACAGATTACTCCGACCCTCTTATTGGATGTCCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTCGGTCCCTTGCTTCCTATTCTCACGGTCGACAAAGTGGAGGATAGCTTCGAAGTAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACCAACAACAAGAGGCTCAAGGACCAGTTCGTAGCTTGCATCTCTGCAGGGGGTGTGGCCATCAATGACACCACCTTACATCTGACAGTTAGCACACTACCATTTGGAGGAGTTGGGGACAGTGGAATGGGATCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAAGCTTCGCAGGCGATGCACCGATGAGATACCCGCCGTACACGAAGGGAAAGCTAAGAATTCTCAAGGCTCTTCTTGGAGGTGACATATGGGGTCTCATTCGTGCTCTTTTTGGGTGGTCATAG 1590 44.78 MSDTDTDTETETKAEAEAEVYDASMQVKELRESFASGKTRCYKWRVSQLESLLKLSVVHEEDICDALRSDLSKPVMEAIIHERFLVTANDFCYRSLVRFVNLAFNPVHKCSVLLSVIALLKNSCKLALKELRRWMTPEKVKTSITTFPSSAAIVPEPLGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPATSSLMAKLLGKYLDTSAIKVIEGATSETSALLEQKWDKIFYTGSGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDTQINLQVACRRIIAGKWGCNNGQACIAPDYIITTKEFAPKLVETLKQELERFYGKNPMETKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGERDKAKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEVVNSGTKPLAAYLFTNNKRLKDQFVACISAGGVAINDTTLHLTVSTLPFGGVGDSGMGSYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGDIWGLIRALFGWS 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3321380 3328020 + Cp4.1LG02g03270.1 Cpe02g00556 464505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00556 529 PANTHER ALDEHYDE DEHYDROGENASE 21 83 - -
Cpe02g00556 529 Coils Coil 13 33 - -
Cpe02g00556 529 PIRSF ALDH 5 523 IPR012394 GO:0006081
Cpe02g00556 529 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 111 484 IPR016162 GO:0016491
Cpe02g00556 529 PANTHER ALDEHYDE DEHYDROGENASE 115 529 - -
Cpe02g00556 529 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 466 IPR016163 GO:0016620
Cpe02g00556 529 PANTHER ALDEHYDE DEHYDROGENASE 21 83 IPR012394 GO:0006081
Cpe02g00556 529 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Cpe02g00556 529 PANTHER ALDEHYDE DEHYDROGENASE 115 529 IPR012394 GO:0006081
Cpe02g00556 529 Pfam Aldehyde dehydrogenase family 126 486 IPR015590 GO:0016491
Cpe02g00556 529 SUPERFAMILY ALDH-like 17 489 IPR016161 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00556 Cpe06g00619 CCT
Cpe02g00556 Cpe06g00619 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00556 Cpe-Chr2:3321380 Cpe06g00619 Cpe-Chr6:3823714 0 dispersed
Cpe05g00500 Cpe-Chr5:2955599 Cpe02g00556 Cpe-Chr2:3321380 2.49E-154 transposed
Cpe14g00552 Cpe-Chr14:3505085 Cpe02g00556 Cpe-Chr2:3321380 6.13E-158 transposed
Cpe02g00556 Cpe-Chr2:3321380 Cpe06g00618 Cpe-Chr6:3815540 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00556 K00128 - csv:101219329 787.334