Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00572 ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTCGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGTAAAACTTCCCGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACGATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTATCCTCGAGAACCAACGACGTAACGCCGAGTAGCCAAGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTCGCCCACGTCCCCGAGAAGTACCGACTTACCGTGACCAAATTTATAAGGCGTGTCGTTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCTTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGTTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTACATAGGCAGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTCATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTGAGGAGGTATTGA 813 45.51 MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNPSVKLPVFQNGSHVIFDTIEIIQYIERIAVVSSRTNDVTPSSQEVVEWMHKIQQWNPKFFTLAHVPEKYRLTVTKFIRRVVISRMAETPEMAAAYHHKLREAYETEDKLKNKTVIKQSTDHLVRLLDEIESKLGETAFLAGEEFTMADAVFIPVLARLELLKVADEYIGSSSSRPNIAEYWMLVQQRPSYKKVIGKYFKGWRKHKTLMKTWCFLHIRTLLRRY 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3411111 3414635 - Cp4.1LG02g02970.1 Cpe02g00572 464521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00572 270 CDD GST_N_family 1 73 - -
Cpe02g00572 270 Pfam Glutathione S-transferase, C-terminal domain 161 227 - -
Cpe02g00572 270 SFLD Main (cytGST) 1 234 - -
Cpe02g00572 270 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cpe02g00572 270 SUPERFAMILY GST C-terminal domain-like 137 245 IPR036282 -
Cpe02g00572 270 CDD GST_C_family 140 228 - -
Cpe02g00572 270 Gene3D - 125 241 - -
Cpe02g00572 270 Gene3D Glutaredoxin 1 75 - -
Cpe02g00572 270 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 254 IPR010987 -
Cpe02g00572 270 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Cpe02g00572 270 SFLD Glutathione Transferase (cytosolic) 1 234 IPR040079 -
Cpe02g00572 270 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 270 IPR044617 GO:0004364
Cpe02g00572 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00572 Cpe06g00604 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00572 Cpe-Chr2:3411111 Cpe07g00339 Cpe-Chr7:2214690 1.23E-07 dispersed
Cpe02g00572 Cpe-Chr2:3411111 Cpe06g00604 Cpe-Chr6:3721406 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00572 K22077 - csv:101222476 492.656