Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00591 ATGGCCTTCTATACGGTAAAATGGCAATGGCTACTGATTCTTCACATTGTGCCGCTTTTCATGATAATGAGCAGAAGCAGTGGTACCAGTTCTGATGGTGAGGCACTTTTGAGCTTCAGAGCAGCAATTCTTGATTCTGATGGCGTTCTTCTTCAATGGAAGCCAGAAGAATCCCATCCTTGTAAATGGAGAGGAGTAACGTGTGATCCAAAAACTAAGAGAGTGATATATCTGAGTCTTCCTCATCACAAACTTAGCGGATCTTTATCCCCTGAACTTGGAAAACTTGACCACTTAAAAATTTTAGCACTTCATGACAATAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCACAGTTGCAGGGAGTGTTTCTGCAGGGTAATTACTTTAGTGGGTTCATTCCCAATGAATTGGGAAATCTTTCGGCACTTAAAAATTTAGATATTTCAAGTAACTCTCTCGGTGGAAATATTCCCATCTCGCTTGGGAACTTGAGCAAGCTTACTACCCTAAATGTGTCTGCCAATTTTCTGGTTGGATCAATACCGAATGTTGGAGTGCTAATCAACTTCTCGGAAAGCTCATTTCTTGGAAACCGTGGCTTGTGCGGGAAGCAAATAAATGTTATGTGCAAAGATGACAAAGAGACACCTGGAACAAATGATTCACCATTCTCAGTGCAAGATCAATTTGTAAGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCGGCAACTGTGGGTGCTCTACTGCTGGTTGCCCTAATGTGTTTCTGGGGTTGTTTTCTGTATAAAAAGTTCGGAAAAAATGACAGTAAAGGTCTAGTGCTGGACGTATGTGGAGGTGCTTCGGGTGTAATGTTTCACGGAGACTTGCCGTACTCATCTAAAGATATTATTAAGAAATTTGAGACACTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACCGTATACAAGCTTGCAATGGATGATGGCAATGTTTTTGCCTTGAAAAGAATCATGAAATTGAATGAAGGCTTTGATCGTTTCTTTGAGAGAGAGCTCGAAATACTTGGAAGCATGAAGCACAGGTTCCTTGTGAATTTGCGAGGATATTGCAATTCTCCTACATCAAAGCTGTTAATTTACGATTTCCTTCCTGGAGGCAGCCTTGATGAGGCACTACACGAGTACATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTATACAGTTTTGGGGTATTGGTACTTGAAGTATTGAGTGGCAAACGTCCCACCGATGCATCATTCATTGAAAAGGGGCTAAACATCGTTGGTTGGTTAAACTTTCTAGTCACAGAGAGCCGACAACGAGAAATCATCGACGTACAGTGCGAGGGAATGCGAACAGAAAGCCTCGACGCATTGGTTGCGGTTGCCATCCAATGCGTTTCGTCGAGTCCAGAAGAACGCCCCACCATGCACAGGGTGGTCCAGATATTGGAGTCTGAGGTTATGACTCCATGCCCAAGTGATTTCTATGATACAGATTAA 1536 42.38 MAFYTVKWQWLLILHIVPLFMIMSRSSGTSSDGEALLSFRAAILDSDGVLLQWKPEESHPCKWRGVTCDPKTKRVIYLSLPHHKLSGSLSPELGKLDHLKILALHDNNFYGTIPSELGNCSQLQGVFLQGNYFSGFIPNELGNLSALKNLDISSNSLGGNIPISLGNLSKLTTLNVSANFLVGSIPNVGVLINFSESSFLGNRGLCGKQINVMCKDDKETPGTNDSPFSVQDQFVRKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDSKGLVLDVCGGASGVMFHGDLPYSSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIMKLNEGFDRFFERELEILGSMKHRFLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTESRQREIIDVQCEGMRTESLDALVAVAIQCVSSSPEERPTMHRVVQILESEVMTPCPSDFYDTD 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3536733 3545929 - Cp4.1LG02g02730.1 Cpe02g00591 464540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00591 511 Pfam Protein kinase domain 312 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00591 511 ProSiteProfiles Protein kinase domain profile. 310 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00591 511 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Cpe02g00591 511 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00591 Cpe06g00589 CCT
Cpe01g00528 Cpe02g00591 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00591 Cpe-Chr2:3536733 Cpe18g00805 Cpe-Chr18:7509306 3.68E-101 dispersed
Cpe01g00528 Cpe-Chr1:3031762 Cpe02g00591 Cpe-Chr2:3536733 2.04E-58 transposed
Cpe02g00591 Cpe-Chr2:3536733 Cpe06g00536 Cpe-Chr6:3201477 4.05E-57 wgd
Cpe02g00591 Cpe-Chr2:3536733 Cpe06g00589 Cpe-Chr6:3606362 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62213 PF00069 Pkinase 5.70E-11 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00591 - - csv:101211605 743.421