Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00607 ATGCCGAAACTTATGGCGTCAAGTGTTGATGAAGATGGTAGGGAGCCAGCCATGGAGTCTGGAGAATCTGAGGAAGGAATTGTTGTCCGGGAAGTCTGTGCAAATGGGGTCTCCATAAAAACAACAGAAGTAGAAGCAAAACTCGATGAAGGAAATATTCAAGAGGCAGAATCTTCATTACGGGAAGGGTTATCCCTCAATTCTGAGGAAGCCAGAGCCCTTCTTGGAAAGTTGGAATATCAGAGAGGTAATCTAGAAGGTGCACTACGTGTGTTCGATGGTATTGATCTCCAAGCAGCTATTCAACGATTACAGCCTTGTATTGCTGAGAAGACACCTCCAAAAAAAGGACGTTCGCGCTCTGATTCTCAGCCTGCAGTTTCACAGCATGCTGCAAGCCTGATATTCCAACAAGGAATTCCTGACGGGCAAGTGGATGATAGATTGCAAGAGACTGTCAATCAGGCTGTTGAACTCCTCCCTGAGCTGTGGAAGCAGGCTGGCTGTTTCCAGGAAGCAATATCTGCCTATAGGCGTGCTCTCTTAAACCAATGGAACCTCAGTAATGACAGCTATGCTAGGATCCAGAAAGGATTTGCTGTGTTTTTGCTTTACAGTGGAGTAGACGCTGGTCCTCCTAGTCTAGCTGTTCAACTTGAAGGTTCATATGTACCGAAAAATAATTTGGAAGAAGCAATTCTACTTTTGATGCTTCTTGTGAAGGAATGTTTCCTTGGTAATACAAAATGGGATCCATCCGTGATGGAGCACCTAATATTTGCTCTATCCTCATGCAGACAGACTTCTGTTTTAGCAAAACAATTTGAAGAGGTCATGCCTGGGGTATATCGCCGTGTAGATCGTTGGAAGTATTTAGCTCTTTGTTATTGTGCAGCAGGACAGAACAAAGTTGCCTTGAATCTTCTGAGAAAGACTCTACACAAACACGAGCAACCAGGCGATGTAGCAGCCTTATTACTGGCTGCCAAGATCTGTAGTGAGGATCCTTATCTAGCTGCTGAAGGTGTTGAATACGCCCAGCGGGCAATGGATAATTGTATAGGAGATGAAGAGCATTTAAAGGGTGTGGGTCTTCGCATGTTAGGTCTTTGCTTGGGAAAACAAGCCAAAATTTCTTCCTCTGACTTCGAGAGGTCCCGTCTTCAGTCAGAGGCATTGAAATCTCTTGAGGCTGCAAATGGTCTGGAGAGAAATAACTTAGATTTGATGCTTGAGTTAGGAGTACAGTATTCCGAATATCGGAATTTGAATGCTGCATTGCAATATGCAAAGAAGTTCATTGATGGAACCGGTGGCTCTGTCTTAAAAGGCTGGCAGTTGCTCGCTCTTGTTTTGTCTGCCCAAAAGAGATTTCCAGAGGCGGAAGTGGTCACTGACGCTGCAATGGATGAGACCACAAAATGGGAACGAGGACCACTTCTCAGACTCAAGGCAAAGCTGAAAATCTCTCAATCATTACATATGGATGCTATTGAAACATACCGTTATCTCCTTGCATTAGTTCAAGCACAAAAGAAATCCTTTGGACCGCTCAGAATCGTCCCTCAGGTTGAAGATGACAAATTGAATGAATTTGAAGTTTGGAATGGTCTAATGCACCAAGGATGTGAGAAAATACAGGAAGCCCTAGCTGTATACATTAACGCTCTTCTACTTGAACCAACTTACGTTCCTTGCAAGGTTTTGATTGGTGCTATTTGGTCGAAAGCAGGCCCGGATGCATTGCCTATAGCAAGAGGCTTACTTTCCGACGCATTGAGATTAGATCCGACCAACGGTAAGGCTTGGTTGTACTTGGGGGTGATCCATAGGGACGAAGGACGAATGGCTGATGCAGTAGACTGCTTCCAGGCAGCCGCCATGCTTGAAGAATCAGATCCTGTTGAAAGCTTCAGCAGTATTCTATAG 1929 44.63 MPKLMASSVDEDGREPAMESGESEEGIVVREVCANGVSIKTTEVEAKLDEGNIQEAESSLREGLSLNSEEARALLGKLEYQRGNLEGALRVFDGIDLQAAIQRLQPCIAEKTPPKKGRSRSDSQPAVSQHAASLIFQQGIPDGQVDDRLQETVNQAVELLPELWKQAGCFQEAISAYRRALLNQWNLSNDSYARIQKGFAVFLLYSGVDAGPPSLAVQLEGSYVPKNNLEEAILLLMLLVKECFLGNTKWDPSVMEHLIFALSSCRQTSVLAKQFEEVMPGVYRRVDRWKYLALCYCAAGQNKVALNLLRKTLHKHEQPGDVAALLLAAKICSEDPYLAAEGVEYAQRAMDNCIGDEEHLKGVGLRMLGLCLGKQAKISSSDFERSRLQSEALKSLEAANGLERNNLDLMLELGVQYSEYRNLNAALQYAKKFIDGTGGSVLKGWQLLALVLSAQKRFPEAEVVTDAAMDETTKWERGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQKKSFGPLRIVPQVEDDKLNEFEVWNGLMHQGCEKIQEALAVYINALLLEPTYVPCKVLIGAIWSKAGPDALPIARGLLSDALRLDPTNGKAWLYLGVIHRDEGRMADAVDCFQAAAMLEESDPVESFSSIL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3665482 3671782 + Cp4.1LG02g02660.1 Cpe02g00607 464556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00607 642 Gene3D Tetratricopeptide repeat domain 41 514 IPR011990 GO:0005515
Cpe02g00607 642 PANTHER CALMODULIN-BINDING PROTEIN 18 136 - -
Cpe02g00607 642 PANTHER CALMODULIN-BINDING PROTEIN 135 539 - -
Cpe02g00607 642 MobiDBLite consensus disorder prediction 1 25 - -
Cpe02g00607 642 Pfam Tetratricopeptide repeat 602 633 IPR019734 GO:0005515
Cpe02g00607 642 SUPERFAMILY TPR-like 49 435 IPR011990 GO:0005515
Cpe02g00607 642 ProSiteProfiles TPR repeat profile. 600 633 IPR019734 GO:0005515
Cpe02g00607 642 Pfam Tetratricopeptide repeat 46 93 - -
Cpe02g00607 642 MobiDBLite consensus disorder prediction 8 25 - -
Cpe02g00607 642 Gene3D Tetratricopeptide repeat domain 530 638 IPR011990 GO:0005515
Cpe02g00607 642 PANTHER PROTEIN NPG1 537 641 IPR043376 -
Cpe02g00607 642 PANTHER PROTEIN NPG1 18 136 IPR043376 -
Cpe02g00607 642 PANTHER PROTEIN NPG1 135 539 IPR043376 -
Cpe02g00607 642 SUPERFAMILY TPR-like 413 624 IPR011990 GO:0005515
Cpe02g00607 642 SMART tpr_5 600 633 IPR019734 GO:0005515
Cpe02g00607 642 SMART tpr_5 286 319 IPR019734 GO:0005515
Cpe02g00607 642 SMART tpr_5 442 475 IPR019734 GO:0005515
Cpe02g00607 642 SMART tpr_5 532 563 IPR019734 GO:0005515
Cpe02g00607 642 PANTHER CALMODULIN-BINDING PROTEIN 537 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00607 Cpe-Chr2:3665482 Cpe15g00093 Cpe-Chr15:703413 1.54E-166 dispersed
Cpe02g00607 Cpe-Chr2:3665482 Cpe06g00565 Cpe-Chr6:3416728 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00607 K21843 - csv:101206641 1098.19