Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00634 ATGGCAATGGCGACCTTCAAGCTTCATCCTCTTCTTCTCGTTTTTCTTGTTCTGTTTCTTCTGCTTATTCCTTCACTGATTGCGGCACAGGAAGAGTGTAACTGTCCTGAAGAAGAAGAAGACGAAGGAATCCGAAACAAACCGCTAGCCCTAAAATACAAAATCGTTGCCATAGCTACGATTCTCGCCGCTGGATTAATCGGAGTTTCTATTCCGATGCTCGGTAAGGTGATTCCTGCTTTGAGTCCTGAGAAGGAGATTTTCTTTGTTATTAAAGCCTTTGCCGCTGGTGTCATTTTGGCTACCGGATTCATCCATGTTCTTCCTGATGCTTACGAGAGTTTGCAATCGCCGAAACTGAAAGAGGATCCCTGGGCGAAGTTTCCGTTCACTGGCTTGGTGGCTATGGTGGCGGCTATTGGTACTTTAATGGTGGATGCCGGTGCTAGCTCTTATTATACTCGTCTTCATCTGAAGAGAGCTCAGCCTGAGATTGATGAGATGAACGGCAGAGCTATCGAAGCTCATATTCCTGTTCATACTCACGGCGGTCATGGCCACGCTCATGACTCCTCTGATGTCACTGGAACACCGGCGGAGATTCTCCGGCACCGTGTGATCTCTCAGGTACTGGAGCTGGGGATAGTGGTACATTCGGTAATTATTGGGATTGGTTTGGGCGTTTCTGAAACTCCCAAAACCATTAGGCCTCTAGTGGCGGCCATTACTTTTCATCAGTTATTCGAGGGCATGGGCTTAGGAGGATCCATCGCTCAGGCAAAGTTCAAGAACAGAGCAACAATAATAATGGCGCTTTTCTTCTGTCTGACAACGCCAATTGGGATAGTAATAGGCATTGGAGTAACAAACGGTTACGACGAAGAGGACCCAAAGGCACTGATAGTGGAAGGGATATTGAACGCAGCTTCAGCAGGTATCTTAATCTATATGGCTCTTGTTGATCTGTTGGCTGCCGATTTTATGAACCCAAGAATGCAGAGTAATGGAAAACTTCAATTTATGGCCAATCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCTTTACTCGCTATCTGGGCTTGA 1083 46.35 MAMATFKLHPLLLVFLVLFLLLIPSLIAAQEECNCPEEEEDEGIRNKPLALKYKIVAIATILAAGLIGVSIPMLGKVIPALSPEKEIFFVIKAFAAGVILATGFIHVLPDAYESLQSPKLKEDPWAKFPFTGLVAMVAAIGTLMVDAGASSYYTRLHLKRAQPEIDEMNGRAIEAHIPVHTHGGHGHAHDSSDVTGTPAEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGSIAQAKFKNRATIIMALFFCLTTPIGIVIGIGVTNGYDEEDPKALIVEGILNAASAGILIYMALVDLLAADFMNPRMQSNGKLQFMANLSLILGAALMSLLAIWA 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3859647 3863613 + Cp4.1LG02g02380.1 Cpe02g00634 464583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00634 360 TIGRFAM zip: ZIP zinc/iron transport family 38 360 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cpe02g00634 360 Pfam ZIP Zinc transporter 52 357 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe02g00634 360 PANTHER ZINC/IRON TRANSPORTER 22 360 - -
Cpe02g00634 360 PANTHER ZINC TRANSPORTER 1 22 360 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00634 Cpe14g00389 CCT
Cpe01g00579 Cpe02g00634 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00634 Cpe-Chr2:3859647 Cpe06g00552 Cpe-Chr6:3318109 1.29E-179 dispersed
Cpe15g00906 Cpe-Chr15:8697039 Cpe02g00634 Cpe-Chr2:3859647 5.48E-108 wgd
Cpe02g00634 Cpe-Chr2:3859647 Cpe06g00550 Cpe-Chr6:3309078 1.19E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00634 K14709 - csv:101215851 508.064