Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00653 ATGCCTGGGAATAAGTATAAAGTTAACTCAAACGATATTACGGACCATATACCAGGTCGACTAGAAAGGCTCTTGCGAGAGAGAAAGCTAAGGAAAAGCAGTAAGGATTCATATTCAAATGAGGTGAACGACCACAGTAAGGAGTCTGAACTAATTGAAAATGACCTTCGTTCGAAAGAAGAAGAAAACGCTGGAATTTCCTATAAATTTTCGGAAGCTTCTGCAGCCTCAAGGGCCTTTGCCGAAGGATGTGACAAGCAAGAGGGCAAGCCTCCCAGACAACGGTTGCTGGTTGTGGCCAATAGGCTGCCAGTTTCTGCGGTTAGGAGAGGTGAAGATTCCTGGTCTCTAGAGATTAGTGCTGGAGGTCTAGTGAGTGCACTTCTGGGCGTGAATGACTTTGAAGCGAGATGGATTGGTTGGGCTGGTGTAAATGTGCCAGATGAGGTAGGACAAAAGGCACTGACTGAAGCTTTGGCTGAGAAGTACTACAATGGTTATTGCAACAACATTTTATGGCCTTTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACGCGTAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAAGCAAACCAAATGTTTGCTGACGTAGTAAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCCAAATGTCTAAAAGATCATAATCGTAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCTTCTGAAATCCACAGGACCCTTCCGTCCCGATCAGAGCTTCTGCGCTCAGTACTTGCTGCCGATCTGGTTGGCTTTCACACGTATGATTATGCTCGTCATTTCGTAAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGATCAAGGAAAGCTAACGCGAGTTGCTGCATTCCCTATTGGTATCGACTCAGATCGATTCATACGTGCACTCAAGACTTCTGAAGTCCAAGTACGCATTGAAGAGTTGAAGGACAGATTTAAAGGTCGAAAGGTAATGTTAGGCGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACACTGATTGGCGTGATAAAGTTGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGACGTGCCAGAATATCAAAAGCTTACAAGCCAAGTTCATGAAATAGTTGGACGCATTAATGGGAGATTTGGAACATTGACTACCGTGCCCATACATCATCTGGATCGCTCCCTTGATTTTCCTGCATTATGTGCCCTCTATGCTGTAACTGATGTAGCGCTTGTCACATCTTTGAGGGATGGAATGAATCTCGTCAGTTATGAATTCGTCGCTTGCCAGGATGCAAAGAAAGGGGTTTTAATTCTTAGTGAGTTTGCTGGTGCTGCGCAATCTCTGGGTGCTGGGGCACTTTTGGTCAACCCTTGGAACATAACAGAAGTCGCAAAATCCATCGAGCGAGCATTAAAGATGGGTGCTGAAGAAAGAGAAAAGCGCCATTGGCATAATTTTCTTCATGTGACAACACACACTGCCCAGGAATGGGCTGAAACTTTTGTGAGTGAACTTAACGATACAGTAGTTGAAGCTGAACTGAGGATTAGGCAATGTCCACCCCCGCTTCCATTTGACAATGCAATGAAACGTTATGAGCAATCTACTAATCGATTACTCATACTGTCTACTAATCGATTACTTATATTGGTAAGCCGTGTTTGGTTGGGGATGGACACTCCTGAAAGAAGAGGCGATCAGATTAGAGAAATGGATCTGAAACTACACCCGGATTTGAAAGAACCATTGACGGCGATTTGCAACGACCCCAATACGACAGTGGTCATCCTCAGTGGGAGCGATAGAACAGTGTTGGATGATGTACTTCTAGCTTCACGCTTTTTTCTGTTAATGCTTTATCCTATCTACCTACTTTTTAACCCAGTGCTTTGGCAGAACTTTGGGGAGTATGATATGTGGTTGGCAGCTGAGAATGGGATGTTTCTACGCTTCACAAGGGGTGACTGGATGACTACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCACGTTTTTGAGTACTTCACAGAGAGAACTCCCCGTTCCCATTTTGAACTCCGCGAAACTTCACTTGTTTGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGGGATATGCTGCAGCATTTATGGACAGGTCCAATTTCTAACGCATCAGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAAGTGCGAGCTGTTGGCGTTACCAAGGATGAAGATGTTTACACATTCTTTGAGCCTGAACTACCATCGGATACCATAGGCATGGCAAGATCAAAGGGAACTGACGGACTTAAGTTAACGGGGGAGAGAAGATCTTCCATCAAAGTTCCTGCAAGTAGGAACGGATCGACAGCGCCTCACAATAAGGCGCGGTCGAACCTGGAGAAGAAAACTTCAAATCATAATTGTGCAAACGGTCGTAAACCATCACCGGAGAAGATTCAATGGAATGTGCTCGATCTCCAGGCTGAGAACTACTTCTCTTGTGCTGTCGGACGATCTCGGACAAATGCTCGATATATGCTCGGATCATCAGATGATGTGGTGTCATTCCTAAAGGAGTTGGCAAGTGCAAAGTCATTTTCTTGA 2739 44.29 MPGNKYKVNSNDITDHIPGRLERLLRERKLRKSSKDSYSNEVNDHSKESELIENDLRSKEEENAGISYKFSEASAASRAFAEGCDKQEGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVNDFEARWIGWAGVNVPDEVGQKALTEALAEKYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKDHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKTSEVQVRIEELKDRFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENTDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIERALKMGAEEREKRHWHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQCPPPLPFDNAMKRYEQSTNRLLILSTNRLLILVSRVWLGMDTPERRGDQIREMDLKLHPDLKEPLTAICNDPNTTVVILSGSDRTVLDDVLLASRFFLLMLYPIYLLFNPVLWQNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKDEDVYTFFEPELPSDTIGMARSKGTDGLKLTGERRSSIKVPASRNGSTAPHNKARSNLEKKTSNHNCANGRKPSPEKIQWNVLDLQAENYFSCAVGRSRTNARYMLGSSDDVVSFLKELASAKSFS 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4020471 4036865 - Cp4.1LG02g02250.1 Cpe02g00653 464602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 648 IPR001830 GO:0003824|GO:0005992
Cpe02g00653 912 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 549 - -
Cpe02g00653 912 Gene3D Glycogen Phosphorylase B; 329 529 - -
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 786 906 - -
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 669 787 IPR001830 GO:0003824|GO:0005992
Cpe02g00653 912 MobiDBLite consensus disorder prediction 31 52 - -
Cpe02g00653 912 Gene3D - 702 782 - -
Cpe02g00653 912 SUPERFAMILY HAD-like 678 790 IPR036412 -
Cpe02g00653 912 Gene3D Glycogen Phosphorylase B; 87 328 - -
Cpe02g00653 912 MobiDBLite consensus disorder prediction 820 861 - -
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 669 787 - -
Cpe02g00653 912 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 95 546 IPR012766 GO:0003825|GO:0005992
Cpe02g00653 912 MobiDBLite consensus disorder prediction 824 839 - -
Cpe02g00653 912 Pfam Trehalose-phosphatase 671 788 IPR003337 GO:0003824|GO:0005992
Cpe02g00653 912 Gene3D - 681 792 IPR023214 -
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 786 906 IPR001830 GO:0003824|GO:0005992
Cpe02g00653 912 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 648 - -
Cpe02g00653 912 Coils Coil 42 62 - -
Cpe02g00653 912 CDD GT20_TPS 95 546 IPR001830 GO:0003824|GO:0005992
Cpe02g00653 912 Pfam Glycosyltransferase family 20 95 546 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00653 Cpe-Chr2:4020471 Cpe08g00861 Cpe-Chr8:6802020 3.88E-122 dispersed
Cpe02g00653 Cpe-Chr2:4020471 Cpe09g00783 Cpe-Chr9:7260120 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00653 K16055 - csv:101204478 1577.38