Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00742 ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTCGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGATTTTTTCGTCGTATTTTGAATTGGATTCATTTCTGGAGACTACGGTGAGTGATAATCAAGATCAAAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTTGTCGAATTTGAATCCGGGGTCGAATGCGTTTGTTTACGATGGATGCTCGAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGCCAGAGGTCCTACTCATGGAGCCAAGATCGACAGGGTGAGTCGAGTCTTGTACAGTTGCAGACGTTGCCAGTGTCGATAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCGCCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTCCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCGGGGGCGAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCTTACTTGAAGTTCGGTTACATGGCAGCTAACGGGGCGATTGCTGAAGCCTGCAGAAACGAAGATCGCATCCACATTATAGACTTCCAGATTACTCAGGGTACACAGTGGTTAACTCTTCTTCAGGCACTCGCAGCAAGGCCCGGTGGTGCTCCCCATGTGAGAATAACTGGTATCGACGACCCCGTTTCTAAGTATGCCCGTGGTGAGGGGTTGGAGGTCGTTGAGAGGCGGTTGGCTGAAGTCTCAAGGAAGTATGGAATACCAGTAGAGTTTCATGGATTACCCGTTTTCGCTCCAGACGTCACGCGTGGTATGCTTGATATCAGACCGGGGGAGGCTCTGGCTGTAAACTTCCCCTTGCAGCTTCATCATACCCCCGACGAAAGCGTCGACGTAAACAATCCACGGGACGGTTTGCTGAGAATGGTGAAGTCATTGTCCCCAAGGGTAGTAACTTTGGTAGAGCAAGAATCCAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTTTAGATTACTACTTAGCAATCTTCGAGTCCATTGATGTCACTCTACCAAGGAACAGCAAGAAGGGTATCAACATCGAGCAGCATTGTTTGGCGAAAGATATCGTTAACGTCATCGCTTGCGAGGGGAGGGAACGAGAAGAATGCCACGAGCTCTTCGGCAAGTGGAAAACAAGATTGACAATGGCAGGGTTCTGCCAGTTCCCTTTGAGCTCTTACGTCAACTCCGTCATCAGGAGCCTGCTCAGGTGCTATTCGGAGCATTACACTCTCGTCGAAAAAGATGGAGCAATGCTGCTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCCTGGTATTGA 1746 46.85 MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLRPLKFSVRNSPASSSIFSSYFELDSFLETTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIALSNLNPGSNAFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGESSLVQLQTLPVSISQRSQAVHLGKRQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKYARGEGLEVVERRLAEVSRKYGIPVEFHGLPVFAPDVTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNSKKGINIEQHCLAKDIVNVIACEGREREECHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWY 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4722576 4724321 - Cp4.1LG02g01340.1 Cpe02g00742 464691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00742 581 Pfam GRAS domain family 211 580 IPR005202 -
Cpe02g00742 581 ProSiteProfiles GRAS family profile. 202 581 IPR005202 -
Cpe02g00742 581 MobiDBLite consensus disorder prediction 135 159 - -
Cpe02g00742 581 MobiDBLite consensus disorder prediction 144 159 - -
Cpe02g00742 581 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 19 580 - -
Cpe02g00742 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 580 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00742 Cpe-Chr2:4722576 Cpe05g01400 Cpe-Chr5:9850883 5.42E-173 dispersed
Cpe02g00742 Cpe-Chr2:4722576 Cpe16g00391 Cpe-Chr16:5492187 1.03E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49030 PF03514 GRAS 8.90E-125 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00742 - - csv:101216606 972.23