Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00773 ATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGNTAACTTACAACATAATAATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGGATCAGATCAAAATCCATGGATTTTAA 741 46.29 IVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKXTYNIIIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4921219 4923871 - Cp4.1LG02g01050.1 Cpe02g00773 464722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00773 246 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 13 120 - -
Cpe02g00773 246 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 135 246 - -
Cpe02g00773 246 PANTHER BNAA10G09260D PROTEIN 135 246 - -
Cpe02g00773 246 SUPERFAMILY eIF1-like 14 117 IPR036877 GO:0003743|GO:0006413
Cpe02g00773 246 SUPERFAMILY eIF1-like 136 246 IPR036877 GO:0003743|GO:0006413
Cpe02g00773 246 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 139 246 IPR005874 GO:0003743
Cpe02g00773 246 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 17 119 IPR005874 GO:0003743
Cpe02g00773 246 CDD eIF1_SUI1 40 116 IPR005874 GO:0003743
Cpe02g00773 246 Gene3D - 8 125 - -
Cpe02g00773 246 Gene3D - 130 246 - -
Cpe02g00773 246 PANTHER BNAA10G09260D PROTEIN 13 120 - -
Cpe02g00773 246 Pfam Translation initiation factor SUI1 161 235 IPR001950 GO:0003743|GO:0006413
Cpe02g00773 246 Pfam Translation initiation factor SUI1 39 113 IPR001950 GO:0003743|GO:0006413
Cpe02g00773 246 ProSiteProfiles Translation initiation factor SUI1 family profile. 164 234 IPR001950 GO:0003743|GO:0006413
Cpe02g00773 246 CDD eIF1_SUI1 162 245 IPR005874 GO:0003743
Cpe02g00773 246 ProSiteProfiles Translation initiation factor SUI1 family profile. 42 112 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00773 Cpe06g00771 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00773 Cpe-Chr2:4921219 Cpe15g00751 Cpe-Chr15:7791911 1.18E-87 dispersed
Cpe02g00773 Cpe-Chr2:4921219 Cpe06g00771 Cpe-Chr6:4865024 3.05E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00773 K03113 - csv:101202908 219.55