Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00782 ATGGACTGGACCAGAGGCCCCGCCGTCGGCCGCGGTTCGTCCGCCACCGTCTATTTGGCCACCACCACCACCTCTTCTTCCTCCTCGCGCCAATTCGCTGTCAAAACCACTGACCTCTCTACATCGGCGTTGTTGCGGAAGGAACACGCTCTTCTCTCTAATTTGAACTCCCCATACCTAATCAACTGCTTTGGTTTCGACGTTGAGATTGAGAGCTCTAAGTCGCCGGTTTTCAATCTGTTTATGGAGTATTTACCGGAGGGGACGCTGTGGGATGCTATTCAGAGACATGGTGGACGGATGGAGGAATCGATGATCGGGGCGTATTCGCGCCAGATTCTCAAAGGATTGGAGTATCTTCACGCGAATGGATTGGCGCATTGTGATATCAAGAGCCGGAATCTGTTGTTGAGTGGTGAGGGCTTGAAAATCGCGGATCTAGGTTGTGCGAAATTTGTGGAAGGAGGAGGAGTTTCTGGAAATGGAGTTAGGGCTTTTTCTGGTTCGCCTGCGTACATGGCGCCGGAGGTTGCGAGAGGTGAAGAACAGGGATTTCCAGCGGATGTTTGGGCGTTTGGATGTACGGTCATTGAAATGGCTACTGGTAATCATCCATGGACAGGATTGGAGGATCCGGTAACAGCGTTGTATACGATTGGTTTTTCCGGCGAGGTTCCGGAGGTTCCGCGGTGGTTGTCGGAGGAAGCGAGGGATTTCGTCGCTAAGTGTTTGATAAAAGACCCGAAAGAACGATGGAGTGTGAAACGGCTTCTTGAGCATCCGTTTCTTCAGGGATTTGATTCTGAATCCGAAATTGAATGTTCGAGGAGGAAAACGACGAGTTCTTCTCCAAGCTCTGTTTTGGATCAGAGCTTTTGGGATTCAATGGAAGATTCGGAGACTCCATTGAAGGTGAGCCATCAAGCTTCTCTGGCGGATTCTCCGGCAGAGAGGATTAGAAGCTTGGCTGGAAATTTGTCTTCCAATTGCGATTGGGAAGGGGATGATGAACGAGATTGGTTCTTGATCAGAAACAACGACGTTGGCGGAAGAAGCCATGGAAATGGATCTGTGAGCTCAGATTTTCCTCAAGAAGAAGAAGAAGAAGAGATGGATCAAACGAGTATTGTTCTTATTCATTAA 1143 49.26 MDWTRGPAVGRGSSATVYLATTTTSSSSSRQFAVKTTDLSTSALLRKEHALLSNLNSPYLINCFGFDVEIESSKSPVFNLFMEYLPEGTLWDAIQRHGGRMEESMIGAYSRQILKGLEYLHANGLAHCDIKSRNLLLSGEGLKIADLGCAKFVEGGGVSGNGVRAFSGSPAYMAPEVARGEEQGFPADVWAFGCTVIEMATGNHPWTGLEDPVTALYTIGFSGEVPEVPRWLSEEARDFVAKCLIKDPKERWSVKRLLEHPFLQGFDSESEIECSRRKTTSSSPSSVLDQSFWDSMEDSETPLKVSHQASLADSPAERIRSLAGNLSSNCDWEGDDERDWFLIRNNDVGGRSHGNGSVSSDFPQEEEEEEMDQTSIVLIH 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4988119 4989382 - Cp4.1LG02g00880.1 Cpe02g00782 464731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00782 380 MobiDBLite consensus disorder prediction 346 380 - -
Cpe02g00782 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Cpe02g00782 380 CDD STKc_MAPKKK 2 263 - -
Cpe02g00782 380 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00782 380 SUPERFAMILY Protein kinase-like (PK-like) 3 311 IPR011009 -
Cpe02g00782 380 Pfam Protein kinase domain 7 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00782 380 ProSitePatterns Protein kinases ATP-binding region signature. 9 35 IPR017441 GO:0005524
Cpe02g00782 380 Gene3D Transferase(Phosphotransferase) domain 1 2 326 - -
Cpe02g00782 380 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00782 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 350 - -
Cpe02g00782 380 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00782 Cpe-Chr2:4988119 Cpe06g00777 Cpe-Chr6:4906718 0 dispersed
Cpe10g00777 Cpe-Chr10:4420219 Cpe02g00782 Cpe-Chr2:4988119 6.60E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62220 PF00069 Pkinase 1.10E-51 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00782 K20716 - bhj:120084748 587.8