Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00792 ATGGCGTATACTTTGGAGTCATGGACGAAGGAATACAATGAAGCTTTGAAACTCTCTGAAGAGATCAATGGCATGATTTCTGAGAGAAATTCACTTGCTGCGTCTGGCCCGGAAGCTCAACGTCACGCTTCGGCCATACGCAGGAAGATCACGATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAACCGTCGCAGGGACATGATAGCAAATTTGAGATCAAAAGCTAACCAGATGGCTTCAGCTTTGAACATGTCGAACTTTGCGAACCGTGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTTATGAACAGAACAGCAGGCTTGGACAACCAGGGCCTAGTTGGTTTTCAACGACAAATCATGAGAGAGCAAGATGAAGGTCTCGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTACCCTTCACACGAGACTTATTGATGATTTAGATGAACACGTTGATGTTACAGATTCACGATTACGGCGAGTGCAGAAGAGGCTGGCAATATTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCGATGATTTTATCGGTTGTCGGGATCGTCGTTCTTGCTGCTGTTATATGGCTACTCATCAAGTATTTGTAA 702 44.3 MAYTLESWTKEYNEALKLSEEINGMISERNSLAASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASALNMSNFANRDSLLGPEIKPADVMNRTAGLDNQGLVGFQRQIMREQDEGLEKLEGTIISTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLAAVIWLLIKYL 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5071070 5074399 + Cp4.1LG02g00800.1 Cpe02g00792 464741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00792 233 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 6 228 - -
Cpe02g00792 233 SMART tSNARE_6 132 199 IPR000727 -
Cpe02g00792 233 CDD SNARE_Qc 140 197 - -
Cpe02g00792 233 Pfam SNARE domain 174 224 IPR000727 -
Cpe02g00792 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Cpe02g00792 233 Gene3D - 139 201 - -
Cpe02g00792 233 PANTHER SYNTAXIN 6 228 IPR045242 -
Cpe02g00792 233 SUPERFAMILY SNARE fusion complex 128 199 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00792 Cpe14g00748 CCT
Cpe02g00792 Cpe06g00787 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00037 Cpe-Chr12:191426 Cpe02g00792 Cpe-Chr2:5071070 8.47E-09 transposed
Cpe14g00748 Cpe-Chr14:5704118 Cpe02g00792 Cpe-Chr2:5071070 1.25E-62 wgd
Cpe02g00792 Cpe-Chr2:5071070 Cpe06g00787 Cpe-Chr6:5008423 1.95E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00792 K08503 - csv:101208669 429.098