Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00800 ATGGGAGTGCTCGAAACTGTCAAGAACATCGGCAGCGACCACGCCCCGGTCGTCCCCTTGACGTTGTTCGTTGCTGTTCTTTGTTTATGCTTGGTTATTGGCCATTTGCTCGAAGAAAATCGTTGGGTTAATGAATCCATCACTGCCATTATCATTGGAGGTGTTACTGGCACGATCATATTGGTCTGTAGCAAGGGAAAAGATTCTCATATCCTAACTTTTAATGAGGAAGTGTTCTTCATATATCTCCTTCCCCCAATAATTTTCAATGCTGGATTTCAAGTTAAAAAGAAGCAGTTCTTCCACAACTTCTTGACCATTATGCTGTTCGGGGTGATTGGTGTTTTTATATCTGCACTCATTATAACGTCTGGTAGCCAGTGGCTGTTTCCAAGGATGGGCTTCCATGGTCTGTCCGCACGGGACTATATTGCTATAGGTGCTATTTTTTCATCCACGGACACAGTATGCACTCTGCAGGTACTACACCAAGAGGAAACGCCTTTACTCTACAGTCTAGTCTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGATTGACATCACTAGGCTTAACAGCAAGACAGCCCTTCATGTGTTCGGAGATTTTTGTTACTTATTTTCAACTAGCACCGTCCTTGGAGTGACTGCTGGGCTTCTAACAGCATATATCCTGAAAACCTTATACTTCGGGAGGCATTCAAGTGTGCGTGAGCTTGCGATAATGGTCTTAATGGCTTACCTGTCATACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATACTCACAGTTTTCTTTTGTGGGGTTATCATGTCGCACTATGCATGGCATAATTTCAAAGATAACCACCAGGCAAGTACAAGCACAACTTCTAGATGCATGCTGAAGGTAACAATATCTGTGTTCCAATGGTTTTTGCATGTATTTTCAATGATGTCGTTCGTTGCTGAAACTGCAATATTTCTTTACGTGGGCATGGATGCTCTTGACATAGAGAAGTGGAAGATAACTAAATTAAGCTTGTGGAAGTTGGTTGGTACGTATACCATAACAGTCTTCTTGATATTGCTTGGTCGTGCGGCCTTTGTGTTTCCCCTATCTGCCATATCGAATTACTTCAATAAGCGCGAAGATAGATCGTCATCATCTTCTATAATTACATTTAAACAACAGTTCACCTATTCTGGGGTTACACGGGATCCAACCCACGCAACAATGATTACCATCACCACGGTTGTGGTACTCTTCACTACGGTGGTATTTGGGTTTCTAACAAAGCCGCTCATAAGATGTCTGCTTCCACTCAACCAAGCAACTAACAGTGCAAGCAACTCCGGTCCGAAGTTCACCGAAGAGGACATAACTCTCCCTTTGCTTTCCATGGAAGAGTCTGCTGCAACCAATGTCCTCCGTGCAAAGGATAGTTTGTCAATGTTAATGGAGAGACCTGTGTACACCATACATTTCTTTTGGAGGAAATTCGATGATTACTACATGAGACCTATATTTGGAGGGCCTTGCCACAGCAACCAACCTAGTGGT 1569 43.28 MGVLETVKNIGSDHAPVVPLTLFVAVLCLCLVIGHLLEENRWVNESITAIIIGGVTGTIILVCSKGKDSHILTFNEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISALIITSGSQWLFPRMGFHGLSARDYIAIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDITRLNSKTALHVFGDFCYLFSTSTVLGVTAGLLTAYILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGVIMSHYAWHNFKDNHQASTSTTSRCMLKVTISVFQWFLHVFSMMSFVAETAIFLYVGMDALDIEKWKITKLSLWKLVGTYTITVFLILLGRAAFVFPLSAISNYFNKREDRSSSSSIITFKQQFTYSGVTRDPTHATMITITTVVVLFTTVVFGFLTKPLIRCLLPLNQATNSASNSGPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLMERPVYTIHFFWRKFDDYYMRPIFGGPCHSNQPSG 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5117043 5124508 - Cp4.1LG02g00760.1 Cpe02g00800 464749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00800 523 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe02g00800 523 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe02g00800 523 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe02g00800 523 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe02g00800 523 Gene3D - 139 191 - -
Cpe02g00800 523 PANTHER SODIUM/HYDROGEN EXCHANGER 9 519 - -
Cpe02g00800 523 Pfam Sodium/hydrogen exchanger family 23 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe02g00800 523 PANTHER SODIUM/HYDROGEN EXCHANGER 9 519 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00800 Cpe-Chr2:5117043 Cpe04g00237 Cpe-Chr4:2910144 0 dispersed
Cpe02g00800 Cpe-Chr2:5117043 Cpe12g00971 Cpe-Chr12:8191682 5.85E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00800 - - csv:101217775 848.195