Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00800 | ATGGGAGTGCTCGAAACTGTCAAGAACATCGGCAGCGACCACGCCCCGGTCGTCCCCTTGACGTTGTTCGTTGCTGTTCTTTGTTTATGCTTGGTTATTGGCCATTTGCTCGAAGAAAATCGTTGGGTTAATGAATCCATCACTGCCATTATCATTGGAGGTGTTACTGGCACGATCATATTGGTCTGTAGCAAGGGAAAAGATTCTCATATCCTAACTTTTAATGAGGAAGTGTTCTTCATATATCTCCTTCCCCCAATAATTTTCAATGCTGGATTTCAAGTTAAAAAGAAGCAGTTCTTCCACAACTTCTTGACCATTATGCTGTTCGGGGTGATTGGTGTTTTTATATCTGCACTCATTATAACGTCTGGTAGCCAGTGGCTGTTTCCAAGGATGGGCTTCCATGGTCTGTCCGCACGGGACTATATTGCTATAGGTGCTATTTTTTCATCCACGGACACAGTATGCACTCTGCAGGTACTACACCAAGAGGAAACGCCTTTACTCTACAGTCTAGTCTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGATTGACATCACTAGGCTTAACAGCAAGACAGCCCTTCATGTGTTCGGAGATTTTTGTTACTTATTTTCAACTAGCACCGTCCTTGGAGTGACTGCTGGGCTTCTAACAGCATATATCCTGAAAACCTTATACTTCGGGAGGCATTCAAGTGTGCGTGAGCTTGCGATAATGGTCTTAATGGCTTACCTGTCATACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATACTCACAGTTTTCTTTTGTGGGGTTATCATGTCGCACTATGCATGGCATAATTTCAAAGATAACCACCAGGCAAGTACAAGCACAACTTCTAGATGCATGCTGAAGGTAACAATATCTGTGTTCCAATGGTTTTTGCATGTATTTTCAATGATGTCGTTCGTTGCTGAAACTGCAATATTTCTTTACGTGGGCATGGATGCTCTTGACATAGAGAAGTGGAAGATAACTAAATTAAGCTTGTGGAAGTTGGTTGGTACGTATACCATAACAGTCTTCTTGATATTGCTTGGTCGTGCGGCCTTTGTGTTTCCCCTATCTGCCATATCGAATTACTTCAATAAGCGCGAAGATAGATCGTCATCATCTTCTATAATTACATTTAAACAACAGTTCACCTATTCTGGGGTTACACGGGATCCAACCCACGCAACAATGATTACCATCACCACGGTTGTGGTACTCTTCACTACGGTGGTATTTGGGTTTCTAACAAAGCCGCTCATAAGATGTCTGCTTCCACTCAACCAAGCAACTAACAGTGCAAGCAACTCCGGTCCGAAGTTCACCGAAGAGGACATAACTCTCCCTTTGCTTTCCATGGAAGAGTCTGCTGCAACCAATGTCCTCCGTGCAAAGGATAGTTTGTCAATGTTAATGGAGAGACCTGTGTACACCATACATTTCTTTTGGAGGAAATTCGATGATTACTACATGAGACCTATATTTGGAGGGCCTTGCCACAGCAACCAACCTAGTGGT | 1569 | 43.28 | MGVLETVKNIGSDHAPVVPLTLFVAVLCLCLVIGHLLEENRWVNESITAIIIGGVTGTIILVCSKGKDSHILTFNEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISALIITSGSQWLFPRMGFHGLSARDYIAIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDITRLNSKTALHVFGDFCYLFSTSTVLGVTAGLLTAYILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGVIMSHYAWHNFKDNHQASTSTTSRCMLKVTISVFQWFLHVFSMMSFVAETAIFLYVGMDALDIEKWKITKLSLWKLVGTYTITVFLILLGRAAFVFPLSAISNYFNKREDRSSSSSIITFKQQFTYSGVTRDPTHATMITITTVVVLFTTVVFGFLTKPLIRCLLPLNQATNSASNSGPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLMERPVYTIHFFWRKFDDYYMRPIFGGPCHSNQPSG | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5117043 | 5124508 | - | Cp4.1LG02g00760.1 | Cpe02g00800 | 464749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00800 | 523 | PRINTS | Na+/H+ exchanger signature | 147 | 157 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cpe02g00800 | 523 | PRINTS | Na+/H+ exchanger signature | 92 | 106 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cpe02g00800 | 523 | PRINTS | Na+/H+ exchanger signature | 107 | 115 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cpe02g00800 | 523 | PRINTS | Na+/H+ exchanger signature | 78 | 89 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cpe02g00800 | 523 | Gene3D | - | 139 | 191 | - | - | |
Cpe02g00800 | 523 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 9 | 519 | - | - | |
Cpe02g00800 | 523 | Pfam | Sodium/hydrogen exchanger family | 23 | 439 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cpe02g00800 | 523 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 9 | 519 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00800 | Cpe-Chr2:5117043 | Cpe04g00237 | Cpe-Chr4:2910144 | 0 | dispersed | |
Cpe02g00800 | Cpe-Chr2:5117043 | Cpe12g00971 | Cpe-Chr12:8191682 | 5.85E-174 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00800 | - | - | csv:101217775 | 848.195 |