Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00802 ATGCCTGAGAAAGACAGTCAATGTGTTGCTAAACAGCCTCGTCTCGTGGCTAGAAAGTTTCTGGCTAGGCCTCAACATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGATTTGAGCTGAAATACTTCGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGTCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTTTCTTCCAAGAACAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGGAGTGACAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCCACACAAGAACACCAACCATGTACTTAGACTTCACTCTCAACCCAAAGGCTCATCTCCATCAGCCGATCCCGTCATCCTGGAACGCGTTCGTTTACATTCTCGAGGGCGAGGGCGTCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGACGTGTGGAATAAGTCAGCCAAGGGTGTAAGGTTCATCTTGGTAGGAGGTGAACGACTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAACAAATTGACCAAACCATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCACAAGCTGCAATTTCATAG 897 46.38 MPEKDSQCVAKQPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDGVTVKVIAGEALGAKSPIHTRTPTMYLDFTLNPKAHLHQPIPSSWNAFVYILEGEGVFGSSKATSTTAHNLLLLGFGDGLDVWNKSAKGVRFILVGGERLSEPVVQFGPFVMNTQEQIDQTIDDFDNYTNGFEKARHWRSQAAIS 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5136619 5141398 + Cp4.1LG02g00660.1 Cpe02g00802 464751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00802 298 Gene3D Jelly Rolls 27 279 IPR014710 -
Cpe02g00802 298 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Cpe02g00802 298 PANTHER PIRIN-RELATED 6 297 IPR012093 -
Cpe02g00802 298 CDD cupin_pirin_C 176 251 - -
Cpe02g00802 298 Pfam Pirin 34 126 IPR003829 -
Cpe02g00802 298 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Cpe02g00802 298 Gene3D Jelly Rolls 148 253 IPR014710 -
Cpe02g00802 298 CDD cupin_pirin_N 33 128 - -
Cpe02g00802 298 PIRSF Pirin 12 292 IPR012093 -
Cpe02g00802 298 PANTHER OS09G0484800 PROTEIN 6 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00802 Cpe14g00761 CCT
Cpe02g00802 Cpe06g00791 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00802 Cpe-Chr2:5136619 Cpe03g01269 Cpe-Chr3:10287007 1.65E-145 dispersed
Cpe14g00761 Cpe-Chr14:5978983 Cpe02g00802 Cpe-Chr2:5136619 6.31E-104 wgd
Cpe02g00802 Cpe-Chr2:5136619 Cpe06g00791 Cpe-Chr6:5063967 6.05E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00802 K06911 - csv:101216351 550.821