Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00819 ATGGCCAGCAAAGAAGTGATAGAGCCGCTGTTACCAACGTCGTCTAATACTATTGGAACAAGAATATTAGATATTCCCAGTAGCAAAAGACGATTGAGGCGCACTAAGAGTGCTCCTCATGCGGATTCACCTCAATCAGAGACCACAGGCACAGGCACAGGCACAGGCACAGGCGCAGACACTTGTCCAGTTCCACGTTCAGGATTAATTTTTGGAAATCTTGGTCCGAGTTTAAGAAGAGTAGCCTTAGTTTTAGTACTATACATGGGTATAGGAACTCTATGTTTTTACCTTGTCAGGTACCAAATCAAAGGGGAAAAAACAAACGGAATAGTTGATGCCATTTATTTCACTACTGTGACAATGACAACCGTTGGATATGGAGATCTTGTCCCAAGCAGTCCTTCCACAAAACTACTAGCTTGCGCTTTTGTCTTCTCAGGAATGGCCCTCGTTGGCCTAATACTAAGCAGTGCAGCCGATTATTTGGTAGAGAAGCAGGAAATCTTGCTATTTAAGACATTGAATGCGCACCAAAACGGCCATTGTGACATGACAAAAGAAATTGATACTGATAAAGCCAGAAACAAGTGTATAGTGGTGTTTCTCTTGCTTATTTTGTTCATCATTTCTGGGACTGTTTTTCTTGTTAACATTGAGAAGTTGGGTTTCATTGATGCCTTTTATTGTGTATGTTCTACCATCACTACATTAGGCTATGGAGACAAAAGCTTCTCGACTAAGTCGGGGCGCATCTTCGCCATTTTCTGGATCTTGATAAGTACCATCACACTGGCTCAGTTCTTCCTCTACATTGCTGAGCTAAACACTGAAAGAAGGCAGAAGTCTCTGGTGAAGTGGGTTCTGAGTAAAAAGGTGACAAACTTGGATCTTGAGGCTGCGGATCTCGATAACGACAGGGTCGTCGGGGCTGCAGAATTTGTGATCCACAAGCTGAAAGAGATGGGGAAAATCACAGAAGATGACATTGCACCTGTGCTGAAGGAATTTGAGAAGCTTGATGTTGATCAGTCAGGAACGCTGTCCATATCTGATTTAACACTTGCTCAATCGTCTTAA 1080 42.87 MASKEVIEPLLPTSSNTIGTRILDIPSSKRRLRRTKSAPHADSPQSETTGTGTGTGTGADTCPVPRSGLIFGNLGPSLRRVALVLVLYMGIGTLCFYLVRYQIKGEKTNGIVDAIYFTTVTMTTVGYGDLVPSSPSTKLLACAFVFSGMALVGLILSSAADYLVEKQEILLFKTLNAHQNGHCDMTKEIDTDKARNKCIVVFLLLILFIISGTVFLVNIEKLGFIDAFYCVCSTITTLGYGDKSFSTKSGRIFAIFWILISTITLAQFFLYIAELNTERRQKSLVKWVLSKKVTNLDLEAADLDNDRVVGAAEFVIHKLKEMGKITEDDIAPVLKEFEKLDVDQSGTLSISDLTLAQSS 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5237600 5240821 + Cp4.1LG02g00510.1 Cpe02g00819 464768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00819 359 Gene3D - 181 287 - -
Cpe02g00819 359 PANTHER TWO PORE POTASSIUM CHANNEL A 19 353 - -
Cpe02g00819 359 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 19 353 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe02g00819 359 SUPERFAMILY EF-hand 287 354 IPR011992 -
Cpe02g00819 359 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Cpe02g00819 359 PRINTS Two pore domain K+ channel signature 120 148 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe02g00819 359 PRINTS Two pore domain K+ channel signature 236 245 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe02g00819 359 SUPERFAMILY Voltage-gated potassium channels 78 175 - -
Cpe02g00819 359 Gene3D - 77 173 - -
Cpe02g00819 359 SUPERFAMILY Voltage-gated potassium channels 194 294 - -
Cpe02g00819 359 MobiDBLite consensus disorder prediction 29 60 - -
Cpe02g00819 359 MobiDBLite consensus disorder prediction 39 60 - -
Cpe02g00819 359 Pfam Ion channel 204 275 IPR013099 -
Cpe02g00819 359 Pfam Ion channel 84 164 IPR013099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00819 Cpe-Chr2:5237600 Cpe10g00104 Cpe-Chr10:697807 2.67E-49 dispersed
Cpe09g00642 Cpe-Chr9:4849942 Cpe02g00819 Cpe-Chr2:5237600 8.96E-116 transposed
Cpe02g00819 Cpe-Chr2:5237600 Cpe06g00814 Cpe-Chr6:5207894 1.52E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00819 K05389 - csv:101216032 551.592