Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00834 ATGATTCATTCTGGTTTCTTCCTTGCGGGTCCTTCATTTAATTCTGATGCTACTACATCTTTCATATCGAGTACTGTGTCTGGAGAAGATGGCGCTACGGCTGATGATACCAGAAATGATACCTCTGGTTCCCTCCCTCCTTCTTTTTGGGTTAGAACAGCCATGAGAGTCTCTAGAGCTAGATGGTTCATTTTCTTGAGAAGAGTTTTTCATTACCAAAACGGATCGAGATCTGATCTTGGGCCGAATCCTTTCAATTCAGGTTCATGGATGGCGATGGAACTTGTAGCTTTGTTTTTTCAACTAATCATCTCAGTGTTCACTCTTGCCATTTCACAAACTGAGAAGCCAGTTTGGCCTATGAGATTGTGGATAGCTGGTTATGATCTTGGCTGTGTTCTTAGCTTACTGCTTCTCTGCGGCCGCCATCGGTGTCGTTATCTTATGCAGGGAGATAGTAACAGTCTTTCGGATATCGAGCACCAGAGCAGCAATGAATCATCGAGGTACTCACATTTGATCAACAGATGTCGGACGTTTCTTGATCTTTTCTTTGCAATATGGTTCGTAATGGGCAATCTTTGGATCTTCGATTCTCGGTTTGCGTCGTTTCAAAGAGCTCCCAAGCTACATCTATTATGCAGCTTCGTGCTAGTTTGGAATGCCATATGCTACTCTTTCCCGTTCTTCCTGTTTCTGCTGCTATGTTGCTGTGTGCCAGTGATCAGTAGTCTTATAGGATATAACATCAACATGGGATCGACCGAAAAAGGCGCATTGGACGATCAAATCTCTCAACTACCTTGCTGGAAATACAAAGTCGTCGACGTCAACATCAACCTCGGAATTCAACCCGATAATACCAATACAGGACTCCCAAAAGAGGATCCAGAATGTTGCATCTGTCTTGCCAAGTATATAGACAAGGAAGACGTGAGACAGTTGCCTTGTTCTCATGTGTTCCATCTCAGGTGTGTAGATAAATGGCTTGCTATAGCATCATCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAG 1038 43.45 MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALFFQLIISVFTLAISQTEKPVWPMRLWIAGYDLGCVLSLLLLCGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTFLDLFFAIWFVMGNLWIFDSRFASFQRAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVPVISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNTNTGLPKEDPECCICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5337877 5341608 + Cp4.1LG02g00360.1 Cpe02g00834 464783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00834 345 CDD RING-H2_RNF111_like 297 340 - -
Cpe02g00834 345 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 24 344 - -
Cpe02g00834 345 SMART ring_2 299 339 IPR001841 -
Cpe02g00834 345 ProSiteProfiles Zinc finger RING-type profile. 299 340 IPR001841 -
Cpe02g00834 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 344 IPR013083 -
Cpe02g00834 345 Pfam Ring finger domain 298 340 IPR001841 -
Cpe02g00834 345 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 24 344 - -
Cpe02g00834 345 SUPERFAMILY RING/U-box 293 343 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00834 Cpe06g00833 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00834 Cpe-Chr2:5337877 Cpe06g00833 Cpe-Chr6:5355990 0 dispersed
Cpe02g00834 Cpe-Chr2:5337877 Cpe06g00832 Cpe-Chr6:5350548 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00834 - - csv:101217150 595.504