Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00881 TCGAAATTACCAAATGCGAATAGTGGTTGTTTTTCGACTAATTCTGGGGGTTGGGACTCGAAGGATTTGAGGATTGTGAATTGTCCCTCTCCGAAGCATGGTGGTGGTAGAGTTCTCAAGCGAGCCGACATAGTCTCAGGGCTCGGGTTCTGGAAATTGGGGTTCCCGTGTCTCAGAAGGGATAACTTGGCCATCTTCCAATGGGGAAGGAAGAAAGACCTGGAGGAAGGAAACCCGAATTTGAGATCTGCCAAGTATCGAAGGTCATCTGAACCTGTAGAAAGTATCAATCCCCAATTGAGTTCCTGTGCTCTAAGTGAGGATGAAGAGAAGAGGAAGACAAGGTTGATGAGGAATAGAGAGAGTGCGCAGCTTTCAAGAAAGAGGAAAAAGCATTACGGGGAGGAGTTAGAGGATAAATTGAGAAGTATGCATTCAACCATTACTGAATTGAATAGTAAGATATCATATGTGATGGCTAAGAATGCACTGAGTGGTAGTGGTATGTGTCAGCCTCCTCCTCCTGGTATGTATCCTCATCCCTCAATGGCCCTATTGTCTTATCCCTGGATGCCATGTCTTCCGTATGTTGTTCAACCGCAAGGGTCTCAGGTCCCTCTGGTTCCAATTCCGAGATTAAAGCCCAAACAACCTGCCCTTGCAGCAAAGGGAAAAAGGAATGTGAGTAAGAAGGCTGAGGGAAGAACTAAGAAGGTTGCGAGTGTTAGTTTTCTGGGTCTGTTGTTCTTTATTATGCTCTTTGGTGGGTCTAGTTCCTATAATTTAGAAATGTTGGAGGAGGAGTTCCTCGCCAATAAGTGTTCGAATTTATCTCGTGGGAAATATGATACTTTGATCCTCTTGAAATGTGAGGAAATTCATAGGAAAGGGCGAGACTTGAAATTCGATCAACAACCAAAAGAATTCGAATTTATCTCGAAAAGGCGAGACTTGAAATTCGATCAACAACCAAAAGAATCACAGGCAAGTGAGAAAGCTATGGCCTCTAGCAGGGCTTCTGTTAAGGACAAGGGTAGGGAGACTCGTCTT 1050 44.38 SKLPNANSGCFSTNSGGWDSKDLRIVNCPSPKHGGGRVLKRADIVSGLGFWKLGFPCLRRDNLAIFQWGRKKDLEEGNPNLRSAKYRRSSEPVESINPQLSSCALSEDEEKRKTRLMRNRESAQLSRKRKKHYGEELEDKLRSMHSTITELNSKISYVMAKNALSGSGMCQPPPPGMYPHPSMALLSYPWMPCLPYVVQPQGSQVPLVPIPRLKPKQPALAAKGKRNVSKKAEGRTKKVASVSFLGLLFFIMLFGGSSSYNLEMLEEEFLANKCSNLSRGKYDTLILLKCEEIHRKGRDLKFDQQPKEFEFISKRRDLKFDQQPKESQASEKAMASSRASVKDKGRETRL 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6246997 6248267 - Cp4.1LG02g09000.1 Cpe02g00881 464830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00881 350 Gene3D - 109 162 - -
Cpe02g00881 350 CDD bZIP_HY5-like 112 163 - -
Cpe02g00881 350 Pfam bZIP transcription factor 108 157 IPR004827 GO:0003700|GO:0006355
Cpe02g00881 350 MobiDBLite consensus disorder prediction 97 131 - -
Cpe02g00881 350 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 158 IPR004827 GO:0003700|GO:0006355
Cpe02g00881 350 SUPERFAMILY Leucine zipper domain 111 161 IPR046347 GO:0003700|GO:0006355
Cpe02g00881 350 MobiDBLite consensus disorder prediction 315 350 - -
Cpe02g00881 350 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 70 276 - -
Cpe02g00881 350 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Cpe02g00881 350 MobiDBLite consensus disorder prediction 105 131 - -
Cpe02g00881 350 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 70 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00881 Cpe-Chr2:6246997 Cpe03g00417 Cpe-Chr3:2330568 5.61E-108 dispersed
Cpe02g00881 Cpe-Chr2:6246997 Cpe08g01349 Cpe-Chr8:9718011 1.68E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49041 PF00170 bZIP_1 8.00E-09 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00881 K25783 - csv:101215342 325.865