Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00881 | TCGAAATTACCAAATGCGAATAGTGGTTGTTTTTCGACTAATTCTGGGGGTTGGGACTCGAAGGATTTGAGGATTGTGAATTGTCCCTCTCCGAAGCATGGTGGTGGTAGAGTTCTCAAGCGAGCCGACATAGTCTCAGGGCTCGGGTTCTGGAAATTGGGGTTCCCGTGTCTCAGAAGGGATAACTTGGCCATCTTCCAATGGGGAAGGAAGAAAGACCTGGAGGAAGGAAACCCGAATTTGAGATCTGCCAAGTATCGAAGGTCATCTGAACCTGTAGAAAGTATCAATCCCCAATTGAGTTCCTGTGCTCTAAGTGAGGATGAAGAGAAGAGGAAGACAAGGTTGATGAGGAATAGAGAGAGTGCGCAGCTTTCAAGAAAGAGGAAAAAGCATTACGGGGAGGAGTTAGAGGATAAATTGAGAAGTATGCATTCAACCATTACTGAATTGAATAGTAAGATATCATATGTGATGGCTAAGAATGCACTGAGTGGTAGTGGTATGTGTCAGCCTCCTCCTCCTGGTATGTATCCTCATCCCTCAATGGCCCTATTGTCTTATCCCTGGATGCCATGTCTTCCGTATGTTGTTCAACCGCAAGGGTCTCAGGTCCCTCTGGTTCCAATTCCGAGATTAAAGCCCAAACAACCTGCCCTTGCAGCAAAGGGAAAAAGGAATGTGAGTAAGAAGGCTGAGGGAAGAACTAAGAAGGTTGCGAGTGTTAGTTTTCTGGGTCTGTTGTTCTTTATTATGCTCTTTGGTGGGTCTAGTTCCTATAATTTAGAAATGTTGGAGGAGGAGTTCCTCGCCAATAAGTGTTCGAATTTATCTCGTGGGAAATATGATACTTTGATCCTCTTGAAATGTGAGGAAATTCATAGGAAAGGGCGAGACTTGAAATTCGATCAACAACCAAAAGAATTCGAATTTATCTCGAAAAGGCGAGACTTGAAATTCGATCAACAACCAAAAGAATCACAGGCAAGTGAGAAAGCTATGGCCTCTAGCAGGGCTTCTGTTAAGGACAAGGGTAGGGAGACTCGTCTT | 1050 | 44.38 | SKLPNANSGCFSTNSGGWDSKDLRIVNCPSPKHGGGRVLKRADIVSGLGFWKLGFPCLRRDNLAIFQWGRKKDLEEGNPNLRSAKYRRSSEPVESINPQLSSCALSEDEEKRKTRLMRNRESAQLSRKRKKHYGEELEDKLRSMHSTITELNSKISYVMAKNALSGSGMCQPPPPGMYPHPSMALLSYPWMPCLPYVVQPQGSQVPLVPIPRLKPKQPALAAKGKRNVSKKAEGRTKKVASVSFLGLLFFIMLFGGSSSYNLEMLEEEFLANKCSNLSRGKYDTLILLKCEEIHRKGRDLKFDQQPKEFEFISKRRDLKFDQQPKESQASEKAMASSRASVKDKGRETRL | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6246997 | 6248267 | - | Cp4.1LG02g09000.1 | Cpe02g00881 | 464830 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00881 | 350 | Gene3D | - | 109 | 162 | - | - | |
Cpe02g00881 | 350 | CDD | bZIP_HY5-like | 112 | 163 | - | - | |
Cpe02g00881 | 350 | Pfam | bZIP transcription factor | 108 | 157 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe02g00881 | 350 | MobiDBLite | consensus disorder prediction | 97 | 131 | - | - | |
Cpe02g00881 | 350 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 109 | 158 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe02g00881 | 350 | SUPERFAMILY | Leucine zipper domain | 111 | 161 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe02g00881 | 350 | MobiDBLite | consensus disorder prediction | 315 | 350 | - | - | |
Cpe02g00881 | 350 | PANTHER | BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED | 70 | 276 | - | - | |
Cpe02g00881 | 350 | SMART | brlzneu | 107 | 171 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe02g00881 | 350 | MobiDBLite | consensus disorder prediction | 105 | 131 | - | - | |
Cpe02g00881 | 350 | PANTHER | BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED | 70 | 276 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00881 | Cpe-Chr2:6246997 | Cpe03g00417 | Cpe-Chr3:2330568 | 5.61E-108 | dispersed | |
Cpe02g00881 | Cpe-Chr2:6246997 | Cpe08g01349 | Cpe-Chr8:9718011 | 1.68E-137 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49041 | PF00170 | bZIP_1 | 8.00E-09 | CL0018 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00881 | K25783 | - | csv:101215342 | 325.865 |