Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00884 ATGTCATTAGTCGGGCCATCCGATCCATCTCCGTTGTCGTATGGAACTCGCAAACTCTACTCGTTGAAAGGAACCAAGAATGCTTCCGACTTGTCCACGCAGATATTTGGTTCCGAAAAGAATAGGACGATGTATATGAATGATTCGTATTGCAGTGAGAGCTACGACAAGTATTTCCTTGACTTCCCGATCGAAGAGCTATCGGTTTCTGGCATTTCTACTGACTCGTTTCATCCCAACGCTGCTTTGTATGGGCTAAGGGCTGATTCTCTATCCCCTTTGTGTGATTCGTTTACACGTTTTGATGCTTATCAATCGAACTTATACTCGGTTTGCCTTGAGAGTACAAGTCCAGAACAGCTGGATTTTGAGGATGATCAAGTGAGACAGAAGTTGCAAGAATTGGAGAGAGATCTGCTCGGCGAACCCGATTCTGCTGATTACGAGGATGAGATGTTTGCAAATGGCCAAAGCATGGATATTGATAGCGAATGGGCGAATTCAATTCAAGATGCATTGCTTCATGACTCGCCGAAGGAATCGACATCGATGGATTCTAATTTCAGTACCATCAGTAGCAACAAGGATGCATCTCAAATATCATCACAGAATCCCAGACAGATACTTATAGAATGTGCTTCTGCTATCTCAGAAGACAACTTTGAAGAAGCATCAGCTATGATAGAACAGCTCCGGGGTATGGTCTCGGTTCAGGGAGATCCCTCACAGAGGATCGCAGCGTATTTAGTGGAAGGTCTTGCTGCTCGGTTGTTGGAGTCGGGGAAATGTCTTTATAAAGCCTTGAGATGCAAAGAACCCCCTTCCTCGGACCGTCTCGCAGCTATGCAGATCCTTTTTGAGGTCTGCCCCTGTTTCAAATTTGGCTTCATGGCTGCAAACTGTGCCATTATCGAGGCAGCGAAAGATGAGAAGAGAATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAAATTGATTCAGATGCTAGCAGCTCAGCCAGGTAAGCCACCACATTTGAGGCTAACTGGTGTTGATGACCCTGAATCGGTACAGCGCCCTGTTGGAGGTCTTAGACACATTGGACAAAGGCTCGAGCAGCTGGCGAAAGCGCTGCGTGTTCCATTTGAATTTCACGCAATCGCCTCAAATGCTTTAGATGTCACTCCCTCAATGCTCGCCTCCCGGCCTGGAGAAGCACTCATAGTAAACTTTGCTTTTCTACTTCACCACATGCCAGATGAAAGCGTTTCAACCGTAAATCTACGAGACAGGCTTCTCCGAATGGTTAAGAGCCTGAATCCCAAACTAGTAACAGTCGTCGAACAGGACATGAATGCAAATACGACCCCATTCGTTTCAAGATTCATCGAAACGTATAACTACTACGCAGCTGTGTACGACTCTCTCGATGTAACACTTCCAAGAGATAGTCAAGACAGAATAAATGTAGAAAGACAATGCTTGGCGAAGGACATAGTCAACATTGTAGCTTGTGAAGGTGAAGAAAGAGTAGAGCGATACGAAGTCGCTGGGAAATGGCGGGCAAGAATGACAATGGCTGGCTTCACTTCGTGTTCGATGAGCGAAAAGGTGACCGACCCGATACGTAAGCTTATTATGGAAGAGTATTGCGAGAGATTCAAGATGTATGAGGAAATGGGTACACTCCATTTTGGATGGGAAGAGAAAAGCTTGATAGTTACTTCAGCATGGAGGTAA 1731 45.35 MSLVGPSDPSPLSYGTRKLYSLKGTKNASDLSTQIFGSEKNRTMYMNDSYCSESYDKYFLDFPIEELSVSGISTDSFHPNAALYGLRADSLSPLCDSFTRFDAYQSNLYSVCLESTSPEQLDFEDDQVRQKLQELERDLLGEPDSADYEDEMFANGQSMDIDSEWANSIQDALLHDSPKESTSMDSNFSTISSNKDASQISSQNPRQILIECASAISEDNFEEASAMIEQLRGMVSVQGDPSQRIAAYLVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFHAIASNALDVTPSMLASRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNANTTPFVSRFIETYNYYAAVYDSLDVTLPRDSQDRINVERQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSEKVTDPIRKLIMEEYCERFKMYEEMGTLHFGWEEKSLIVTSAWR 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6289824 6291554 - Cp4.1LG02g08950.1 Cpe02g00884 464833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00884 576 MobiDBLite consensus disorder prediction 178 198 - -
Cpe02g00884 576 Pfam GRAS domain family 206 576 IPR005202 -
Cpe02g00884 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 575 IPR005202 -
Cpe02g00884 576 ProSiteProfiles GRAS family profile. 196 576 IPR005202 -
Cpe02g00884 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 575 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00884 Cpe-Chr2:6289824 Cpe06g00888 Cpe-Chr6:5925360 0 dispersed
Cpe05g00928 Cpe-Chr5:6099157 Cpe02g00884 Cpe-Chr2:6289824 3.19E-65 dispersed
Cpe13g00271 Cpe-Chr13:2108956 Cpe02g00884 Cpe-Chr2:6289824 3.08E-91 dispersed
Cpe16g00623 Cpe-Chr16:6751531 Cpe02g00884 Cpe-Chr2:6289824 2.49E-66 dispersed
Cpe02g00884 Cpe-Chr2:6289824 Cpe16g00391 Cpe-Chr16:5492187 1.88E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49042 PF03514 GRAS 7.80E-131 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00884 - - cmax:111480557 1125.54