Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00940 ATGGCCGCCCTTCACCAAACCGCCGCTTCTCTCCAGGCCAAGCTCCTTCCAACCATTCGAATCTCCCGAACCACACCTGCAAACCTCTCCTTCTCCGCTACTTTTCCTTCTCGCCGACTCCGCCTCGGCCACCTCCGCTCTCAAGCCGCCACTAAAATGTCCACCAGCGCCGCCGGGAGCTACGCCGCCGCGCTCGCGGAAGTCGCCGCCTCAAACGACACGCTCGAGGTCACAAGCGCGGATGTGGAGAAAATCGAGAGCGTGTTCGCGGATCCGCAGTTGTTCGATTTCTTCGCGAATCCGACGATTAAGGTCGAGAAGAAACTGGAGGTGGTTGATGAGATCGCTTCGTCGTTGTCTCTACAGCCGCATACGGAAAATTTCTTGAAGATCCTGGTGGACGCGAAGAGGATCGACATCGTGAAGGAGATCGTGACGGAGTTCGAAACAGTGTACAACAAATTGACGAACACGGAACTTGCGGTGGTGAGTTCGGTTGTGGAATTGGAGGAGCAGCATTTGACGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATCAAGACGCAGATTGATCCAAGTCTTGTGGCTGGATTCACTGTGAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTTAAGAAGCAGCTTGAGGAAATCGCTACTCAGCTTGATCTCGGCAACATTCAACTGACGGTATAA 723 53.39 MAALHQTAASLQAKLLPTIRISRTTPANLSFSATFPSRRLRLGHLRSQAATKMSTSAAGSYAAALAEVAASNDTLEVTSADVEKIESVFADPQLFDFFANPTIKVEKKLEVVDEIASSLSLQPHTENFLKILVDAKRIDIVKEIVTEFETVYNKLTNTELAVVSSVVELEEQHLTQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIATQLDLGNIQLTV 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7719502 7720224 + Cp4.1LG02g09350.1 Cpe02g00940 464889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00940 240 Gene3D - 57 150 IPR026015 -
Cpe02g00940 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 55 157 IPR026015 -
Cpe02g00940 240 PANTHER BNACNNG66500D PROTEIN 26 239 - -
Cpe02g00940 240 PANTHER ATP SYNTHASE DELTA CHAIN 26 239 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 Pfam ATP synthase delta (OSCP) subunit 58 231 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 PRINTS ATP synthase delta subunit signature 126 137 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 PRINTS ATP synthase delta subunit signature 137 151 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 PRINTS ATP synthase delta subunit signature 188 203 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 58 231 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 Hamap ATP synthase subunit delta [atpD]. 53 233 IPR000711 GO:0015986|GO:0046933
Cpe02g00940 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 190 209 IPR020781 GO:0015986|GO:0016020|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00940 Cpe-Chr2:7719502 Cpe08g00605 Cpe-Chr8:3983608 1.32E-21 dispersed
Cpe02g00940 Cpe-Chr2:7719502 Cpe06g00964 Cpe-Chr6:9084013 1.41E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00940 K02113 - csv:101211740 365.155