Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00946 ATGGATACCAAAGGCCGACTCATTGCTGGTTCTCACAACAGAAATGAGTTCGTTCTAATCAATGCTGATGAGGTTGCAAGAGTGACATCTGTGAAAGAGTTGAGCGGGCAAATTTGTCAGATCTGTGGGGATGAGGTAGAAGTCACCGTTGATGGAGAGCCATTTGTTGCGTGTAATGAATGTGCCTTTCCAGTTTGTAGACCTTGCTATGAATATGAAAGAAGAGAGGGCAATCAAGCTTGTCCTCAGTGCAAAACTAGATACAAGCGTCTCAAAGGTAGTCCTCGGGTTGAAGGCGATGAAGAAGAAGATGATATTGATGATCTTGAGAATGAGTTTGACATTGCAAACAAGGATCCCAACAGTTTATCTGAGGCAATGCTCTATCCTCACCTCGCTGTCGGTCGTGGTTCTCATGCTAATGGTTATGGAAATACGGGTTCCGACCTCGACTCATCCGTTCCGACTGATATCCCTCTCCTCACCTATGGCCAAGAGGATGCTGGAATTTCCTCCGATAAGCACGCTCTAATTATTCCTCCTTTTATTAGCCGTGGGAAAAAGGTCCATCCAGTGCCATTCACTGATTCACCCATGTCCGCCAATCCAAGGCCTATGGATCCGAAAAAGGATTTAGCTGTGTATGGATATGGAACTGTTGCGTGGAAGGAACGAATGGAGGACTGGCGGAAGAAACAAAATGAAAGGCTTCAAGTAATTAAGCATGAAGGTGGAGGTGGAAAAGGCGACGACGAGTTCGACGATACAGATTTGCCTATGATGGATGAAGGGAGGCAACCACTTTCTCGAAAACTGCCTATCTCCTCGAGCAAGATAAATCCATACAGAATGATAATTGTACTTCGTATTGTCATCCTTTGCCTCTTTTTCCACTATCGTATCCTCCACCCTGTCTACGAGGCGTATGGTCTGTGGTTAACATCAGTAATATGTGAGATATGGTTTGCTGCATCATGGATATTGGATCAGTTTCCGAAATGGTGCCCCATTGTCCGAGAAACTTACCTTGATCGTTTATCGTTAAGATATGAAAAAGATGGCAAGCCATCTGAGTTGGCTTCTATAGACATTTACGTCAGTACGGTGGATCCATTGAAGGAGCCTCCTCTCATCACAGCGAACACCGTCCTGTCTATCCTTGCTGTCGATTATCCGGTAGACAAGGTTTCATGCTACGTTTCAGATGATGGTGCTGCCATGCTTACTTTTGAAGCCCTTTCGGAAACTTCTGAGTTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAGTTCAATATCGAACCTCGAGCCCCAGAGTGGTATTTTGCCCAGAAGGTCGACTATCTGAAAAACAAAGTTGATCCGACATTCGTCAGGGAACGACGTGCAATGAAGAGGGACTATGAAGAATTTAAAGTTCGAATCAATGGGCTTGTTGCCATGGCTCAAAAAGTTCCCGAAGATGGATGGACAATGCAGGATGGAACTCCATGGCCCGGGAACAACGTCAGGGATCATCCTGGAATGATTCAGGTATTTCTTGGTCAAAACGGGGTTCGTGACTTGGAGGGAAATGAATTACCTCGTCTTGTATATGTATCTCGTGAGAAGAGGCCGGGATTCGATCACCACAAGAAAGCCGGTGCCATGAATGCTCTGGTGCGTGTCTCGGCAATCATCTCCAACGCTCCATACATTTTGAATGTCGATTGTGATCACTACATCAACAACAGCAAGGCACTTAGAGAAGCTATGTGCTTCATGATGGACCCAATTTCTGGAAAAAGAATATGCTATGTGCAGTTTCCACAAAGATTTGATGGGATTGATAGGCACGATCGATACTCAAATCGCAACGTTGTATTCTTCGATATCAACATGAAAGGATTAGATGGCATTCAAGGGCCGATTTATGTCGGAACTGGGTGTGTCTTCAGGAGGCAAGCTCTTTATGGGTATGATGCCCCTGCCAAGAAGAAAGCACCAAGAAGGACTTGTAATTGTCTGCCAAAATGGTGCTGCTGTTGCTGTGGAACTAGAAAGAAGACTAAACCAAAGACCAGTGATAAAAAGAAGTTAAAGACCAAAGATACGTCGAAGCAGATTCACGCACTCGAAAATATCGAGGAAGGTATTGAAGGAATAGATAATGAGAAATCATCACTGATGCCCCAAGTTAAGTTTGAGAAGAAGTTTGGGCAATCACCAGCATTCATTGCTTCCACCCTTATGGAAGATGGTGGCGTGCCTGGAGGCGGGACATCTGCTTCGTTGTTGAAAGAAGCCATCCACGTAATCAGTTGTGGTTATGAAGATAAATCCGAGTGGGGTAAAGAGGTAGGGTGGATCTATGGGTCTGTTACAGAGGATATTTTAACAGGTTTCAAGATGCATTGTCATGGATGGAGATCAGTTTATTGCATTCCTAAAAGGCCAGCATTCAAGGGTTCAGCTCCTATTAACTTGTCCGATCGTCTACACCAAGTTCTTCGGTGGGCTCTTGGATCTGTCGAAATTCTTTTAAGCAGGCACTGCCCAATATGGTACGGATACGGATGTGGTTTGAAATGGCTCGAGCGTTTCTCGTACATAAACTCCGTTGTTTATCCATTGACATCGATTCCATTGATCGCTTATTGTACCCTGCCCGCTGTCTGTCTGCTTACCGGGCAATTTATCGTCCCTGAGCTAAGCAACTATGCGAGTATCATTTTCATGGCCCTTTTCATATCTATAGCAGCAACCGGTATACTAGAAATGCAGTGGGGAGGTGTTGGGATTCACGATTGGTGGAGAAACGAGCAGTTCTGGGTTATCGGTGGTGCATCGTCCCATCTTTTTGCGCTTTTCCAGGGTCTGCTAAAGGTTTTGGCTGGTGTTAACACAAATTTCACGGTCACGTCGAAGGGAGGAGACGATGGGGAGTTTTCGGAGCTTTACCTCTTCAAATGGACATCGTTGTTGGTCCCTCCCTTGACCTTATTGATCATAAACATCATTGGAGTAGTCGTTGGAATTTCAGATGCCATCAACAATGGTTACGACTCATGGGGTCCGCTCATCGGTAAGCTTTTCTTTGCATTCTGGGTTATTGTCCATCTGTATCCATTCCTCAAGGGTTTGATGGGGAAGCAAGACAAGGTACCAACCATTATCATTGTGTGGTCAATTCTTCTATCATCCATCCTGTCACTTTTATGGGTCCGAATCAACCCGTTCCTCGACAAGGGTGGCATTGTATTGGAAGTCTGTGGGTTAAACTGTGACGACTAA 3270 45.05 MDTKGRLIAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEVEVTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRLKGSPRVEGDEEEDDIDDLENEFDIANKDPNSLSEAMLYPHLAVGRGSHANGYGNTGSDLDSSVPTDIPLLTYGQEDAGISSDKHALIIPPFISRGKKVHPVPFTDSPMSANPRPMDPKKDLAVYGYGTVAWKERMEDWRKKQNERLQVIKHEGGGGKGDDEFDDTDLPMMDEGRQPLSRKLPISSSKINPYRMIIVLRIVILCLFFHYRILHPVYEAYGLWLTSVICEIWFAASWILDQFPKWCPIVRETYLDRLSLRYEKDGKPSELASIDIYVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAQKVDYLKNKVDPTFVRERRAMKRDYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDLEGNELPRLVYVSREKRPGFDHHKKAGAMNALVRVSAIISNAPYILNVDCDHYINNSKALREAMCFMMDPISGKRICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKAPRRTCNCLPKWCCCCCGTRKKTKPKTSDKKKLKTKDTSKQIHALENIEEGIEGIDNEKSSLMPQVKFEKKFGQSPAFIASTLMEDGGVPGGGTSASLLKEAIHVISCGYEDKSEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGQFIVPELSNYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKGGDDGEFSELYLFKWTSLLVPPLTLLIINIIGVVVGISDAINNGYDSWGPLIGKLFFAFWVIVHLYPFLKGLMGKQDKVPTIIIVWSILLSSILSLLWVRINPFLDKGGIVLEVCGLNCDD 1089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7956603 7962273 + Cp4.1LG02g09460.1 Cpe02g00946 464895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00946 1089 Pfam Cellulose synthase 362 1076 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe02g00946 1089 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Cpe02g00946 1089 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Cpe02g00946 1089 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 508 654 IPR029044 -
Cpe02g00946 1089 Pfam Zinc-binding RING-finger 30 105 IPR027934 -
Cpe02g00946 1089 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1087 - -
Cpe02g00946 1089 PANTHER CELLULOSE SYNTHASE 1 1087 - -
Cpe02g00946 1089 SUPERFAMILY RING/U-box 28 107 - -
Cpe02g00946 1089 Coils Coil 99 119 - -
Cpe02g00946 1089 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Cpe02g00946 1089 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 881 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00946 Cpe-Chr2:7956603 Cpe17g00494 Cpe-Chr17:3890362 0 dispersed
Cpe02g00946 Cpe-Chr2:7956603 Cpe10g00358 Cpe-Chr10:2114592 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00946 K10999 - csv:101214061 2117.04