Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00968 ATGGCTTTCTGGGTGTTTTTCTTCTTGATCTTTGGTTCTGTTCCGCTTGTTCCTGCTCTTACTCTTGCTTCTGATGTTCAAGCTTTGCAAGTTATATACACCTCATTGAACAGTCCTCCACAGCTGACTGGCTGGATTGGTAGTGGCGGTGATCCATGTGTTGAGTTATGGAAAGGGGTGACTTGTGAAGGCTCTGCTGTTGTCTCCATTGAGATTTCCGGGTTGGGGCTGAATGGCACGATGGGCTATGCGCTCTCGAGCCTTATTTCATTGAGAAATCTTGATATGAGCGACAACAATATTCACGACACGATTCCTTACCAATTACCACCGAACCTCACGAGCCTAAATATGGCAAAAAACAAATTAACTGGTAATCTTCCTTATTCACTTTCCACCATGGCTTCTCTCAATTATCTGAATATGAGCCATAATTTGCTAGCTCAGGCGATAGGAGACGTTTTCACGAATCTTACTTCCCTGGGGACCTTGGACCTTTCTTTCAACAACTTTACCGGGGATCTTCCGATTTCCTTGAGCTCATTGTTGAATATTTCTTCTCTCTTTTTACAGAACAACCAATTGACTGGTTCGCTCAATAATCTTATCAGTTTGCCTCTAACGACGCTAAATGTAGCGAATAATAATTTCAGTGGATGGATACCTCAAGAACTGAAGTCGATCGAAAATTTCATATACGATGGTAATTCATTCGACAACAGTCCTGCACCTCCTCCACCCCCTTTCACTCCACCTCCTCCTGGTCGATCTCGTAACAGCCCCCGACACCCTGGGTCCGGCGGTGGCAACCACACTGCCTCAAGCTCTGATAGCAGTTCATCAAACTCGAAGAAAGGCTTGTCAGTTTTGGAAATAGTAGGGATAATTTTGGGTGCTATAATTTTTGTCCTCATTGTGTTGGTTGCTTTTGCTGTATGCATCCAGAAGAGAAAACGGAAGAACATCGGTCTACGAGCTTCGAGCGGAAGGCTGTCTATTGGCACTAGCGTGAATACGGAGGTGCACGAGCATCGGGTTAAAAGCGTTGCTGCTGTTGCAGATATTAAGCCACTCCCTGCGGAGAAAATGAATCCCGAGAGATTACAAGCGAAAAACGGATCGGTGAAAAGGATAAAGTCCCCTATTACTGCAACTTCTTACACTGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAGTCAAGAATGCATAGTCGGTGAAGGCTCTCTCGGTCGTGTTTACAAAGCCGAGTTTCCAAACGGGAAGATAATGGCAATCAAGAAAATCGACAATGCGGCGTTGTCGCTACAGGAAGAAGACAATTTTCTTGAAGCGGTCTCAAACATGTCAAGATTGAGGCACACGAATATTGTGACACTAAATGGTTATTGCGTCGAGCATGGTCAGCGTCTTCTCGTTTACGAGTTCATTGGAAATGGAAGTTTACACGACATGCTCCATTTTGCTGAAGATAGTAGCAAGACACTGACTTGGAACGCCCGTGTCCGAGTAGCACTTGGAACAGCTCGAGCTTTAGAATACTTGCATGAGGTATGCTTGCCTTCTGTTGTACATAGAAACTTGAAGACAGCAAACATATTACTGGATGAAGAGCTCAACCCCCATTTGTCTGATTCCGGTTTGGCTGCTTTAACGCCCAACACAGAGCGACAGTTCGAGGGTGAGATCGGAGCAGTCGCTTGTGAGATGGGCTACTCCCCAACTTCACGATATTGA 1737 45.08 MAFWVFFFLIFGSVPLVPALTLASDVQALQVIYTSLNSPPQLTGWIGSGGDPCVELWKGVTCEGSAVVSIEISGLGLNGTMGYALSSLISLRNLDMSDNNIHDTIPYQLPPNLTSLNMAKNKLTGNLPYSLSTMASLNYLNMSHNLLAQAIGDVFTNLTSLGTLDLSFNNFTGDLPISLSSLLNISSLFLQNNQLTGSLNNLISLPLTTLNVANNNFSGWIPQELKSIENFIYDGNSFDNSPAPPPPPFTPPPPGRSRNSPRHPGSGGGNHTASSSDSSSSNSKKGLSVLEIVGIILGAIIFVLIVLVAFAVCIQKRKRKNIGLRASSGRLSIGTSVNTEVHEHRVKSVAAVADIKPLPAEKMNPERLQAKNGSVKRIKSPITATSYTVASLQSATNSFSQECIVGEGSLGRVYKAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCVEHGQRLLVYEFIGNGSLHDMLHFAEDSSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDSGLAALTPNTERQFEGEIGAVACEMGYSPTSRY 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8570055 8579112 - Cp4.1LG02g09690.1 Cpe02g00968 464917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00968 578 Gene3D Phosphorylase Kinase; domain 1 360 476 - -
Cpe02g00968 578 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Cpe02g00968 578 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 573 - -
Cpe02g00968 578 MobiDBLite consensus disorder prediction 240 259 - -
Cpe02g00968 578 Pfam Protein kinase domain 401 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00968 578 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8-LIKE ISOFORM X1 10 573 - -
Cpe02g00968 578 SUPERFAMILY Protein kinase-like (PK-like) 379 559 IPR011009 -
Cpe02g00968 578 MobiDBLite consensus disorder prediction 263 283 - -
Cpe02g00968 578 ProSiteProfiles Protein kinase domain profile. 399 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00968 578 Gene3D Ribonuclease Inhibitor 20 250 IPR032675 -
Cpe02g00968 578 SUPERFAMILY L domain-like 22 228 - -
Cpe02g00968 578 Gene3D Transferase(Phosphotransferase) domain 1 477 576 - -
Cpe02g00968 578 MobiDBLite consensus disorder prediction 237 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00968 Cpe-Chr2:8570055 Cpe17g00420 Cpe-Chr17:3144363 1.61E-156 dispersed
Cpe02g00968 Cpe-Chr2:8570055 Cpe20g00626 Cpe-Chr20:3917624 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62225 PF00069 Pkinase 1.70E-27 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00968 - - csv:101216091 938.717