Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00984 | ATGGCTTACGACCATTTGGATCGATCAAAAGGCTATTCAGTTGCTTCTGGGCCAGGTCCAGCTTCAAAGCCTGCATCTGAAATGAAGATCTATCAGTTCTTTGTTTTCTGTATTCCAATTGTTGTCACTTTCATTATTCTCCTCCTGTTCTATCTCCTTTACCTTCGTCGCCGAAGGGCTGATTGGAGCTCCATCCGAATGCGAACCTCTACTGCAGTCACCAACAATGACATCTCAACAGCTGAAGTTGGGTTGAAGAAGGAATTCAGGGAGATGCTTCCCATTATTGTGTACAATGAGTCATTCTTTGTCACTGACACACAATGTTCAGTCTGTTTAGGGGAATACAAAACAGAAGATAAGCTTCAGAAGATACCATCATGTGGGCATGTATTTCACCTTGAATGCATTGATCATTGGCTATCCAACCACACTACTTGCCCGCTCTGTCGCCACTCCGTCCTTTCTCCGTTGCCTCAAACGCCACATGTTCAGATCGATATGGGACTCGAGTCATCGAATGAACAACAACACGAAGAAGCAACTCCCCCAGACAGTAATCAAGCTTGTCAACATACAACATCTCCGGTGTAA | 594 | 44.61 | MAYDHLDRSKGYSVASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRRADWSSIRMRTSTAVTNNDISTAEVGLKKEFREMLPIIVYNESFFVTDTQCSVCLGEYKTEDKLQKIPSCGHVFHLECIDHWLSNHTTCPLCRHSVLSPLPQTPHVQIDMGLESSNEQQHEEATPPDSNQACQHTTSPV | 197 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8896313 | 8898493 | - | Cp4.1LG02g11010.1 | Cpe02g00984 | 464933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00984 | 197 | Pfam | Ring finger domain | 108 | 151 | IPR001841 | - | |
Cpe02g00984 | 197 | SUPERFAMILY | RING/U-box | 93 | 162 | - | - | |
Cpe02g00984 | 197 | MobiDBLite | consensus disorder prediction | 173 | 197 | - | - | |
Cpe02g00984 | 197 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cpe02g00984 | 197 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 157 | IPR013083 | - | |
Cpe02g00984 | 197 | PANTHER | RING-H2 FINGER PROTEIN ATL7-LIKE | 21 | 190 | - | - | |
Cpe02g00984 | 197 | SMART | ring_2 | 109 | 150 | IPR001841 | - | |
Cpe02g00984 | 197 | ProSiteProfiles | Zinc finger RING-type profile. | 109 | 151 | IPR001841 | - | |
Cpe02g00984 | 197 | CDD | RING-H2_EL5_like | 108 | 151 | - | - | |
Cpe02g00984 | 197 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 21 | 190 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00984 | Cpe06g00948 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00984 | Cpe-Chr2:8896313 | Cpe13g00098 | Cpe-Chr13:712130 | 1.63E-26 | dispersed | |
Cpe02g00984 | Cpe-Chr2:8896313 | Cpe06g00948 | Cpe-Chr6:8004463 | 1.48E-88 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00984 | K19039 | - | csv:101219324 | 319.316 |