Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00986 ATGGACGCGATCGAGGAGTTGGGTGAGTTGTCCGAATCGATGCGTCAAGCGGCTGCTTTGCTTGCCGATGAAGATGTTGACGACAATTCTACCTCTGGCGGTTCTTCTCGTAGGGCTACGACTTTTCTCAACGTTGTTGCGTTGGGCAATGTTCTTTCTATAGATTCAATGGACGCGATCGAGGAGTTGGGTGAGTTGTCCGAATCGATGCGTCAAGCGGCTGCTTTGCTTGCCGATGAAGATGTTGACGACAATTCTACCTCTGGCGGTTCTTCTCGTAGGGCTACGACTTTTCTCAACGTTGTTGCGTTGGGCAATGTTGGTGCCGGCAAGTCTGCAGCTTTGAATAGTTTAATTGGGCATCCTGTTCTGCCAACCGGTGAAAATGGCGCTACACGAGCTCCAATTAGCATTGATTTGCAGAGGGATGGTTCTTTGAGTAGTAAATCAATTATTCTGCAGATTGATAATAAATCTCAGCAAGTTTCTGCAAGTGCTTTGCGACATTCTCTACAGGACAGGTTGAGCAAGGGTTCTTCAGGAAAGGGCCGAGATGAAATATATCTAAAGCTTCGCACAAGTACAGCACCTCCACTGAAGTTGATTGACTTACCTGGGCTTGATCAACGGGCAATGGATGATTCTGTGGTTAGTGAATATGCTGAACACAATGATGCAATTTTGCTAGTTATTGTACCAGCTGTTCAGGCTCCTGAAATTGGTTCATCTCGAGCCCTACGAACTGCGAAGGAATTTGATGCAGATGGTACCAGAACCATTGGTGTAATTAGCAAAATTGACCAAGCTTCTTCAGACCAGAAGTCTCTTGCTGCCGTGCAAGCTCTCCTGTTAAATCAAGGGCCAGCACGAGCCTCAGATATCCCATGGGTTGCTGTAATTGGTCAATCGGTTTCGATAGTTACTGCACAGTCCGGATCTGTTGGCTCCGAGAATTCCATGGAGACTGCATGGAGAGCAGAGAGTGAAAGTTTAAAAACTATACTACCTGGTGCCCCTCAAAGTAAGCTAGGTAGGCTAGCTTTAGTTGATGCATTGTCCCAACAGATCCGCAAACGAATGAAAGTCCGGCTTCCTAATCTTCTCTCCGGGTTACAAGGGAAATCACAAATAGTTCAGGATGAGTTAGTTAGGCTTGGTGAGCAAATGGTCAATGGTGTCGAGGGGACTAGAGCTCTAGCTTTGGAACTTTGCCGTGAGTTTGAAGATAAGTTTCTCCAGCACATAGGCTCTGGTGAGGGTGCAGGTTGGAAAATTGTTGCTAGCTTTGAGGGTAGTTTTCCAAATCGAATTAAGCAATTGCCTTTAGACAGACACTTCGATATTAATAATGTGAAGAGGNAAATAGTTCAGGATGAGTTAGTTAGGCTTGGTGAGCAAATGGTCAATGGTGTCNCAGGTTGGAAAATTGTTGCTAGCTTTGAGGGTAGTTTTCCAAATCGAATTAAGCAATTGCCTTTAGACAGACACTTCGATATTAATAATGTGAAGAGGATTGTATTAGAAGCTGATGGTTATCAGCCTTATCTTATATCACCTGAGAAGGGTTTGAGATCTTTAATAAAAGGTGTTTTGGAGCTTGCAAAAGAACCATCACGTCTCTGTGTTGATGAGGTGCACAGAGTTTTGATAGATATTGTTTCTGCTGCTGCTAATGGCACCCCAGGTCTTGGAAGATACCCACCATTCAAAAGAGAGGTTGTGGCCATTGCAAGTGCTGCCCTGGATGGGTTTAAAAATGAATCAAAAAAGATGGTTGTGGCATTAGTTGATATGGAGCGAGCATTTGTCCCACCACAACACTTTATACGTCTTGTACAAAGAAGGATGGAAAGACAGCGCCGGGAAGAGGAAGTGAAGACTAAATCATCAAAAAAAGGGCAAGAGGCTGAACAAGCAGTGTCGAACAGGGCAAGTAGTCCTCAAACAAATAGTCAGCAAGCTGGGGGAAGCTTGAAATCAATGAAAGAAAAACCTAGTAAAGAAGATAAGGAAGTGCAGGAGGGTTCGGGTTTGAAGACAGCAGGTGCTGATGGAGAGATAACAGCTGGTTTCTTGTTAAAGAAAAGTGCAAAAACTAATGGATGGAGCAGGCGATGGTTTGTTTTGAATGCGAAGACTGGAAAGCTTGGATACACCAAGAAGCAAGAAGAGAGACACTTTCGTGGTGTCATTACTTTAGAGGATTGTAATATTGAAGAAGCTACAGATGAGGAAGAGTCTCCACCTCCAAAGAGTTCAAAGGATAAAAAGGCTAATGGGCCCGATTCTGGAAAAGGATCAAGTCTTGTGTTTAAGATTACCAGCAAGGTTCCATATAAAACCGTTTTAAAAGTTCATAGTGCTGTTGTCTTGAAGGCGGAGAGTGCTGCGGACAAGGTGGAATGGATAAACAAGATACGCAATGTCATTCAACCATCCAAAGGAGGACAGATGAGAGGTGTATCCTCCGAAGGTGGTCTTACTATGCGGCAGAGTCTATCTGATGGTTCTCTAGATACTATGGCTCGAAAACCTGCTGATCCTGAAGAAGAGCTGCGGTGGATGTCTCAAGAGGTTCGTGGTTATGTTGAAGCAGTGTTGAATAGTTTGGCTGCTAATGTTCCCAAGGCTGTTGTACTTTGTCAAGTTGAGAAGGCGAAGGAAGACATGCTAAATCAATTATATAGCTCGATCAGTGCCCAAAGCTCTGCAAAGATTGAGGAGCTTCTTCAGGAGGATCATAATGTAAAACGGAGGCGAGAACGTTATCAAAAACAGTCCTCTCTCCTTTCGAAACTGACACGCCAGCTCAGCATTCATGGTAATCAAGCATCTGCTGCTAGTTGGTCCGATGGTAGTCCAGAAAGCAGTCCCAAAACTAGCGGACCACCTGGAGGAGATGACTGGAGATCTGCATTTGATGCTGCTTCTAATGGCCGGGCTGACTACAGAAGATCTTCTTCCAATGGTTACAGTAGATCTATCGATCCCGCACAGAACGGTGACATAAACTCAGGTTCCAACTCTAGCAGCCGTCGAACTCCTATCCGGCTGCCACCAGCACCTCCGCAGTCTTCTGGTTCCAGATACTTCTAG 3096 44.9 MDAIEELGELSESMRQAAALLADEDVDDNSTSGGSSRRATTFLNVVALGNVLSIDSMDAIEELGELSESMRQAAALLADEDVDDNSTSGGSSRRATTFLNVVALGNVGAGKSAALNSLIGHPVLPTGENGATRAPISIDLQRDGSLSSKSIILQIDNKSQQVSASALRHSLQDRLSKGSSGKGRDEIYLKLRTSTAPPLKLIDLPGLDQRAMDDSVVSEYAEHNDAILLVIVPAVQAPEIGSSRALRTAKEFDADGTRTIGVISKIDQASSDQKSLAAVQALLLNQGPARASDIPWVAVIGQSVSIVTAQSGSVGSENSMETAWRAESESLKTILPGAPQSKLGRLALVDALSQQIRKRMKVRLPNLLSGLQGKSQIVQDELVRLGEQMVNGVEGTRALALELCREFEDKFLQHIGSGEGAGWKIVASFEGSFPNRIKQLPLDRHFDINNVKRXIVQDELVRLGEQMVNGVXGWKIVASFEGSFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEVHRVLIDIVSAAANGTPGLGRYPPFKREVVAIASAALDGFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREEEVKTKSSKKGQEAEQAVSNRASSPQTNSQQAGGSLKSMKEKPSKEDKEVQEGSGLKTAGADGEITAGFLLKKSAKTNGWSRRWFVLNAKTGKLGYTKKQEERHFRGVITLEDCNIEEATDEEESPPPKSSKDKKANGPDSGKGSSLVFKITSKVPYKTVLKVHSAVVLKAESAADKVEWINKIRNVIQPSKGGQMRGVSSEGGLTMRQSLSDGSLDTMARKPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDHNVKRRRERYQKQSSLLSKLTRQLSIHGNQASAASWSDGSPESSPKTSGPPGGDDWRSAFDAASNGRADYRRSSSNGYSRSIDPAQNGDINSGSNSSSRRTPIRLPPAPPQSSGSRYF 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8928722 8943198 + Cp4.1LG02g11060.1 Cpe02g00986 464935

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00986 1031 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 95 365 IPR030381 GO:0005525
Cpe02g00986 1031 ProSiteProfiles GED domain profile. 852 945 IPR020850 -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 934 1031 - -
Cpe02g00986 1031 CDD DLP_1 101 365 IPR001401 GO:0003924|GO:0005525
Cpe02g00986 1031 ProSiteProfiles PH domain profile. 685 811 IPR001849 -
Cpe02g00986 1031 Gene3D - 685 805 IPR011993 -
Cpe02g00986 1031 Pfam Dynamin family 101 265 IPR045063 -
Cpe02g00986 1031 Gene3D Dynamin, middle domain 806 920 - -
Cpe02g00986 1031 Pfam Dynamin GTPase effector domain 850 932 IPR003130 GO:0003924|GO:0005525
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 620 681 - -
Cpe02g00986 1031 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 124 133 IPR019762 -
Cpe02g00986 1031 PANTHER DYNAMIN-2A 58 454 - -
Cpe02g00986 1031 SUPERFAMILY PH domain-like 687 811 - -
Cpe02g00986 1031 PANTHER DYNAMIN 2 51 IPR022812 -
Cpe02g00986 1031 PANTHER DYNAMIN-2A 2 51 - -
Cpe02g00986 1031 Coils Coil 906 926 - -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 634 659 - -
Cpe02g00986 1031 PANTHER DYNAMIN 58 454 IPR022812 -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 934 960 - -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 661 675 - -
Cpe02g00986 1031 Gene3D Dynamin, middle domain 464 650 - -
Cpe02g00986 1031 Gene3D - 60 412 IPR027417 -
Cpe02g00986 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 374 IPR027417 -
Cpe02g00986 1031 SMART dynamin_3 67 310 IPR001401 GO:0003924|GO:0005525
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 744 761 - -
Cpe02g00986 1031 Pfam Dynamin central region 317 607 IPR000375 -
Cpe02g00986 1031 Pfam PH domain 690 810 IPR001849 -
Cpe02g00986 1031 PRINTS Dynamin signature 254 270 IPR022812 -
Cpe02g00986 1031 PRINTS Dynamin signature 123 140 IPR022812 -
Cpe02g00986 1031 PRINTS Dynamin signature 98 116 IPR022812 -
Cpe02g00986 1031 PRINTS Dynamin signature 235 253 IPR022812 -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 738 767 - -
Cpe02g00986 1031 MobiDBLite consensus disorder prediction 981 1015 - -
Cpe02g00986 1031 SMART GED_2 847 933 IPR003130 GO:0003924|GO:0005525
Cpe02g00986 1031 SMART PH_update 686 813 IPR001849 -
Cpe02g00986 1031 PANTHER DYNAMIN-2A 456 963 - -
Cpe02g00986 1031 PANTHER DYNAMIN 456 963 IPR022812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00986 K01528 DNM1_3; dynamin 1/3 [EC:3.6.5.5] - csv:101220753 1611.28
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe02g00986 Cpe06g00975 CCT
Cpe02g00986 Cpe06g00975 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02620 Cpe-Chr1:21196209 Cpe02g00986 Cpe-Chr2:8928722 0 dispersed
Cpe02g00986 Cpe-Chr2:8928722 Cpe13g01167 Cpe-Chr13:9220196 1.21E-15 dispersed
Cpe02g00986 Cpe-Chr2:8928722 Cpe06g00975 Cpe-Chr6:9238425 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1716 Blo01g01682 Blo12g00812 . Bda03g00360 Bpe02g00260 Bpe04g00320 Bma04g00337 Bma01g02448 . . Cma01g00877 Cma09g01291 Car01g00802 . Sed03g0698 Cpe06g00975 . Bhi04g02550 Tan11g0043 Cmetu03g0129 . Hepe02g3468 . Lcy10g2361 Cla08g00152 Cam08g0148 Cec08g0103 Cco08g0213 . Cmu08g0149 Cre08g0132 Cone4ag1154 . . . . . . Cme09g00107 . . Bda11g00922 . . . . . Sed11g1774 Cmo01g00920 Cmo09g01249 . . . Car09g01106 . Cpe02g00986 Bhi06g00143 Tan10g1858 Cmetu09g1009 . . . . Cla11g00799 Cam11g0836 Cec11g0820 Cco11g0822 Clacu11g1022 Cmu11g0885 Cre11g1279 Lsi08g00154 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001593 2 2 2 2 2 2 3 2 2 2 2 2 3 2 2 4 2 2 4 2 2 2 2 2 2 2 2 4 3 2 69
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe02g00986 Cpe_Chr02 FPKM 4.201153 3.820935 0.635204 0.797505 2.441646 2.473916 2.947971 1.86788 2.182422 2.029723