Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01011 | ATGGGCTGCATTTGCTCAAGAGATTCCTCAGGACCAGAAGATAGCAGTCAGAAAGAGTCTAGAACGGGAAAAGATGTGAACAAATCATCAGTTCAATTGGTTGCTCCTTCTCCCTCTAAAGGAGAGGATTTGTTGTCAGAGATTAAGTTGTCAAGGCAGGCATCTAAAGCAAATGGAGGTTCTGTTCATAAAGCAAAGGCCAATGGAGGTTCTGTTCATAAAACAAAGGCCAATGGAGGGTCTGTCCATCGAGCAAGGGAGGACGATGAATCCATTAAGCCTGCAAAAGCAAAAGCAGATAATACTTCGGCAGCTGGAAGAAAGCCCGACATTTTTAGGTTAGCTAGCTTGTCTAAAGTTGCAGAAGCTGAATATGTGATGGCTGGATGGCCTTCATGGTTAGCTTCTGTTGCTGGAGAAGCCATTAAAGGGTGGGTTCCCCGCCGGATTGACTCCTTTGAGAAGTTAGAAAAAATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGAGACCTTGAAACTGGAAAAACTGTGGCATTGAAAAAAGTGAGATTTGTAAATATGGATCGAGAAAGTGTCCGTTTTATGGCCAGGGAAATCTATATTTTGCGTAAACTTGATCATCCAAATGTTATGAAGCTTGAGGGTTTAGTTACTTCCAAAATGTCGGGTAGCTTGCACCTTGTTTTCGAGTACATGGACCATGACCTTGCAGGCCTTGCTTCAGCTCCTGGACATAAGTTTTCTGAGGCTCAGATTAAATGTTATGTGCAACAATTGATGCAAGGACTCGAACACTGTCATAGTCGAGGAATTCTGCACCGAGATATCAAAGGTTCAAATCTTCTCATTGACGATAATGGTGTGCTCAAGATTGGAGACTTTGGTCTAGCTACCTGTTTTCAACCTGATCAAAAGCAGCCATTGACCAGTCGGGTGGTGACATTGTGGTACAGGGCACCTGAGCTTTTGCTTGGTGCTACTGAATATGGACCCGCCATAGATCTCTGGAGCTGTGGCTGTATCGTTGCTGAACTATTTGCTGGAAAGCCTATTATGCCGGGAAGAACAGAGGTGGAACAAATGCACAAAATTTTTAAGCTCTGTGGTTCACCGTCTGAGGAGTTCTGGCGGAGAACAAAGTTGCCACTTTCAACCAGCTTCAAACCTCAACACCGTTATAAAAGCTGCATTTCTGAAACATTCAAAAGTTTCCCTCCTCCAGCTCTGGCTCTTGTTAATAAACTACTTGCTATTGAACCAGAGCACAGAGGATCCGCTACCGAAGTTCTCAGAAGTGAGTTTTTCAGAACAGAACCTCTCCCTTGTGACCCTTCAAGCTTACCAAAATATCCTCCAAGCAAGGAATTCGATGCAAAGCTCCGGAATGAAGAAGAAAGAAAGAGAAAAGCAGAAGCTGTGAAGGGACATCATCCCGAATCAGTAAGAAGGGGCTTGAGAGACAACAAGGCTGCTCCGACTCCCGAGTTCAACACTCAAGGAGACTATACGATTAAGGTACACCCGATTGCTAAAAAGATGAGTATGAAATACAACCCTCAAGAGGACGGTGAGCCTCCTCGAGTTGCTCAGAGTCGGTACACCCACTCAACATCTATGGTGCACCCGACTATTGCAAGTTCATGGTGTAAGCCCACCGGGGCATCAAGAAATTGTGCAGATTTGAGGACACAGAAATCTCAGATGCATCAGACAGTGGGCGATTCGGCAACCTCTTCGCTTACGAAGGAGGACGGAGTGTGTACTAAAGATTCTGGAATGGGATATGTGCAAAAGAACAGAATACATTACTCGGGACCGTTAGTGCCTGCAGGAGGAAGCATTATTGAAGACATGCTGAAAGAGCATGAGAGACAAATCCAGCAGGCTTTTAGAAAGGCGAAGACGAATAAGAGTTATGATGAGCTTTAA | 1935 | 44.7 | MGCICSRDSSGPEDSSQKESRTGKDVNKSSVQLVAPSPSKGEDLLSEIKLSRQASKANGGSVHKAKANGGSVHKTKANGGSVHRAREDDESIKPAKAKADNTSAAGRKPDIFRLASLSKVAEAEYVMAGWPSWLASVAGEAIKGWVPRRIDSFEKLEKIGQGTYSSVYKARDLETGKTVALKKVRFVNMDRESVRFMAREIYILRKLDHPNVMKLEGLVTSKMSGSLHLVFEYMDHDLAGLASAPGHKFSEAQIKCYVQQLMQGLEHCHSRGILHRDIKGSNLLIDDNGVLKIGDFGLATCFQPDQKQPLTSRVVTLWYRAPELLLGATEYGPAIDLWSCGCIVAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRRTKLPLSTSFKPQHRYKSCISETFKSFPPPALALVNKLLAIEPEHRGSATEVLRSEFFRTEPLPCDPSSLPKYPPSKEFDAKLRNEEERKRKAEAVKGHHPESVRRGLRDNKAAPTPEFNTQGDYTIKVHPIAKKMSMKYNPQEDGEPPRVAQSRYTHSTSMVHPTIASSWCKPTGASRNCADLRTQKSQMHQTVGDSATSSLTKEDGVCTKDSGMGYVQKNRIHYSGPLVPAGGSIIEDMLKEHERQIQQAFRKAKTNKSYDEL | 644 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9322587 | 9326771 | + | Cp4.1LG02g10740.1 | Cpe02g01011 | 464960 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01011 | 644 | SMART | serkin_6 | 153 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01011 | 644 | Gene3D | Transferase(Phosphotransferase) domain 1 | 236 | 477 | - | - | |
Cpe02g01011 | 644 | ProSitePatterns | Protein kinases ATP-binding region signature. | 159 | 182 | IPR017441 | GO:0005524 | |
Cpe02g01011 | 644 | Pfam | Protein kinase domain | 153 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01011 | 644 | PANTHER | CELL DIVISION PROTEIN KINASE | 92 | 637 | - | - | |
Cpe02g01011 | 644 | ProSiteProfiles | Protein kinase domain profile. | 153 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01011 | 644 | CDD | STKc_CDK9_like | 153 | 437 | - | - | |
Cpe02g01011 | 644 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 92 | 637 | - | - | |
Cpe02g01011 | 644 | Coils | Coil | 455 | 475 | - | - | |
Cpe02g01011 | 644 | Gene3D | Phosphorylase Kinase; domain 1 | 140 | 235 | - | - | |
Cpe02g01011 | 644 | MobiDBLite | consensus disorder prediction | 80 | 96 | - | - | |
Cpe02g01011 | 644 | MobiDBLite | consensus disorder prediction | 1 | 104 | - | - | |
Cpe02g01011 | 644 | MobiDBLite | consensus disorder prediction | 568 | 587 | - | - | |
Cpe02g01011 | 644 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 273 | 285 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe02g01011 | 644 | SUPERFAMILY | Protein kinase-like (PK-like) | 146 | 445 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01674 | Cpe-Chr1:10528187 | Cpe02g01011 | Cpe-Chr2:9322587 | 1.21E-165 | dispersed | |
Cpe02g01011 | Cpe-Chr2:9322587 | Cpe14g00334 | Cpe-Chr14:2027755 | 0 | dispersed | |
Cpe01g02197 | Cpe-Chr1:18687701 | Cpe02g01011 | Cpe-Chr2:9322587 | 9.88E-108 | transposed | |
Cpe16g00933 | Cpe-Chr16:8608624 | Cpe02g01011 | Cpe-Chr2:9322587 | 7.19E-117 | transposed | |
Cpe02g01011 | Cpe-Chr2:9322587 | Cpe06g01003 | Cpe-Chr6:10156486 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62227 | PF00069 | Pkinase | 1.20E-70 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01011 | K08819 | - | csv:101208709 | 1070.84 |