Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01011 ATGGGCTGCATTTGCTCAAGAGATTCCTCAGGACCAGAAGATAGCAGTCAGAAAGAGTCTAGAACGGGAAAAGATGTGAACAAATCATCAGTTCAATTGGTTGCTCCTTCTCCCTCTAAAGGAGAGGATTTGTTGTCAGAGATTAAGTTGTCAAGGCAGGCATCTAAAGCAAATGGAGGTTCTGTTCATAAAGCAAAGGCCAATGGAGGTTCTGTTCATAAAACAAAGGCCAATGGAGGGTCTGTCCATCGAGCAAGGGAGGACGATGAATCCATTAAGCCTGCAAAAGCAAAAGCAGATAATACTTCGGCAGCTGGAAGAAAGCCCGACATTTTTAGGTTAGCTAGCTTGTCTAAAGTTGCAGAAGCTGAATATGTGATGGCTGGATGGCCTTCATGGTTAGCTTCTGTTGCTGGAGAAGCCATTAAAGGGTGGGTTCCCCGCCGGATTGACTCCTTTGAGAAGTTAGAAAAAATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGAGACCTTGAAACTGGAAAAACTGTGGCATTGAAAAAAGTGAGATTTGTAAATATGGATCGAGAAAGTGTCCGTTTTATGGCCAGGGAAATCTATATTTTGCGTAAACTTGATCATCCAAATGTTATGAAGCTTGAGGGTTTAGTTACTTCCAAAATGTCGGGTAGCTTGCACCTTGTTTTCGAGTACATGGACCATGACCTTGCAGGCCTTGCTTCAGCTCCTGGACATAAGTTTTCTGAGGCTCAGATTAAATGTTATGTGCAACAATTGATGCAAGGACTCGAACACTGTCATAGTCGAGGAATTCTGCACCGAGATATCAAAGGTTCAAATCTTCTCATTGACGATAATGGTGTGCTCAAGATTGGAGACTTTGGTCTAGCTACCTGTTTTCAACCTGATCAAAAGCAGCCATTGACCAGTCGGGTGGTGACATTGTGGTACAGGGCACCTGAGCTTTTGCTTGGTGCTACTGAATATGGACCCGCCATAGATCTCTGGAGCTGTGGCTGTATCGTTGCTGAACTATTTGCTGGAAAGCCTATTATGCCGGGAAGAACAGAGGTGGAACAAATGCACAAAATTTTTAAGCTCTGTGGTTCACCGTCTGAGGAGTTCTGGCGGAGAACAAAGTTGCCACTTTCAACCAGCTTCAAACCTCAACACCGTTATAAAAGCTGCATTTCTGAAACATTCAAAAGTTTCCCTCCTCCAGCTCTGGCTCTTGTTAATAAACTACTTGCTATTGAACCAGAGCACAGAGGATCCGCTACCGAAGTTCTCAGAAGTGAGTTTTTCAGAACAGAACCTCTCCCTTGTGACCCTTCAAGCTTACCAAAATATCCTCCAAGCAAGGAATTCGATGCAAAGCTCCGGAATGAAGAAGAAAGAAAGAGAAAAGCAGAAGCTGTGAAGGGACATCATCCCGAATCAGTAAGAAGGGGCTTGAGAGACAACAAGGCTGCTCCGACTCCCGAGTTCAACACTCAAGGAGACTATACGATTAAGGTACACCCGATTGCTAAAAAGATGAGTATGAAATACAACCCTCAAGAGGACGGTGAGCCTCCTCGAGTTGCTCAGAGTCGGTACACCCACTCAACATCTATGGTGCACCCGACTATTGCAAGTTCATGGTGTAAGCCCACCGGGGCATCAAGAAATTGTGCAGATTTGAGGACACAGAAATCTCAGATGCATCAGACAGTGGGCGATTCGGCAACCTCTTCGCTTACGAAGGAGGACGGAGTGTGTACTAAAGATTCTGGAATGGGATATGTGCAAAAGAACAGAATACATTACTCGGGACCGTTAGTGCCTGCAGGAGGAAGCATTATTGAAGACATGCTGAAAGAGCATGAGAGACAAATCCAGCAGGCTTTTAGAAAGGCGAAGACGAATAAGAGTTATGATGAGCTTTAA 1935 44.7 MGCICSRDSSGPEDSSQKESRTGKDVNKSSVQLVAPSPSKGEDLLSEIKLSRQASKANGGSVHKAKANGGSVHKTKANGGSVHRAREDDESIKPAKAKADNTSAAGRKPDIFRLASLSKVAEAEYVMAGWPSWLASVAGEAIKGWVPRRIDSFEKLEKIGQGTYSSVYKARDLETGKTVALKKVRFVNMDRESVRFMAREIYILRKLDHPNVMKLEGLVTSKMSGSLHLVFEYMDHDLAGLASAPGHKFSEAQIKCYVQQLMQGLEHCHSRGILHRDIKGSNLLIDDNGVLKIGDFGLATCFQPDQKQPLTSRVVTLWYRAPELLLGATEYGPAIDLWSCGCIVAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRRTKLPLSTSFKPQHRYKSCISETFKSFPPPALALVNKLLAIEPEHRGSATEVLRSEFFRTEPLPCDPSSLPKYPPSKEFDAKLRNEEERKRKAEAVKGHHPESVRRGLRDNKAAPTPEFNTQGDYTIKVHPIAKKMSMKYNPQEDGEPPRVAQSRYTHSTSMVHPTIASSWCKPTGASRNCADLRTQKSQMHQTVGDSATSSLTKEDGVCTKDSGMGYVQKNRIHYSGPLVPAGGSIIEDMLKEHERQIQQAFRKAKTNKSYDEL 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9322587 9326771 + Cp4.1LG02g10740.1 Cpe02g01011 464960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01011 644 SMART serkin_6 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01011 644 Gene3D Transferase(Phosphotransferase) domain 1 236 477 - -
Cpe02g01011 644 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Cpe02g01011 644 Pfam Protein kinase domain 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01011 644 PANTHER CELL DIVISION PROTEIN KINASE 92 637 - -
Cpe02g01011 644 ProSiteProfiles Protein kinase domain profile. 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01011 644 CDD STKc_CDK9_like 153 437 - -
Cpe02g01011 644 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 92 637 - -
Cpe02g01011 644 Coils Coil 455 475 - -
Cpe02g01011 644 Gene3D Phosphorylase Kinase; domain 1 140 235 - -
Cpe02g01011 644 MobiDBLite consensus disorder prediction 80 96 - -
Cpe02g01011 644 MobiDBLite consensus disorder prediction 1 104 - -
Cpe02g01011 644 MobiDBLite consensus disorder prediction 568 587 - -
Cpe02g01011 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Cpe02g01011 644 SUPERFAMILY Protein kinase-like (PK-like) 146 445 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01674 Cpe-Chr1:10528187 Cpe02g01011 Cpe-Chr2:9322587 1.21E-165 dispersed
Cpe02g01011 Cpe-Chr2:9322587 Cpe14g00334 Cpe-Chr14:2027755 0 dispersed
Cpe01g02197 Cpe-Chr1:18687701 Cpe02g01011 Cpe-Chr2:9322587 9.88E-108 transposed
Cpe16g00933 Cpe-Chr16:8608624 Cpe02g01011 Cpe-Chr2:9322587 7.19E-117 transposed
Cpe02g01011 Cpe-Chr2:9322587 Cpe06g01003 Cpe-Chr6:10156486 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62227 PF00069 Pkinase 1.20E-70 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01011 K08819 - csv:101208709 1070.84