Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01024 ATGCAGAAACTGTTGCGATTAAACCCTTCGTCTTCTTCCTCAGCCCCCATTCTCTGTACTGCTGTTAAACCCTTTTCTTCTCTACCTTCCAAGACCACCCTCTTCAGCCCTAAACCACCGCAGCAGCCTCTTCTTATGTCGGCTGCTACTTCATTTCATAGCGGCGTCACTGGCTCTGCCTTTTCCGCTTCCTCTCTTGTCAGAAAACCCTCTTCCGCCGTTGTGTCTTCTCGCTTCGTCGCCGCTAATTCGTCGAGAAATTGCTACTTGTGCCGGTGCGCAATCGAAACCCCTGCCGCATTGCGAGCGTGGTTTGTGTTTAAGGATAATCGAAATGGGTTACGACGGCCGGCGTGGGTGCACACGGATTCTGATGGGTTGTTTTCTTCTTCTGGTGTTGAGGAGCTGAAGAGCTCGAGAGTGGCTGTGGCTGGTGATAATGGTGGAGATGGAGATGAAATGGTGTGTGATAATGGTGGAGAAAGTGGGAAGGTTTTGGAGGAAAAAGGGTCTAAGTCGAATAGGAGGCAGAAGAGTTTGTCTGGTGGAAGCGTGTTGGTTGGTGATCCTGATTTGTTGACCATTCCTGGTGTTGGTCCAAGGAATTTGAAGAAGCTAGTGGAGAAGGGGATTGGAGGAGTGGCTGAGCTCAAGCAGTTGTATAAAGATAAGTTCTTTGGTGATTCTAGCCCGAAGATGGTTGAGTTCTTACAGAGTTCTGTTGGAATTATCCACAGAAATCATGCTGAAAGTATAACTGCTTATATAAAAGACAGTGTCGATGAAGAGTTGACAGAGGACAGTTCAAACAAAGATGCAAAGCCATCTCAGAAGAAACGGATTACATTCTGTGTCGAGGGAAATATTAGTGTTGGAAAGACGACATTTCTTCAAAGAATAGCTAATGAAACTCTTGAGCTACGTGACCTGGTTGAAGTGGTTCCAGAACCTATTGACAAGTGGCAGGATATAGGACCTGACCACTTCAATATACTAGATGCATTTTATGCCGAGCCTGAAAGATATGCTTATACTTTCCAGAATTATGTGTTTGTCACAAGAGTTATGCAGGAGAGGGAGTCTTCTGGTGGAATCAAGCCACTCAGGTTGATGGAAAGGAGCGTTTTCAGTGACCGAATGGTGTTTGTGAGAGCTGTTCATGAAGCAAATTGGATGAATGAGATGGAGATCAGCATCTATGACTCGTGGTTTGATCCAGTTGTATCAACCTTGCCTGGGTTAATTCCTGATGGTTTCATCTATCTTAGAGCAAGCCCTGATACATGCCACAAAAGAATGAAGCTGCGTAAGAGAACTGAGGAAGGTGGGGTCAGTTTAGAGTACCTCCGTGACCTGCACGAGAAGCACGAAAGCTGGCTGTTCCCTTTCCAAAGTGGTAACCATGGGGTTCTATCTGTCAGTAAGCTGCCATTTCATCTAGACAGTTCTTTACACCCTGATATTAGGGATCGTGTCTTTTTCTTGGAGGGTGACCATATGCATAGAAGCATTCAGAAGGTGCCTGCATTGGTTCTTGATTGTGAACCAAACATTGATTTCAGCAAAGACATTGATGCTAAGAGACAGTATGCTCGTCAAGTTGCCGAATTCTTTGCATTTGTAAAGAAGAAGAACGAAGCGTCTTCATCAACCGCTGGGCAGGACGGTGGAAATGGTTCCCAACCACAAGTAATGCTGCCAAACAAAGGATTATGGGTACCGGGCGGGAATCATTTCCCAGAATCAGCTCTGAAATCATTGGATTTCAGGCGGGCAATGTCGATGATGTCTGGTTAG 1797 45.8 MQKLLRLNPSSSSSAPILCTAVKPFSSLPSKTTLFSPKPPQQPLLMSAATSFHSGVTGSAFSASSLVRKPSSAVVSSRFVAANSSRNCYLCRCAIETPAALRAWFVFKDNRNGLRRPAWVHTDSDGLFSSSGVEELKSSRVAVAGDNGGDGDEMVCDNGGESGKVLEEKGSKSNRRQKSLSGGSVLVGDPDLLTIPGVGPRNLKKLVEKGIGGVAELKQLYKDKFFGDSSPKMVEFLQSSVGIIHRNHAESITAYIKDSVDEELTEDSSNKDAKPSQKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEVVPEPIDKWQDIGPDHFNILDAFYAEPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEANWMNEMEISIYDSWFDPVVSTLPGLIPDGFIYLRASPDTCHKRMKLRKRTEEGGVSLEYLRDLHEKHESWLFPFQSGNHGVLSVSKLPFHLDSSLHPDIRDRVFFLEGDHMHRSIQKVPALVLDCEPNIDFSKDIDAKRQYARQVAEFFAFVKKKNEASSSTAGQDGGNGSQPQVMLPNKGLWVPGGNHFPESALKSLDFRRAMSMMSG 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9394977 9398303 - Cp4.1LG02g10660.1 Cpe02g01024 464973

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01024 598 Pfam Deoxynucleoside kinase 283 537 IPR031314 -
Cpe02g01024 598 Gene3D - 281 539 IPR027417 -
Cpe02g01024 598 MobiDBLite consensus disorder prediction 548 567 - -
Cpe02g01024 598 CDD dNK 283 471 IPR031314 -
Cpe02g01024 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 544 IPR027417 -
Cpe02g01024 598 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 130 591 - -
Cpe02g01024 598 MobiDBLite consensus disorder prediction 548 565 - -
Cpe02g01024 598 PANTHER DEOXYNUCLEOSIDE KINASE 130 591 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01024 - - - cmax:111471981 1164.06
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1592 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cpe02g01024 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012551 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe02g01024 Cpe_Chr02 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0