Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01045 | ATGGGGTGTGTCAACACGAAGCATGCCGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCCACGGCGATCGGCAACTCGGGTCGGAGCCGACTTGGGTTTGGGGAGATTGACAAGGGTTCGAAGCCGAAGTCCAAGACGAGGACGAAAGGGTCCAGTGACTTTAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGAGCGAGTTCTAATGGCGGTGGGAATGATACTTTGAGCTTCCGAATCGGGAATTTTAATAAGTATATGGAAAGTGAGCAAGTGGCGGCGGGATGGCCTGCTTGGCTCTGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGCTCTGATGCCTATGAAAAATTGGAGAAGATTGGACAAGGTACATATAGTACTGTATTCCGAGCACGTGAACTCGAGACAGGAAGGATAGTCGCTTTAAAGAAGGTCCGTTTCGATAATTTCGAGCCCGAAAGTGTTCGGTTTATGGCACGAGAGATCATGATTCTCCGCAGGCTTGATCACCCCAATATCATCAAATTGGAGGGCTTAATCACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGATCATGACATTACTGGACTCTTGTCTTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGTTACATGAAACAATTGTTATCCGGGCTCGAGCATTGTCACTCACGTGGCGTAATGCATCGAGATATTAAAGGGTCTAATCTTCTAGTCAATAACGAAGGGGTATTGAAGGTGGCTGATTTTGGTTTGGCAAACTTCTGTAATTCGGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACGCTATGGTATCGTCCTCCTGAACTTCTACTCGGCTCCACAGACTATAATGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTTGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAGCTTCCACATGCCACTTTGTTCAAACCACAACATCCTTACAATAATTGTTTACGGCAGACGTTCAAAGATTATCCTTCGACGACCGTGAACTTGTTAGAAACTCTTCTTTCTGTCGAACCATACAAGCGCGGAGTTGCATCCTCTGCTCTCACATCTGAGATACTAGAACCAAATAATCAGTGTTCTTTGTCTAATGCTATATCCTTTGTGGGTTCTTTCAGTATTTCAGTACAAAACCGCATGCATGTGATCCATCAAGCATGCCAATATATCCACCAAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCTAGAAGCTCGAGATTTGCATAAGATTAGTATTAATGCTCAAAATCTTAAAGAAGAGAAGGTTATCAAAGGTGGTGAGGTGAAAAAGGTTTTAAATGATAAATTGCAAGAGTCTATGCATGTAAAGAATGCATCCCAAGGAGACATTCCTTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGAAGCGTCTATTAGATCGCATTCGAGATCGATTTCACGAGGACACGTAATTAATGGGCTGGATCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTTGTCCATCAGCTGTTCAAGTTCGAAGGGACGTGAATCAAACGAGAGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGAGCGTCCCGATTCGTTTGATGCTTCGGATGAGTACCATTCGCAGGATTTTTCAGTGGCACTTTACTTGCAAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATACTCTGGGCCCTTGTTATCTCAATCGAGCCGAGTGGATGAACTCCTAGACAGACACGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGAATCATCCGTTCTCACACCTGTAGGTAAAAATTGA | 2073 | 45.3 | MGCVNTKHAVSVTPAFDHSGVFRDNESTAIGNSGRSRLGFGEIDKGSKPKSKTRTKGSSDFNGVASEFGESGRASSNGGGNDTLSFRIGNFNKYMESEQVAAGWPAWLCAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSTVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSEILEPNNQCSLSNAISFVGSFSISVQNRMHVIHQACQYIHQAKRLMQNKERSLEARDLHKISINAQNLKEEKVIKGGEVKKVLNDKLQESMHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDEASIRSHSRSISRGHVINGLDHSAILHSRSNVDSKFHEKGDMLSISCSSSKGRESNERSKVVIRNQWGKFERPDSFDASDEYHSQDFSVALYLQDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRESSVLTPVGKN | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9640923 | 9644756 | + | Cp4.1LG02g10550.1 | Cpe02g01045 | 464994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01045 | 690 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe02g01045 | 690 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 458 | - | - | |
Cpe02g01045 | 690 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 209 | - | - | |
Cpe02g01045 | 690 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 156 | IPR017441 | GO:0005524 | |
Cpe02g01045 | 690 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 410 | IPR011009 | - | |
Cpe02g01045 | 690 | MobiDBLite | consensus disorder prediction | 56 | 79 | - | - | |
Cpe02g01045 | 690 | ProSiteProfiles | Protein kinase domain profile. | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01045 | 690 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 55 | 678 | - | - | |
Cpe02g01045 | 690 | CDD | STKc_CDK9_like | 127 | 409 | - | - | |
Cpe02g01045 | 690 | PANTHER | CELL DIVISION PROTEIN KINASE | 55 | 678 | - | - | |
Cpe02g01045 | 690 | Pfam | Protein kinase domain | 127 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01045 | 690 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Cpe02g01045 | 690 | SMART | serkin_6 | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01045 | 690 | MobiDBLite | consensus disorder prediction | 23 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01045 | Cpe-Chr2:9640923 | Cpe03g01388 | Cpe-Chr3:11172333 | 2.49E-177 | dispersed | |
Cpe01g02414 | Cpe-Chr1:20078333 | Cpe02g01045 | Cpe-Chr2:9640923 | 0 | wgd | |
Cpe13g00969 | Cpe-Chr13:8076437 | Cpe02g01045 | Cpe-Chr2:9640923 | 0 | wgd | |
Cpe02g01045 | Cpe-Chr2:9640923 | Cpe20g00057 | Cpe-Chr20:281924 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62228 | PF00069 | Pkinase | 5.10E-68 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01045 | - | - | csv:101220347 | 1116.29 |