Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01045 ATGGGGTGTGTCAACACGAAGCATGCCGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCCACGGCGATCGGCAACTCGGGTCGGAGCCGACTTGGGTTTGGGGAGATTGACAAGGGTTCGAAGCCGAAGTCCAAGACGAGGACGAAAGGGTCCAGTGACTTTAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGAGCGAGTTCTAATGGCGGTGGGAATGATACTTTGAGCTTCCGAATCGGGAATTTTAATAAGTATATGGAAAGTGAGCAAGTGGCGGCGGGATGGCCTGCTTGGCTCTGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGCTCTGATGCCTATGAAAAATTGGAGAAGATTGGACAAGGTACATATAGTACTGTATTCCGAGCACGTGAACTCGAGACAGGAAGGATAGTCGCTTTAAAGAAGGTCCGTTTCGATAATTTCGAGCCCGAAAGTGTTCGGTTTATGGCACGAGAGATCATGATTCTCCGCAGGCTTGATCACCCCAATATCATCAAATTGGAGGGCTTAATCACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGATCATGACATTACTGGACTCTTGTCTTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGTTACATGAAACAATTGTTATCCGGGCTCGAGCATTGTCACTCACGTGGCGTAATGCATCGAGATATTAAAGGGTCTAATCTTCTAGTCAATAACGAAGGGGTATTGAAGGTGGCTGATTTTGGTTTGGCAAACTTCTGTAATTCGGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACGCTATGGTATCGTCCTCCTGAACTTCTACTCGGCTCCACAGACTATAATGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTTGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAGCTTCCACATGCCACTTTGTTCAAACCACAACATCCTTACAATAATTGTTTACGGCAGACGTTCAAAGATTATCCTTCGACGACCGTGAACTTGTTAGAAACTCTTCTTTCTGTCGAACCATACAAGCGCGGAGTTGCATCCTCTGCTCTCACATCTGAGATACTAGAACCAAATAATCAGTGTTCTTTGTCTAATGCTATATCCTTTGTGGGTTCTTTCAGTATTTCAGTACAAAACCGCATGCATGTGATCCATCAAGCATGCCAATATATCCACCAAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCTAGAAGCTCGAGATTTGCATAAGATTAGTATTAATGCTCAAAATCTTAAAGAAGAGAAGGTTATCAAAGGTGGTGAGGTGAAAAAGGTTTTAAATGATAAATTGCAAGAGTCTATGCATGTAAAGAATGCATCCCAAGGAGACATTCCTTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGAAGCGTCTATTAGATCGCATTCGAGATCGATTTCACGAGGACACGTAATTAATGGGCTGGATCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTTGTCCATCAGCTGTTCAAGTTCGAAGGGACGTGAATCAAACGAGAGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGAGCGTCCCGATTCGTTTGATGCTTCGGATGAGTACCATTCGCAGGATTTTTCAGTGGCACTTTACTTGCAAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATACTCTGGGCCCTTGTTATCTCAATCGAGCCGAGTGGATGAACTCCTAGACAGACACGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGAATCATCCGTTCTCACACCTGTAGGTAAAAATTGA 2073 45.3 MGCVNTKHAVSVTPAFDHSGVFRDNESTAIGNSGRSRLGFGEIDKGSKPKSKTRTKGSSDFNGVASEFGESGRASSNGGGNDTLSFRIGNFNKYMESEQVAAGWPAWLCAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSTVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSEILEPNNQCSLSNAISFVGSFSISVQNRMHVIHQACQYIHQAKRLMQNKERSLEARDLHKISINAQNLKEEKVIKGGEVKKVLNDKLQESMHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDEASIRSHSRSISRGHVINGLDHSAILHSRSNVDSKFHEKGDMLSISCSSSKGRESNERSKVVIRNQWGKFERPDSFDASDEYHSQDFSVALYLQDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRESSVLTPVGKN 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9640923 9644756 + Cp4.1LG02g10550.1 Cpe02g01045 464994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01045 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Cpe02g01045 690 Gene3D Transferase(Phosphotransferase) domain 1 210 458 - -
Cpe02g01045 690 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Cpe02g01045 690 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Cpe02g01045 690 SUPERFAMILY Protein kinase-like (PK-like) 121 410 IPR011009 -
Cpe02g01045 690 MobiDBLite consensus disorder prediction 56 79 - -
Cpe02g01045 690 ProSiteProfiles Protein kinase domain profile. 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01045 690 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 55 678 - -
Cpe02g01045 690 CDD STKc_CDK9_like 127 409 - -
Cpe02g01045 690 PANTHER CELL DIVISION PROTEIN KINASE 55 678 - -
Cpe02g01045 690 Pfam Protein kinase domain 127 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01045 690 MobiDBLite consensus disorder prediction 41 55 - -
Cpe02g01045 690 SMART serkin_6 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01045 690 MobiDBLite consensus disorder prediction 23 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01045 Cpe-Chr2:9640923 Cpe03g01388 Cpe-Chr3:11172333 2.49E-177 dispersed
Cpe01g02414 Cpe-Chr1:20078333 Cpe02g01045 Cpe-Chr2:9640923 0 wgd
Cpe13g00969 Cpe-Chr13:8076437 Cpe02g01045 Cpe-Chr2:9640923 0 wgd
Cpe02g01045 Cpe-Chr2:9640923 Cpe20g00057 Cpe-Chr20:281924 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62228 PF00069 Pkinase 5.10E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01045 - - csv:101220347 1116.29