Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01046 ATGACACGTGAACAGCGCCTTTTGATGGCGCTGTTTAGAAAATTGTTCTGCCGGAAGCCTCCAGATCGGCTTCTAGAGATGTCGGAGAGAGTTTACGTGTTTGATTGTTGCTTCTCTACGGACGTCTTGGAAGAGGATGAATACAAAGTGTACTTTGCTAGCATTATACCAAAGCTGCAAGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTTAGTGAACGAAAGAGGAAGACTAGAACTTCAGATATATTGTCTCATTATGGTATGACAGTTATGGAGTATCCTCTGCAATATGAAGGGTGTCCACTACTGCCATTGGAGATGATCCACCACTTCATTCGGTCGAGTGAAAGCTGGTTGTCCTCTGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAACAAGGAGGATGGCCAATCCTTGCTTTCATGCTTTCAGGTCTCTTATTGTACCGCAAACAATATGAGGGGGAGCAAAAGACCCTTGAAATGGTCTACAGGCAAGCTCCTAGAGAACTTTTCCATGTTCTTTCTCAGATAAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAACCTAGGTTCTGATTGGCCTCCACCTGATTCACCTCTAATTTTAGAGTGTCTGATACTTCGGGACCTTCCGATGCTTGATGGAGGAAAAGGGTGCAGGCCTATCATACGCATTTACAGCCAGGACCCATTAACACCACGAAATAAAAGTCCAAAACTTGCTTTTTCTAGTGCAAAGATGAAAAAACATGGTTGCCAGTATCTACAGGCAGCAAGCGGACTGGTAAAACTGGACGTCCATTGTCATGTTCAAGGGGATGTTGTTCTTGAGTGCATCCATTTAGATGGTGATCTAATACGCGAGGAAGTGATATTTAGAGTCATGTTTCACACGGCGTTTGTGCATTCAAACAATTTGAAGCTCAATCGTGATGAGGTTGATATTATATGGGATGCCAAGGGGCAGTTTCCTAAAGATTTTGGAGTAGAGGTACTTTTTCTGGATGCTGATGATGCAGTGCCAAACGTCTCTCCTGTAACGAAAAGTGATGACAAAATTGAAATAGTAAGCAATTCGACTGAGGAGTTTTTTGAAGTGGAAGAAATATTTAGCAATATAGTTGACGTGCAGGAATACGATGTTCAAATGGTACATGCTAATGAAGTAGATGATATTGATCATCAAACAGTTTGGAAGGAAGATGCAGATCCTCCTACATTCCAACGCTGTAAATCTTTTGGAGGGAGTCGAAACTTGGACAAGAAGATCGATTGTAACGTTGAAGCAGTGAAGGACATCACTGTCGATGACGTGACTTTCAAGCGAGATGAAAAAATGGACTCTGGTCTTCATGTAGTGAAGGACATTGTTATGGATTATTCAGATAAAAAGCCAAATCCTCCGCTATTTTCTGTTAACGTACTGAGACGCATGGGAATCAAGGAACTGATAGACGATGTGTACAACAAGTTGGAAGAGGTTGAGCATCAAGGGTATCTAGAAGATACTGCTATTCCAGACTTCGAATCGAAGGTTCCTGCGAAAAAGTTGGATTCTGATGCGTGGAGGCTTAAATATGAGAAGTTGCAGCCACTAGCATCTAGGAAACAGCCTTCGTCAACAGCTAAGCTATTAAATAATACAACCTTAGCTAAACAGAAGACCAAACAACCAGAAGATCAGGGCTCTCTTATACAGGAAAAACCAAAAACTCTTTCTAGATGGACTCCACATGACAAAGAATCTTACATAAACTCCATGCATGTGTTTTATCCATCATCATGGCATACTGGTGCCTCAGCAACATGTATTAGTTCTCCTACTAGAGATTCTTATTCATATTCAACTTCAAAACCTGCTTCTATTACTTTAGGACTGCTGCTGTCAACTGATACAGCAGATGAACAAAACTGTAACATGGTGAGTCCTAGAAGGCCTTTATGTTGTTCTGCAACAGAGACTCCCACGAGTAAACCACAATCCCCACTTAGCTCCCCAAACCAATTACCAAATGCTATTCTGCATCAAGATCCTACTCTACGGTCACCAGCTCTTCATGCTAACACGTCTTTCTTGCATACATCATCTCCTAAATCTTCTTTGCCACCCTCTTCATATATTCACATAAATGCTAGATCTCCACCACCTCCACCACCACCACCACCACCACCACCACCACTACCTCCTCCACCTTCCAGTCACGTGGCCTCTAAAAGTTCAGCGTTGGTGCGTGGAAATGCACCTAAGCATAGAGCTCCACCAGTACCACCTCCACCTCCTGTACGTAAAGCTCAACCACAATTACCTCCCCCACAGCCACCCCGTTCACCTGGAGCTTTGCTTCCTCCACGCCTATCTAATGCTGGAGCTTTTCCACCACCCCCTCCCCCACCTCCTCCAATTCAGAAAGCTCCTCCACATTTAATCCAAGGGCGACAGGCTTTAAAATCTCCAACAACCTGTGTGGTGTCATCATCATTGCCGTCTCCAATTTCTAATGCGCCATCACCTCCTCCACCTACGACAGGTCCCCTTCCACTGGTTCCTTCTCCTTCCAGACCTTCAGGAGGTATGTCTCCACACCCGGTAGCTAAAGGAGTAAATTCTTCAACTGATGTGAAAACATCATCTGTTGTGAGGGGACGTGGGTTCTCGCGGTCAATGGGCATGGGGGTGGCTGCTATAGGACCTCAACGATCATCATTAAAACCTCTGCATTGGAGCAAGGTGACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATTTGGAGATCCTGAAAGTGCACCAGAATTTGATGTAGCTGAGCTGGAGACACTTTTCTCTGTGACTGTCCCTAAACCTATTGTTGATTCAGGAGGTAAATCTGGAGGACGAAGGAAGTCAGTTGGATCAAAACTGGACAAAGTTCACTTGATTGATCTTAGGCGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGAATGCCACTGTCTGACATGATGGCAGCAGTACTCTCCATGGATGAATCCATATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATGGAACTTCTCAAGGGATACTGTGGTGACAAGGAAAAACTCGGAAAGTGCGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTGGAGTCGAAGTTAAGAGTGTTCTCTTTTAAGATTCACTTCAGCTCTCAGATAATAGAGTTCAGAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAACTCTTGCAAATTGAAGGAAATATTGAAGAGAATTCTTTGCCTGGGAAATATGCTGAACCAAGGAACTGCTAGGGGTTCTGCCATTGGATTCAGGTTGGATAGTCTCTCGAAACTCACTGATACACGTGCTACTAACAATAAGATGACTCTCATGCATTATCTCTGTAAGGTCCTTGCTTCGAAGTCACCGTCGCTTCTTGATTTTCATCTGGACCTTAGTAGCTTGGAAGCCGCATCTAAGATACAATTGAAGTCCTTGGCAGAAGAAATGCAAGCAATAACAAAAGGATTGGAAAAGGTGAAGCAAGAACTAGTTGCATCTGAAAGCGACGGCCCCATCTCCGAAGCTTTTCGTAAGACATTGAAAGGATTTGTTACTCTTGCCGAGAAGGAGGTGGAATCTGTGACCGTTCTTTACTCGGGGACGGGTAGAAATGCGGACGCACTTACACAATATTTTGGCGAGGATCCTGCCCGTTGTCCATTTGAACAAGAATCTGAGTTACTTAGATCCATTGGAAGGATCAGGCCCTTTGGAGTCATAGCCTTCTTGAAAGAGTTCATAGGTTCTGTCCCTGAAGATGATGTATAG 3900 43.56 MTREQRLLMALFRKLFCRKPPDRLLEMSERVYVFDCCFSTDVLEEDEYKVYFASIIPKLQDHFPDASFMVFNFSERKRKTRTSDILSHYGMTVMEYPLQYEGCPLLPLEMIHHFIRSSESWLSSERQKNVLLMNCEQGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFHVLSQINSQPSQMRYLQYISRRNLGSDWPPPDSPLILECLILRDLPMLDGGKGCRPIIRIYSQDPLTPRNKSPKLAFSSAKMKKHGCQYLQAASGLVKLDVHCHVQGDVVLECIHLDGDLIREEVIFRVMFHTAFVHSNNLKLNRDEVDIIWDAKGQFPKDFGVEVLFLDADDAVPNVSPVTKSDDKIEIVSNSTEEFFEVEEIFSNIVDVQEYDVQMVHANEVDDIDHQTVWKEDADPPTFQRCKSFGGSRNLDKKIDCNVEAVKDITVDDVTFKRDEKMDSGLHVVKDIVMDYSDKKPNPPLFSVNVLRRMGIKELIDDVYNKLEEVEHQGYLEDTAIPDFESKVPAKKLDSDAWRLKYEKLQPLASRKQPSSTAKLLNNTTLAKQKTKQPEDQGSLIQEKPKTLSRWTPHDKESYINSMHVFYPSSWHTGASATCISSPTRDSYSYSTSKPASITLGLLLSTDTADEQNCNMVSPRRPLCCSATETPTSKPQSPLSSPNQLPNAILHQDPTLRSPALHANTSFLHTSSPKSSLPPSSYIHINARSPPPPPPPPPPPPPLPPPPSSHVASKSSALVRGNAPKHRAPPVPPPPPVRKAQPQLPPPQPPRSPGALLPPRLSNAGAFPPPPPPPPPIQKAPPHLIQGRQALKSPTTCVVSSSLPSPISNAPSPPPPTTGPLPLVPSPSRPSGGMSPHPVAKGVNSSTDVKTSSVVRGRGFSRSMGMGVAAIGPQRSSLKPLHWSKVTRVLQGSLWEELQRFGDPESAPEFDVAELETLFSVTVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESILDVDQVENLIKFCPTKEEMELLKGYCGDKEKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIIEFRKSLNTVNSVCQEVKNSCKLKEILKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRATNNKMTLMHYLCKVLASKSPSLLDFHLDLSSLEAASKIQLKSLAEEMQAITKGLEKVKQELVASESDGPISEAFRKTLKGFVTLAEKEVESVTVLYSGTGRNADALTQYFGEDPARCPFEQESELLRSIGRIRPFGVIAFLKEFIGSVPEDDV 1299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9648943 9657418 + Cp4.1LG02g10560.1 Cpe02g01046 464995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 701 718 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 544 576 - -
Cpe02g01046 1299 PANTHER FORMIN-J 748 1261 - -
Cpe02g01046 1299 PANTHER FORMIN-J 9 771 - -
Cpe02g01046 1299 SMART PTEN_C2_2 206 346 IPR014020 -
Cpe02g01046 1299 Pfam C2 domain of PTEN tumour-suppressor protein 207 344 IPR014020 -
Cpe02g01046 1299 SUPERFAMILY Formin homology 2 domain (FH2 domain) 803 1267 - -
Cpe02g01046 1299 SMART it6_source 903 1297 IPR015425 -
Cpe02g01046 1299 ProSiteProfiles Formin homology-2 (FH2) domain profile. 903 1299 IPR015425 -
Cpe02g01046 1299 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 208 344 IPR035892 -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 720 744 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 701 893 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 875 893 - -
Cpe02g01046 1299 Coils Coil 1186 1206 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 842 867 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 798 816 - -
Cpe02g01046 1299 ProSiteProfiles C2 tensin-type domain profile. 208 347 IPR014020 -
Cpe02g01046 1299 Gene3D Protein tyrosine phosphatase superfamily 23 211 IPR029021 -
Cpe02g01046 1299 Gene3D - 212 344 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 824 841 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 660 685 - -
Cpe02g01046 1299 MobiDBLite consensus disorder prediction 761 791 - -
Cpe02g01046 1299 Pfam Formin Homology 2 Domain 909 1270 IPR015425 -
Cpe02g01046 1299 Gene3D Formin, FH2 domain 906 1294 IPR042201 -
Cpe02g01046 1299 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 25 196 IPR029021 -
Cpe02g01046 1299 PRINTS Proline rich extensin signature 759 784 - -
Cpe02g01046 1299 PRINTS Proline rich extensin signature 661 682 - -
Cpe02g01046 1299 PRINTS Proline rich extensin signature 618 630 - -
Cpe02g01046 1299 PRINTS Proline rich extensin signature 724 741 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01046 Cpe-Chr2:9648943 Cpe20g00055 Cpe-Chr20:268773 0 dispersed
Cpe18g00780 Cpe-Chr18:7393833 Cpe02g01046 Cpe-Chr2:9648943 0 wgd
Cpe02g01046 Cpe-Chr2:9648943 Cpe04g01480 Cpe-Chr4:11754724 2.44E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01046 - - bhj:120083459 1899.79