Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01055 ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTATTCCGGCCAAGCGCGTCAAGATCAAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTCAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGTTTACCTTGATGGCAGTCTTCCAGGTGACAATGGTTTTGATCCTCTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGGCGATGGGCAATGCTTGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCTGGGAAAGCCGAGTATTTTGCATCGTCGTCGACTCTCTTTGTGATCGAGTTCATTCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGGTATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTAGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGATCCATGGCACAACACTATTGTCCAAACACTAAGGGGATAG 756 45.63 MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSSVPSSFKVEAKKGEWLPGLPSPVYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9696111 9700108 + Cp4.1LG02g10380.1 Cpe02g01055 465004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01055 251 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 251 IPR001344 GO:0009765|GO:0016020
Cpe02g01055 251 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Cpe02g01055 251 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Cpe02g01055 251 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 251 - -
Cpe02g01055 251 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01055 Cpe-Chr2:9696111 Cpe09g00591 Cpe-Chr9:4104797 2.82E-66 dispersed
Cpe18g00788 Cpe-Chr18:7444269 Cpe02g01055 Cpe-Chr2:9696111 1.70E-166 wgd
Cpe02g01055 Cpe-Chr2:9696111 Cpe04g01495 Cpe-Chr4:11844811 1.59E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01055 K08910 - csv:101218675 476.478