Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01080 | ATGGGGAGGAAGAAGAGAACTGAAGGTGGTGGTGAGAGATCAGAGTCTCAGGACGTTGGTGGCCGTGGCTCCCAAGGATTTGCTGAAAGGAGAGACTTCCCGCAGCAACATAGTGGCAATGCATACCAGGGTGGGGGGAGAGGCTGGGCTTCTCAAGGGGGACGTGGAGGTCAAGGTGGTGGTCGTGGCCGAGGGACGTCTCAACATCAGCACTATGGAGGACCTCCTGAATACCAAGGAAGGGGTAGAGGTGGGCAATATCAGCATGGAGGACGCAGTAACTATGGTGGTGGTAATCGCGGTGGCATGGGTAGTGGTGGCATTGGGGGAGGACCTTCTTCTGGTGGCCCATCCAGGCCATCAGTTCCCGAGCTGCACCAAGCAACCCCAGTGTATCAAGGTGGGGTGACTCAGCCAATCTCATCTGTGGCGAGTTCTTCCTCCCACCCACCTGATACCTCATTGTTAGAACAACAATTTCAGCAGATTTCCATTCAGCAGGAATCTGCTCAAAGCCAAGCAATTCAACCTGCACCCCCGTCTAGTAAATCTATGAGATTCCCTCTGAGACCAGGAAAGGGTAGCACTGGCACAAGGTGTATTGTCAAGGCTAACCACTTCTTTGCGGAGCTTCCAGATAAAGATCTTCATCAGTATGATGTTACTATTACGCCAGAAGTCACTTCGCGTGTCTATAGCCGAGCTGTAATGGAGCAGCTGGTGAAGTTATACAAGGTCTCTCACCTTGGAGATCGTCTTCCTGCCTATGATGGAAGAAAAAGTTTATACACTGCCGGTCCTCTTCCTTTCATATCAAATGAGTTTAGAATAACTCTTTTTGACGAGGAAGATGGATCAGGAGGACAAAGGCGGGAGAAAGAATTTAAAGTCGTAATCAAATTTGCTGCTCGTGCTGATCTACACCATTTAGGACTCTTTCTTCAAGGCAGACAGGCTGATGCCCCTCAGGAAGCCCTTCAAGTTCTGGATATTGTTTTACGCGAATTGCCTACTTCAAGGCATGACTATTACTCTACACCTTTGTCACTGGATATTTGGTATTCCCCTGTGGGCCGATCATTTTACTCTCCAAACCTTGGTAGACGTCAGACACTGGGTGAGGGGCTGGAAAGCTGGCGTGGCTTTTATCAGAGTATCCGTCCTACTCAAATGGGGCTCTCTCTAAATATTGATATGTCATCTACTGCTTTCATAGAGCCTTTGCCTGTTATCGACTTTGTGACTCAGCTTCTCAACCGCGATATGTCATCCAGACCACTTTCTGATGCTGACCGTGTTAAGATAAAGAAGGCTCTTCGAGGTGTCAAGGTTGAAGTGACACACCGTGGGAATATGCGCAGAAAATATCGCATTTCTGGGTTGACATCACAAGCAACGCGGGAGCTAACTTTCCCGGTTGATGAAAGAGGTACTATGAAATCGGTGGTGGAGTACTTTTATGAAACGTATGGGTTTGTTATTCAACATACTCAGTGGCCTTGTCTTCAAGTAGGGAACCAGCAGAGACCTAACTATCTACCGATGGAAGTATGTAAGATTGTTGAAGGACAGAGGTATTCCAAACGGCTCAACGAGAGACAGATAACTGCTCTGCTCAAGGTTACATGCCAACGACCACACGATAGAGAGGCTGACATAATGCAGACAGTACGTCATAATGCATATCATAATGATCCATATGCAAAGGAGTTTGGAATTAAGATAAGTGAGAAGCTTGCTTCTGTTGAAGCTCGTATTCTTCCTCCACCATGGCTAAAATATCATGACACAGGCAGAGAAAAAAATTGTTTGCCACAAGTTGGACAGTGGAACATGATGAATAAGAAAATGTTCAATGGTGGTACTGTAAACAACTGGATGTGTGTAAATTTCTCTCGCTCTGTGCAAGAGAGTGTCACTAGCAGGTTTTGTTATGAACTGGCTCAAATGTGTTACATTTCTGGCATGGCTTTCAATCCAGAACCAGTGCTTCCTCCTATTTTTGCCCGTCCTGATCACGTGGAAAAGGCCCTTAAAACTCGGTATCATGATGCAATGAGCATTCTCCGACCCCAGGGCAAGGAACTTGATCTGCTTATTGTTGTTTTGCCAGATAACAACGGATCTCTCTATGGTGATTTAAAACGTATCTGTGAAACAGATCTTGGGCTTGTTTCCCAGTGCTGTTTGACTAAACATGTCTTTAAAATGAGTAAACAATATTTGGCCAACGTGGCCTTAAAAATAAATGTTAAGGTTGGGGGAAGGAATACAGTACTCGTTGATGCATTATCTAGGAACATACCCTTGGTTAGTGACCGGCCGACCATTATATTTGGTGCTGACGTAACCCATCCTCACCCAGGGGAAGACTCAAGTCCATCCATTGCTGCTGTTGTGGCTTCTCAAGATTGGCCGGAAGTTACAAAATATGCTGGTTTGGTCAGTGCTCAAGCCCATAGGCAAGAGCTTATTCAAGATCTTTTCAAAACATGGCAGGATCCTGTGAGGGGGACAGTGACGGGTGGAATGATCAAGGAACTCCTCATCTCCTTCCGTAGAGCAACTGGACAGAAACCTCAACGCATCATATTCTACCGGGATGGTGTTAGTGAAGGACAATTCTACCAAGTTTTGTTACATGAGCTGGATGCCATTAGAAAGGCTTGTGCTTCTTTGGAACCAAACTACCAACCTCCAGTGACTTTCGTCGTGGTGCAGAAGCGTCATCACACTAGGTTGTTTGCTAATAACCATTCTGATCGCCATGCAGTCGACAAGAGTACGGTTGTTGACTCCAAAATTTGTCATCCTACGGAATTTGACTTCTACCTGTGCAGCCATGCTGGAATCCAGGGTACAAGTCGTCCTGCTCATTACCATGTTCTGTGGGATGAAAATAAGTTCACAGCTGACGGATTGCAGACTCTAACGAATAACCTTTGTTATACGTATGCAAGGTGTACTCGCTCTGTTTCCATTGTTCCCCCAGCGTACTATGCTCATCTCGCTGCATTCCGAGCTCGCTTTTATATGGAACCTGAAACCTCTGATATTGGATCAATTAGCAGTGATGCTGCTGCTGGACGTGGTGGCGTTAGTGGCGCTCGCAGTACACGGTCTCCAAGTATGAATGCTGCTGTTCGACCTTTGCCAGCTCTCAAAGAGAATGTTAAGAGGGTTATGTTCTATTGTTGA | 3198 | 46.31 | MGRKKRTEGGGERSESQDVGGRGSQGFAERRDFPQQHSGNAYQGGGRGWASQGGRGGQGGGRGRGTSQHQHYGGPPEYQGRGRGGQYQHGGRSNYGGGNRGGMGSGGIGGGPSSGGPSRPSVPELHQATPVYQGGVTQPISSVASSSSHPPDTSLLEQQFQQISIQQESAQSQAIQPAPPSSKSMRFPLRPGKGSTGTRCIVKANHFFAELPDKDLHQYDVTITPEVTSRVYSRAVMEQLVKLYKVSHLGDRLPAYDGRKSLYTAGPLPFISNEFRITLFDEEDGSGGQRREKEFKVVIKFAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTSRHDYYSTPLSLDIWYSPVGRSFYSPNLGRRQTLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDMSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPHDREADIMQTVRHNAYHNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGREKNCLPQVGQWNMMNKKMFNGGTVNNWMCVNFSRSVQESVTSRFCYELAQMCYISGMAFNPEPVLPPIFARPDHVEKALKTRYHDAMSILRPQGKELDLLIVVLPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRNIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKTWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHSDRHAVDKSTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDIGSISSDAAAGRGGVSGARSTRSPSMNAAVRPLPALKENVKRVMFYC | 1065 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9916388 | 9923990 | + | Cp4.1LG02g10120.1 | Cpe02g01080 | 465029 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01080 | 1065 | SMART | Piwi_a_2 | 698 | 1013 | IPR003165 | GO:0003676 | |
Cpe02g01080 | 1065 | MobiDBLite | consensus disorder prediction | 164 | 180 | - | - | |
Cpe02g01080 | 1065 | SMART | PAZ_2_a_3 | 412 | 544 | IPR003100 | GO:0005515 | |
Cpe02g01080 | 1065 | MobiDBLite | consensus disorder prediction | 164 | 195 | - | - | |
Cpe02g01080 | 1065 | SUPERFAMILY | PAZ domain | 402 | 562 | IPR036085 | GO:0005515 | |
Cpe02g01080 | 1065 | Pfam | PAZ domain | 413 | 537 | IPR003100 | GO:0005515 | |
Cpe02g01080 | 1065 | Pfam | Argonaute linker 2 domain | 548 | 594 | IPR032472 | - | |
Cpe02g01080 | 1065 | Gene3D | - | 586 | 761 | - | - | |
Cpe02g01080 | 1065 | ProSiteProfiles | PAZ domain profile. | 408 | 522 | IPR003100 | GO:0005515 | |
Cpe02g01080 | 1065 | Pfam | Argonaute linker 1 domain | 356 | 406 | IPR014811 | - | |
Cpe02g01080 | 1065 | ProSiteProfiles | Piwi domain profile. | 698 | 1013 | IPR003165 | GO:0003676 | |
Cpe02g01080 | 1065 | MobiDBLite | consensus disorder prediction | 1 | 125 | - | - | |
Cpe02g01080 | 1065 | Pfam | N-terminal domain of argonaute | 199 | 333 | IPR032474 | - | |
Cpe02g01080 | 1065 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cpe02g01080 | 1065 | Pfam | Mid domain of argonaute | 605 | 679 | IPR032473 | - | |
Cpe02g01080 | 1065 | PANTHER | PROTEIN ARGONAUTE 1A | 87 | 1064 | - | - | |
Cpe02g01080 | 1065 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 87 | 1064 | - | - | |
Cpe02g01080 | 1065 | Pfam | Piwi domain | 699 | 1012 | IPR003165 | GO:0003676 | |
Cpe02g01080 | 1065 | Pfam | Glycine-rich region of argonaut | 73 | 180 | IPR024357 | - | |
Cpe02g01080 | 1065 | CDD | PAZ_argonaute_like | 407 | 521 | - | - | |
Cpe02g01080 | 1065 | CDD | Piwi_ago-like | 566 | 1012 | IPR045246 | - | |
Cpe02g01080 | 1065 | MobiDBLite | consensus disorder prediction | 1022 | 1044 | - | - | |
Cpe02g01080 | 1065 | SMART | DUF1785_2 | 355 | 407 | IPR014811 | - | |
Cpe02g01080 | 1065 | Gene3D | - | 767 | 1065 | IPR036397 | GO:0003676 | |
Cpe02g01080 | 1065 | Gene3D | paz domain | 401 | 526 | - | - | |
Cpe02g01080 | 1065 | SUPERFAMILY | Ribonuclease H-like | 693 | 1013 | IPR012337 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01488 | Cpe-Chr1:8885268 | Cpe02g01080 | Cpe-Chr2:9916388 | 0 | dispersed | |
Cpe02g01080 | Cpe-Chr2:9916388 | Cpe03g01473 | Cpe-Chr3:11678135 | 0 | dispersed | |
Cpe02g01080 | Cpe-Chr2:9916388 | Cpe20g00042 | Cpe-Chr20:188486 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01080 | K11593 | - | csv:101212130 | 1812.73 |