Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01093 ATGGTTTTGACAACAGTAGCAGACTCCGGCGATTCTGTGAACTGCACTTTTGGCTCCAGATATGTCCGCTCTCCGCCGCCGAAGTTCAATATGGGGGAGAAATCGATACCCAAAGATGCAGCGTACCAGATCATACACGATGAGTTGATGCTTGATGGGATACCCAGGTTGAACTTGGCCTCCTTTGTTACCACATGGATGGAGCCTGAATGTGATAACCTGATCATGGCTTCTCTCAACAAGAACTATGTGGACATGGATGAGTACCCTGTCACCACTGAGCTACAGAACAAAAGAAGATCTCAAGGCAAGCCCTGTAATAACCCCAACATAGTCACTGGAGCTAATGTGCAGGTGTGTTGGGAGAAGTTTGCTAGGTACTTTGAGGTTGAGCTGAAGGAGGTGAAGCTTTCTGAAGGGTTTTATGTTATGGATCCTATGAAGGCTGTTGAACTTGTGGATGAGAACACCATTTGTGTTGCAGCCATTTTGGGATCCACTTTGACAGGAGAGTTTGAGGATGTAAAACTCCTTAATGAACTGCTCTCTAAGAAGAATAAGGAAACGGGTTGGGATACCCCAATTCACGTCGATGCAGCCAGCGGCGGGTTCATAGCTCCGTTCCTTTATCCCGATCTCGAGTGGGATTTTCGGTTGCCTTTAGTGAAGAGTATCAATGTCAGTGGCCATAAGTATGGGCTTGTTTATCCTGGTGTTGGATGGGTTGTTTGGAGGAGTAAAGAGGATCTTCCTGATGAGCTTGTGTTCCATATTAACTATCTTGGTTCTGATCAACCCACCTTCACTCTTAACTTCTCTAAAGGTTCTAGCCAAATCATTGCTCAGTATTATCAGTTCATACGGCTCGGTTTCGAGGGATACAAAAACGTGATGGAGAACTGCAAGGAGAATGCAAGAGTGTTGAAAGAAGGAATAGAGAAGATGGGAAGGTTTGAGGTAGTTTCCAAGGATGTTGGAGTACCCCTAGTTGCCTTCACTCTCAAAGACAGCAGCAAGCACACCGTGTTCGAGATATCCGAGAACCTAAGGAGGTTTGGATGGATCGTGCCAGCTTACACGATGCCACCGGATGCTCAGCACATCGCCGTGCTACGTGTCGTGATCAGGGAGGACTTCAGCCGGAGTTTGGCAGAGAGATTGATCTCGGACATCGATAAAGTCCTGAAGGAAGTCGACGCGCTGCCGGTTCGGGTGGCTGTGAAAGCAGCAGCAGAAGAAGATGGTGAGAGAATTATAAAGCATGTGAAGAAGAGTGATAAGGAGATTGAAGGAGAAATAGCTGCATATTGGAAGAGGCTTGTGGATGGCAAGAGAACTGGTGCCTGCTAG 1350 47.04 MVLTTVADSGDSVNCTFGSRYVRSPPPKFNMGEKSIPKDAAYQIIHDELMLDGIPRLNLASFVTTWMEPECDNLIMASLNKNYVDMDEYPVTTELQNKRRSQGKPCNNPNIVTGANVQVCWEKFARYFEVELKEVKLSEGFYVMDPMKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLSKKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCKENARVLKEGIEKMGRFEVVSKDVGVPLVAFTLKDSSKHTVFEISENLRRFGWIVPAYTMPPDAQHIAVLRVVIREDFSRSLAERLISDIDKVLKEVDALPVRVAVKAAAEEDGERIIKHVKKSDKEIEGEIAAYWKRLVDGKRTGAC 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10013672 10016803 + Cp4.1LG02g09960.1 Cpe02g01093 465042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01093 449 Gene3D - 65 314 IPR015421 GO:0003824
Cpe02g01093 449 Gene3D - 315 402 - -
Cpe02g01093 449 PANTHER GLUTAMATE DECARBOXYLASE 1 98 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cpe02g01093 449 PANTHER GLUTAMATE DECARBOXYLASE 96 449 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cpe02g01093 449 PANTHER GLUTAMATE DECARBOXYLASE 96 449 - -
Cpe02g01093 449 Gene3D - 1 64 - -
Cpe02g01093 449 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 97 398 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cpe02g01093 449 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 335 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cpe02g01093 449 Pfam Pyridoxal-dependent decarboxylase conserved domain 37 97 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cpe02g01093 449 PANTHER GLUTAMATE DECARBOXYLASE 1 98 - -
Cpe02g01093 449 SUPERFAMILY PLP-dependent transferases 15 398 IPR015424 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01093 Cpe-Chr2:10013672 Cpe13g00440 Cpe-Chr13:4739919 0 dispersed
Cpe02g01093 Cpe-Chr2:10013672 Cpe13g00539 Cpe-Chr13:5469153 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01093 K01580 - csv:101210903 818.92