Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01099 | ATGATAGCCAGCGCCACCACTTCATCCGACCCTTTTTCTTCCTTGGAAAATGGCACCAAGAGAAAGCGAAGGCCTGCAGGGACACCAGATCCGGACGCAGAGGTTGTGTCTCTGTCGCCCAAGACGTTGCTCGAATCGGACCGATACGTGTGCGAGATCTGCAACCAGGGGTTCCAGCGGGACCAGAACCTCCAGATGCATAGGCGCCGCCATAAGGTGCCATGGAAGCTGTTGAAGAGGGAGAGTCCTGTTGTGAGGAAGAGGGTTTTTGTTTGTCCTGAGCCTACCTGCCTGCACCATGACCCTTGTCATGCGCTTGGTGACCTTGTTGGTATCAAGAAGCACTTCCGACGGAAGCATAGCAACCATAAGCAATGGGTTTGTCAAAAATGCTCCAAGGGCTATGCTGTTCAGTCTGATTATAAAGCTCATCTCAAAACTTGTGGCACTCGTGGCCACTCTTGTGATTGCGGCCGCGTTTTCTCTAGGGTGGAGAGCTTTATAGAGCATCAAGATGCTTGCAATATGGGACATCTCCAGCAGCAATCCCAAACCCTCCAGCCGGCTGCATGTTTGTCCCAAACGGCATCGAGTCCAAGCCCATCCAGCGACACCAACATCAGCAGCGCACCCAATTGGGCAGCTCTCATAGCGCCACCCATTTCAAAGCCTCCGGACGCCAACAACAATGGATCACCACACGATCACAATCTAGACCTCAAACTCTCAACTGGGTCGAATTCGAATCCGAATCCGAATCTGAATCCGAATCTTGTAGAGGGAAACAAAGGCTGTTCTTCAATCAAACTCCAGCTCTCGATTGGATCGTGCGAGTTCATGGACGGTGCAAGAGATGTTAGAGACGAAGCCGGGCAGACACTAAGAGTTGCATTGGCGGAGAAGGCGTACGCGGAGGAAGCTAGACAGCAAGCCAAGCGGCAAGTAGAAATAGCGGAGCAAGAATTCGCAAATGCCAAAAGAATGAGACAACAAGCACAAGCGGAGCTCGATAAAGCTATAACGCTTAAACAAACCGTAATCAAACGGGTCAATTCAACTATTCTTGAAATCACTTGTCAAGCTTGCCAGAAGCAATTTCAAGCGAAAACAACAACAACTACAACAACAACAGCTGCATCGACTACTACTACAACAACGGCATCGTGCCGATCGTGA | 1176 | 50.34 | MIASATTSSDPFSSLENGTKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCQKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNPNPNLNPNLVEGNKGCSSIKLQLSIGSCEFMDGARDVRDEAGQTLRVALAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAITLKQTVIKRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTASCRS | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10053745 | 10056319 | + | Cp4.1LG02g09930.1 | Cpe02g01099 | 465048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01099 | 391 | SMART | c2h2final6 | 126 | 153 | IPR013087 | - | |
Cpe02g01099 | 391 | SMART | c2h2final6 | 90 | 120 | IPR013087 | - | |
Cpe02g01099 | 391 | SMART | c2h2final6 | 49 | 71 | IPR013087 | - | |
Cpe02g01099 | 391 | MobiDBLite | consensus disorder prediction | 190 | 209 | - | - | |
Cpe02g01099 | 391 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cpe02g01099 | 391 | MobiDBLite | consensus disorder prediction | 217 | 260 | - | - | |
Cpe02g01099 | 391 | SUPERFAMILY | beta-beta-alpha zinc fingers | 46 | 72 | IPR036236 | - | |
Cpe02g01099 | 391 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 51 | 71 | IPR013087 | - | |
Cpe02g01099 | 391 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 16-LIKE | 1 | 387 | - | - | |
Cpe02g01099 | 391 | MobiDBLite | consensus disorder prediction | 225 | 260 | - | - | |
Cpe02g01099 | 391 | Coils | Coil | 294 | 342 | - | - | |
Cpe02g01099 | 391 | Gene3D | Classic Zinc Finger | 27 | 89 | - | - | |
Cpe02g01099 | 391 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cpe02g01099 | 391 | PANTHER | OS03G0310200 PROTEIN | 1 | 387 | IPR039288 | GO:0009630 | |
Cpe02g01099 | 391 | Gene3D | Classic Zinc Finger | 111 | 190 | - | - | |
Cpe02g01099 | 391 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 49 | 71 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01865 | Cpe-Chr1:15978666 | Cpe02g01099 | Cpe-Chr2:10053745 | 4.82E-136 | dispersed | |
Cpe02g01099 | Cpe-Chr2:10053745 | Cpe20g00169 | Cpe-Chr20:959200 | 4.27E-159 | dispersed | |
Cpe02g01099 | Cpe-Chr2:10053745 | Cpe20g00005 | Cpe-Chr20:40531 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49063 | None | None | None | None | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01099 | K25871 | - | csv:101209426 | 557.755 |