Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01104 TCTTCTTATGATTGCGAAAATCCAAAAGAGTCTGAATCTCCACGCTTTCAAGCTATACTTCGAGTCACAAGTGCTCCTCGAAGGAAGTATCCTGCGGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGTGTACGACCTTTCCCACTCTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGGAAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGATTTGGCCATTTTTGCTGCTGATCTGGTTGGAATTCTTGAAAAAAATGTTGATACTCATCCAGAGTGGCAAGAGACCATTGAAGACTTGTTGGTTTTAGCTCGAAGCTGTGCCATGTCATCTCCTGGTGAATTTTGGCTTCAGTGTGAAGGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCAGGCATGCTGAAACAACTTCATACTCGAATGCTGTTCATTCTCACTAGATGTACCAGGCTACTACAGTTCCATAAAGAAAGTGGCTTAGCAGAAGATGAAAATGTTTTTCAGCTTCGTCAATCACGAAATCTGCATTCTGCCGATAAACGTATTCCTCCAGCTATGGGAAGGGAAATGAAAAGTTCTAATGCAGCCAAGGCTTCTAAGGCAGCTTCATCCAGGAAATCTTACAGCCAGGAGCAGCATGGCTTGAACTGGAGCAGAGAACACGACATGCTGCCTAGGAATAATGTCTCTGCATCTTCTGATGATACTTCAAAGAAGTTGGAATCTCCTACTGGCAGAGACCGGATGGCTTCTTGGAAAAAATTGCCTTCTCCGGCAGCCAAAAGTGTGAAAGAACCTACTTTGAAGGATAAAGGTGATAATAAGAGTTTTAAATCTTTGAATGTGCCAAAAATCAGGACTGATGTTTCTGAAACTGTTTTTGCTGCTGCAAATGAGCTTCCTCTGCCAAGAGATTCTCATGACCAGCCTCCCAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCATCTGTATCTGATGAGAGTTCAATCATTTGTCGCATTTGCGAAGAAGAGATTCCTACTGCAAATGTGGAAGACCATTCAAGAATTTGTGCAGTTGCTGATCGATGTGATCAAAAGGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTCTAGAGAAGATGATCGAGTCCTTTTCGCAAAAAGATTCTCAACATGTAGGAAGTCCAGATGTTGCAAAAGTTTCAAATTCTAGTATGACTGAAGAATCTGATATTTCCCCGAAACATAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTCGATTGCTTCCATGAAACTGAAAATTCTGTTTTCATGGATGACTTGAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCTGCTGGTAGCATGACTCCTAGATCTCCTTTATTAACACCAAGAACCAGTCCGTTTGACTTGTTTTTGGCCGGGAAAGGAGCTTACTATGAACACGATGATCTTACACAGATCAGTGATCTTGCAGATATTGCACGCTGTTCAGCAAATGCACCTCTGGGTGATGATTGCTCGATGCAATATCTGTTGACGTGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCACTGACAGTTGAAACTTTTGGCACTCGCATTGAGAAGTTAATACGGGAGAAGTATTTGCAGCTTTGTGAGCTGGTGGGTGATGAAAAGATTGACATAGCGAGCACTGTTATTGATGAAGATACTCCTCTAGATGATGACGTTGTTCGTAGCTTAAGAACAAGTCCCATCCATTCTTCAAAGGACCGTACATCAATTGATGACTTTGAGATTATAAAACCTATCAGCCGTGGGGCATTTGGCCGGGTTTTGAAGAAAGCTGATATGATTCGAAAAAATGCTGTTGAAAGTATTCTGGCAGAACGTGATATTTTAATATCTGTGCGCAACCCTTTTGTGGTTCGCTTCTTCTACTCCTTTACTTGTCGTGAAAATTTATATCTCGTGATGGAGTATTTGAATGGAGGAGATCTTTACTCCTTGTTGAGAAATTTAGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATTGCAGAAGTGGTTCTTGCTTTGGAGTATTTGCATTCACTCGGGGTAGTTCATCGTGACTTAAAGCCAGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAAGTTGGTCTTATCAACAGTACTGATGATTTGTCTGGACCAGTTGTTAGCGGTATCACTCTTCATGGGTATGATGAGCCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGAAAGAAGCGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTGGGAACTGGACATGGTGCCACAGCTGATTGGTGGTCTGTCGGGATCATTTTATTTGAGCTAATTGTTGGAATTCCACCCTTTAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAACCGTAAGATCCCGTGGCCTCAAATACCTGAAGAGATGAGCCACGATGCTCAAGATTTAATTGATCGATTATTGACTGAAGATCCTCACCAGCGACTTGGAGCTATAGGCGCACATGAGGTGAAGCAGCATATGTTCTTTAAAGATATTAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTACTTTACAAGTCGCTACTCATGGAATCATTCAGATGATCATGGCTATCCACCCAGTGAACTTGAGGATTCAAGTGATGCTGATAGCTTAAGTGGTAACAGTAGTGTGAGCAATCGTCAAGATGAAGTGGTTGATGAATGTGGGGGCCTTACAGATTTTGAGCCTGGTTCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTTGCATCCATCAACTATGACCTGCTTTCTAAGGGTTTGAAGGATGATCCTCCTGATCACGATGCATAA 3069 41.77 SSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRGKFDKAKEEVNSDLAIFAADLVGILEKNVDTHPEWQETIEDLLVLARSCAMSSPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIPPAMGREMKSSNAAKASKAASSRKSYSQEQHGLNWSREHDMLPRNNVSASSDDTSKKLESPTGRDRMASWKKLPSPAAKSVKEPTLKDKGDNKSFKSLNVPKIRTDVSETVFAAANELPLPRDSHDQPPKHQHKPSWGWGDQPSVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFSQKDSQHVGSPDVAKVSNSSMTEESDISPKHSDWSRRGSEDMLDCFHETENSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSPFDLFLAGKGAYYEHDDLTQISDLADIARCSANAPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVETFGTRIEKLIREKYLQLCELVGDEKIDIASTVIDEDTPLDDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPVVSGITLHGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQIPEEMSHDAQDLIDRLLTEDPHQRLGAIGAHEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHGYPPSELEDSSDADSLSGNSSVSNRQDEVVDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPDHDA 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10092720 10105903 + Cp4.1LG02g09870.1 Cpe02g01104 465053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 951 968 - -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 399 434 - -
Cpe02g01104 1022 SUPERFAMILY Protein kinase-like (PK-like) 625 945 IPR011009 -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 468 490 - -
Cpe02g01104 1022 Gene3D Transferase(Phosphotransferase) domain 1 696 919 - -
Cpe02g01104 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 315 339 - -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 210 228 - -
Cpe02g01104 1022 Gene3D Phosphorylase Kinase; domain 1 627 930 - -
Cpe02g01104 1022 SMART serkin_6 628 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01104 1022 CDD STKc_MAST_like 634 906 - -
Cpe02g01104 1022 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 2 1019 - -
Cpe02g01104 1022 ProSiteProfiles AGC-kinase C-terminal domain profile. 902 1005 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 237 252 - -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 940 969 - -
Cpe02g01104 1022 ProSiteProfiles Protein kinase domain profile. 628 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01104 1022 Coils Coil 57 77 - -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 401 424 - -
Cpe02g01104 1022 Coils Coil 382 402 - -
Cpe02g01104 1022 MobiDBLite consensus disorder prediction 189 293 - -
Cpe02g01104 1022 Pfam Protein kinase domain 645 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01104 1022 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 1019 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01104 Cpe-Chr2:10092720 Cpe05g00706 Cpe-Chr5:4326768 0 dispersed
Cpe02g01104 Cpe-Chr2:10092720 Cpe13g00064 Cpe-Chr13:499080 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62230 PF00069 Pkinase 6.00E-56 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01104 - - csv:101214945 1872.06