Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01122 ATGCAAGATCCGGCGTCAAATCCCGATTCCTCCATCTCCAACAATGCTTCTACTCCCAACATTCATCTTCCGCCGCCGCCGCCGCCGCTCTCTTCTACCAGACCCCACCACCGCAGGGCCCACTCCGAACTCACATTTCGGTTCCCTGATGACATCATGGATCTCTCTTCCTCTGATCCCTTCACTGCCGGATCCGCCGCCCTCGCTTTGGACGAGATCGGATCTGAGGACGACCTCTTTTCCACCTACATTGATGTAGACAAGCTTGGCCCCGGCACTTCTTCTGCAGATCACACCGCTAATGCTGAACCTGAGAAGACTCCCAGACCGAGGCATAGATATAGCAACTCTGTCGATGGTTCCACCTCTACCAGTGTGTTTGGGGATGTACTGGACGCCAAGAAAGCTATGCCTCCTGATAAATTAGCTGAGCTTTGGACTCTTGATCCCAAGCGCGCCAAAAGGATTTTGGCCAATCGACAGTCTGCTTCCCGTTCTAAAGAGAGGAAGGCACGATACATGCAGGAACTCGAGCGCAAAGTTCAGACCCTTCAAACAGAGGCGACAACTCTTTCAGCTCAACTCGCACTGTTCCAGAGGGATACGACAGGTCTTAGTAGTGAAAATACAGAACTTAAGCTTCGGTTGCAGGCAATGGAGCAACAGGCTCATTTGCGGGATGCCTTGAATGAAGCACTAAAGAACGAAGTTGAGAGGCTCAAAGTAGCCACTGGAGAGACATCAGGCGCCTCCGATTCCTTCAACTTGGGGGGAATGCCTCACATGCCATATTTAGCATCCAGTTTCTTTCCCCTGCATCAGCAGCCAGGTTCTGCCGGCACCCACAACATGCTGCAGATGCCATTATACGGCCATTCCTCATCAAACATGTCAATACATCCTCTGCATCATCAGCTGAATTCACATCAATTCTCTGATACCATGCAGAGTGATCCACTTGGGCGATTACAGGGTCTGGATATCAGCAGCAATGGATCCCCTCTGGTGAAATCAGAAGTCCCTTCTCTTTCTGCTAGTGAAAGTAGCGCCACATTTTGA 1059 50.99 MQDPASNPDSSISNNASTPNIHLPPPPPPLSSTRPHHRRAHSELTFRFPDDIMDLSSSDPFTAGSAALALDEIGSEDDLFSTYIDVDKLGPGTSSADHTANAEPEKTPRPRHRYSNSVDGSTSTSVFGDVLDAKKAMPPDKLAELWTLDPKRAKRILANRQSASRSKERKARYMQELERKVQTLQTEATTLSAQLALFQRDTTGLSSENTELKLRLQAMEQQAHLRDALNEALKNEVERLKVATGETSGASDSFNLGGMPHMPYLASSFFPLHQQPGSAGTHNMLQMPLYGHSSSNMSIHPLHHQLNSHQFSDTMQSDPLGRLQGLDISSNGSPLVKSEVPSLSASESSATF 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10238148 10242238 + Cp4.1LG02g11360.1 Cpe02g01122 465071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01122 352 PANTHER ATBZIP TRANSCRIPTION FACTOR 11 349 - -
Cpe02g01122 352 MobiDBLite consensus disorder prediction 91 121 - -
Cpe02g01122 352 Coils Coil 226 246 - -
Cpe02g01122 352 Gene3D - 150 202 - -
Cpe02g01122 352 MobiDBLite consensus disorder prediction 312 352 - -
Cpe02g01122 352 CDD bZIP_plant_RF2 152 201 IPR044759 GO:0003700|GO:0006355
Cpe02g01122 352 Coils Coil 167 194 - -
Cpe02g01122 352 Pfam bZIP transcription factor 151 207 IPR004827 GO:0003700|GO:0006355
Cpe02g01122 352 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 149 212 IPR004827 GO:0003700|GO:0006355
Cpe02g01122 352 MobiDBLite consensus disorder prediction 1 19 - -
Cpe02g01122 352 SMART brlzneu 147 211 IPR004827 GO:0003700|GO:0006355
Cpe02g01122 352 SUPERFAMILY Leucine zipper domain 151 202 IPR046347 GO:0003700|GO:0006355
Cpe02g01122 352 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 349 - -
Cpe02g01122 352 MobiDBLite consensus disorder prediction 1 61 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01122 Cpe05g01003 CCT
Cpe02g01122 Cpe16g00688 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00086 Cpe-Chr1:517656 Cpe02g01122 Cpe-Chr2:10238148 2.56E-64 dispersed
Cpe01g00989 Cpe-Chr1:5858476 Cpe02g01122 Cpe-Chr2:10238148 9.35E-58 dispersed
Cpe02g01122 Cpe-Chr2:10238148 Cpe16g00688 Cpe-Chr16:7121247 3.08E-135 dispersed
Cpe08g00110 Cpe-Chr8:710408 Cpe02g01122 Cpe-Chr2:10238148 1.23E-41 dispersed
Cpe15g00569 Cpe-Chr15:6498133 Cpe02g01122 Cpe-Chr2:10238148 3.12E-46 dispersed
Cpe02g01122 Cpe-Chr2:10238148 Cpe05g01003 Cpe-Chr5:6554341 3.54E-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49066 PF00170 bZIP_1 1.30E-08 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01122 - - gmx:100790732 412.535