Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01138 ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCTGCTAATTCCCATCCTTCTTTCACTTTCTCCACTCATCCTTTCATGACTACTTCTTACTCCGACCTTCTCGCCGCCGGCAGCAACGATCTTCCATCCTCCGCCGCCGCCCACGGAGCTCACCGAGGCTCTGGAACCGGAGTTCCTAAATTCAAATCCCTCCCTCCTCCTTCTCTGCCTCTGTTGCCACCTACTCTGATTCCTTCTTCCCTGTTCTCAATTCCTCCTGGTTTGAGCCCCACCGAGCTTCTTGATTCGCCGGTTCTCCTCAGTGCTTCTTATGTTCTGCCGTCGCCGACCACCGGGAGTTTCCCGTCGCAGTCGTTGAATTGGAAGAACAATTCTGGGTATAATCAACAGAGCATCAAAGAAGAGAACAAATTCTTGTCGGAATTCTCATTTCTAACTCAATCGTCTCAGCCGCCGACATCTTTTCAGCCAGCTCCGACGACTGAGGGAAAGAAACAGGACGGATCGATGCAGAGCTTCTCACCGGAATATGGGATTGTTCAAAACCAGAGCCAGAACAACGCCGGCAGGGATTACCCTCAACAATCTCAGACGGTGAATCGGAGATCCGACGACGGTTACAACTGGAGAAAATACGGCCAAAAACAGGTCAAGGGAAGTGAAAATCCGAGAAGCTATTACAAGTGCACCTTCCCCAATTGCCCAACGAAGAAAAAGGTCGAAAGATCCTTAGATGGACAGATCACGGAGATCGTTTACAAAGGCAGCCATAACCACCCGAAGCCACAGTCAACGAGGAAGTCATCGTTGTCGTCCGCCGTGTCGGCGTCAAATCCAGCCGCCAACGATATGGCGGAGCAGTCATTCACAACCCAAGGAAGCGGTCAATTCGACGGCGTTGCAACGCCGGAGAATTCATTGATCTCGGTCGGCGACGATGACTTCGATCGGAGCTCTCAGAGGAGCAAATCTGCCGGAGACGATAACGACGATGACGAACCAGAGGCCAAGAGGTGGAGAAGGGATGGTGATAACAATGAAGGGATTTCAGCTGCAGGTAACCGGACCGTGAGAGAGCCGAGAGTCGTTGTTCAAACCACCAGCGACATCGACATTCTCGACGACGGTTACCGGTGGAGGAAGTATGGCCAAAAAGTGGTTAAGGGAAATCCAAATCCAAGGAGTTATTACAAATGCACAAACCCGGGATGTCCTGTAAGAAAGCATGTAGAGAGAGCCTCGCATGATCTACGAGCAGTGATCACAACCTACGAAGGCAAACACAACCACGAAGTCCCACCGGCACGCGGCAGCGGAAGCCATTCCCTAAGCCGTCCATTTCCCAGCAATGACTTATCGGCCACCGCAATCCACCCATTGGCGGTGACCCATCGAGCAAACAACGACGCCGGAGGCAGCAACAACAAGGACAACCTTCTTCATGGTCTGAGGCTACAACAATCTTCCGACAACCAAACACCATTCACACTGGAAATGGTGCAAAATCCGAATGGATTTTCATTCCCGGAATTTGGGAACTCCATGGGGATGGGATCCTACATGAATCCAACACAATCCAATGACAGTTTGTTCGTTAGAGCAAAAGAGGAGCCAAGAGATCATGACATGTTCATCCAATCTCTCCTATGTTGA 1653 51.12 MASSSGSLDTSANSHPSFTFSTHPFMTTSYSDLLAAGSNDLPSSAAAHGAHRGSGTGVPKFKSLPPPSLPLLPPTLIPSSLFSIPPGLSPTELLDSPVLLSASYVLPSPTTGSFPSQSLNWKNNSGYNQQSIKEENKFLSEFSFLTQSSQPPTSFQPAPTTEGKKQDGSMQSFSPEYGIVQNQSQNNAGRDYPQQSQTVNRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRKSSLSSAVSASNPAANDMAEQSFTTQGSGQFDGVATPENSLISVGDDDFDRSSQRSKSAGDDNDDDEPEAKRWRRDGDNNEGISAAGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHEVPPARGSGSHSLSRPFPSNDLSATAIHPLAVTHRANNDAGGSNNKDNLLHGLRLQQSSDNQTPFTLEMVQNPNGFSFPEFGNSMGMGSYMNPTQSNDSLFVRAKEEPRDHDMFIQSLLC 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10375710 10378366 + Cp4.1LG02g11140.1 Cpe02g01138 465087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01138 550 Gene3D WRKY domain 190 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 MobiDBLite consensus disorder prediction 41 65 - -
Cpe02g01138 550 ProSiteProfiles WRKY domain profile. 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 Gene3D WRKY domain 360 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 SUPERFAMILY WRKY DNA-binding domain 365 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 MobiDBLite consensus disorder prediction 253 357 - -
Cpe02g01138 550 MobiDBLite consensus disorder prediction 425 451 - -
Cpe02g01138 550 SMART WRKY_cls 373 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 SUPERFAMILY WRKY DNA-binding domain 202 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 MobiDBLite consensus disorder prediction 310 345 - -
Cpe02g01138 550 MobiDBLite consensus disorder prediction 258 303 - -
Cpe02g01138 550 ProSiteProfiles WRKY domain profile. 368 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 522 IPR044810 GO:0003700
Cpe02g01138 550 MobiDBLite consensus disorder prediction 147 203 - -
Cpe02g01138 550 Pfam WRKY DNA -binding domain 374 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g01138 550 MobiDBLite consensus disorder prediction 147 223 - -
Cpe02g01138 550 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 47 522 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01138 Cpe05g00995 CCT
Cpe02g01138 Cpe05g00995 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01138 Cpe-Chr2:10375710 Cpe03g00029 Cpe-Chr3:148105 1.48E-116 dispersed
Cpe02g01138 Cpe-Chr2:10375710 Cpe08g00850 Cpe-Chr8:6729186 3.23E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49068 PF03106 WRKY 3.30E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01138 K13424 - csv:101207158 843.573