Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01164 ATGGCGGAGGAGGAAGTGCCGATTTTAAGAACAGAGCATTCGCTTGATGTTTTGATTCCAGTAATTGCTAAGAAGAGGAATGTTTCTATTCCGAATCCCCTAGATGTAAACTGTTGTCGTTCTGGCTGTCCGTTTTCGAGATTAGAACATAGTAATCTAGAGTCATTAACACGATCGAAGTCCGCTATGAAGCTCGGTGGATTGATATTGTTCTATGTAATCGCTATCATTGTAGAGATTATTGGTGGCTTGAGAGCCAACAGTCTTTCTGTATTGACTGATGCAGCTCACTTGTTGAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCTGTCTGGGTTTCAGGCTGGGCGGCCACACCACAACACTCATTTGGGTTTAATCGCCTTGAAGTTATCGGTGCCCTTGTGTCTGTGCAGCTCATATGGCTGATTTCTGGGTTCTTAATCTACGAGGCAGCCAATCGGATCCTCGGCCACAAGACAAAGGTTAATGGATTGCTCATGTTCGCCATTGCAGCTTTTGGCTTCCTCCTTAACTTAGTTATGGTCATGTGGCTTGGCCATAGCCATAGCCATAGCCATAGCCATAGCCATAGCCATAGCCATGGCCACTCTCATTCTTGTCATCATGATCACTTGGATCATGACACTGACCATGAGGAGGAGGGACATTCACACAGTTCAAGTTCGAACATAAATCTCCAAGGTGCTTATCTTCATCTCATCTCTGATATGATTCAATCTGTTGGTGTGATGGTTGCTGGAGCTGTTCTATGGCTTAAACCCAACTGGGTCGTGGTGGATTTAATCTGTACTCTTGTGTTTTCTGTTCTTGCTTTAGCTACTACTGTTCCCATGCTTAGACATATAGGTGGTATACTGATGGAAGGAACACCCAAGGAGATAAACATTGAGAGGCTAGAACATGATATCAAGAACATCAAAGGTCAAGAACGAAACGTACTGAACGTATAA 978 43.97 MAEEEVPILRTEHSLDVLIPVIAKKRNVSIPNPLDVNCCRSGCPFSRLEHSNLESLTRSKSAMKLGGLILFYVIAIIVEIIGGLRANSLSVLTDAAHLLSDVAGFSVSLFAVWVSGWAATPQHSFGFNRLEVIGALVSVQLIWLISGFLIYEAANRILGHKTKVNGLLMFAIAAFGFLLNLVMVMWLGHSHSHSHSHSHSHSHGHSHSCHHDHLDHDTDHEEEGHSHSSSSNINLQGAYLHLISDMIQSVGVMVAGAVLWLKPNWVVVDLICTLVFSVLALATTVPMLRHIGGILMEGTPKEINIERLEHDIKNIKGQERNVLNV 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10553611 10554588 - Cp4.1LG02g11580.1 Cpe02g01164 465113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01164 325 Gene3D Cation efflux protein transmembrane domain 65 295 IPR027469 -
Cpe02g01164 325 Pfam Cation efflux family 69 296 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe02g01164 325 MobiDBLite consensus disorder prediction 208 227 - -
Cpe02g01164 325 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 297 IPR027469 -
Cpe02g01164 325 PANTHER METAL TOLERANCE PROTEIN B 4 318 - -
Cpe02g01164 325 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 318 - -
Cpe02g01164 325 MobiDBLite consensus disorder prediction 197 231 - -
Cpe02g01164 325 TIGRFAM CDF: cation diffusion facilitator family transporter 69 317 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01164 Cpe-Chr2:10553611 Cpe05g00762 Cpe-Chr5:4714423 1.67E-26 dispersed
Cpe02g01164 Cpe-Chr2:10553611 Cpe02g01210 Cpe-Chr2:10981278 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01164 K14689 - csv:116403740 416.387