Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01173 ATGGCTAACGACGTCGTTTTGCCCTTCCCCTTCCCCTCTTTTCTTCTCCTCATTTTCGCCTATTTGATTTGGTTTCATTTCCTCGCCCGTACGCTAACCGGTCCAAGAGTCTGGCCGGTCATAGGCAGCCTACCGGCTCTCATCTCGAATCGGCGGAGCCTCCATGACTGGATGGCTGGGAACCTCCGCTCCACAGGCGGCGCCGCCACATACCAAACTTGTACGGTGGCACTTCCATTCTTCGCTAGAAAACAAGGCTTCTACACGGTCACGTGCCACCCGAGAAACATCGAACACGTGCTCCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGACTGGCAAGCGGCTTTTCACGATCTTTTAGGTCAAGGGATTTTCAACAGCGACGGCGAGATTTGGCTGGTCCAGCGGAAGACGGCGGCGCTGGAGTTCACGACGAGGACGCTACGGCAGGCGATGGACCGGTGGGTGAATCGCACGATAAGGACGCGACTTTGGTGCATATTGGATAAGGCGGCGGAGTATAAAACGGCGGTTGATTTGCAGGATTTGTTGCTCCGGTTGACTTTCGATAACATTTGTGGGCTCACTTTTGGGAAAGATCCTCAAACTTTGTCGCCGGAATTGCCTGCAAGTCCCTTCGCTTTGGCGTTTGATTCCGCCACTGAAGCCACTCTTCACCGCCTTCTTTACCCTAGCATTTTATGGAGGTTAAAGAAGCTTCTGGGCATCGGAATGGAAAGAAGGTTAAAGGAGAGTTTAAAAGTAATAGAGGAATACATAAACGACGCCGTTGCATCCCGTAAAGAATCCCCCTCAGACGACTTATTATCCCGCTTCATGAAGAAGAAGCACGACGGCGACGGCGACGGCGACGGCAACCGCTTCTCCGCCGCAGTGCTCCACCGCATCGCCTTAAACTTCGTCCTCGCCGGCCGGGACACATCCTCCGTGGCACTCACGTGGTTCTTTTGGCTCGTAATGAATCACCCGCACGTGGAGGCTAAAATCCTCGCCGAAATCTCAACGGTTCTCCGCCAGACACGCGGCGAGGATCCACGACGGTGGATCGAAGAGCCGTTGATGTTCGACGAGGCCGATAAATTGGTGTATTTAAAAGCCGCGCTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCGCAGGATTTCAAATACGTCGTGGCTGATGACGTGTTGCCAGATGGCAGTTTTGTGCCGGCCGGTTCGACCGTGACGTATTCGATTTATTCGGCCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTGGGGAATTTAAACCGGACCGGTGGCTGTCGCCGGACGGGGACCGGTTCGAGGGGCCGAAAGATGGGTATAAATTCGTGGCGTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGATTTGGCTTATTTGCAAATGAAGTCCGTCGCCTCCGCCGTGCTCCTCCGGTACCAGCTGGCGCCGGTTCCCGGTCACCGGGTGGAACAAAAAATGTCTCTTACTCTTTTTATGAAGAATGGGCTTCGGGTTTATTTGCATCCTCGCCGGCTCGGCTAG 1563 54.32 MANDVVLPFPFPSFLLLIFAYLIWFHFLARTLTGPRVWPVIGSLPALISNRRSLHDWMAGNLRSTGGAATYQTCTVALPFFARKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLVQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPASPFALAFDSATEATLHRLLYPSILWRLKKLLGIGMERRLKESLKVIEEYINDAVASRKESPSDDLLSRFMKKKHDGDGDGDGNRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEAKILAEISTVLRQTRGEDPRRWIEEPLMFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGSFVPAGSTVTYSIYSAGRMKSIWGEDCGEFKPDRWLSPDGDRFEGPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYQLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10671096 10673340 + Cp4.1LG02g11700.1 Cpe02g01173 465122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01173 520 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 518 - -
Cpe02g01173 520 Pfam Cytochrome P450 89 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cpe02g01173 520 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 SUPERFAMILY Cytochrome P450 24 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PANTHER CYTOCHROME P450 8 518 - -
Cpe02g01173 520 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01173 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01173 Cpe-Chr2:10671096 Cpe13g00150 Cpe-Chr13:1093759 0 dispersed
Cpe02g01173 Cpe-Chr2:10671096 Cpe20g00858 Cpe-Chr20:7734937 2.24E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01173 K15401 - csv:101214516 941.414