Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01187 ATGTCCGTCTCCGTCGCCGTTTCGAATTCGCCGGGGTTTTCCCCTTCGTCCTCGATGTTCTGCAACAAGGCGGCGATTATTTCTCCGGCGCCGGAAGCTCTAACACTGACGTTGGCTCATTTGAAGTCGTCTCAGCCTTCGTCGTCTTGCTCGTCTTCGCCGTCTTCCCCTTCTTCCCCTTTTTGGATTAGGTTTCCAAAGCCCCCTTCTGGGCTTTCCGCCGTGGCGCCTATGGCTTCCACTTCTTCTTCTTCGTCTCCAACGTCGTCCAACTCGATCACGAAGAGGAAGAGACCAGCGAGGTTGGATATTCCGTTGACGCCGTTGAGCTTTGGAGCTCTGGCGTCGCCGTCGTCGTCGTTCAGGGACGTGATGGAGGCCGAGAGAGATGGGTATTCTGTTTATTGCAAGAGAGGGAGGCGGAGAATCTCCATGGAAGATCGGTATTCAGCCGCTGTTGATCTTTGTGGTGATTCTAAAGAGGCATTTTTTGGTGTATTTGATGGACATGGCGGTTCAAAGGCGGCAGAATTTGCAGCAAATAACTTAAAGAAGAACATAATGAACGAACTTGAAAGAATGACTGACTATGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAAGATCAACGCGGTGGGTCATGTTGTGTAACAGCCCTGATCAAGAAAGGCAACCTTATAATCTCCAACGCCGGTGACTGCCGTGCCGTTCTTAGCAGCGAGGGCATCGCAGAAGCCATCACCTCCGACCACCGCCCGTCTCGAGAAGACGAAAGGCAGCGAATCGAGTCAAGGGGTGGATACGTTGATCTCTGCAATGGCGTTTGGAGAGTCCAAGGATCTCTAGCTGTAACAAGAGGAATTGGAGATGCTCACTTGAAACAATGGGTGATAGCCGAGCCAGAGACAACGTCGATACGGATCGAAGCTCGACACGAGTTCTTGATCTTGGCCTCCGACGGGTTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATCGTGCGCCCATCATGTGTGGGGATTGAGAAGGCAACGCCATTGGAGGCCTGTAAAAAGCTCGTGGAGCTATCACTTTCAAGAGGCTCAGTGGATGATATTAGTGTAGTTCTTATTCAATTGCCTAACTTCATTTGA 1158 50.78 MSVSVAVSNSPGFSPSSSMFCNKAAIISPAPEALTLTLAHLKSSQPSSSCSSSPSSPSSPFWIRFPKPPSGLSAVAPMASTSSSSSPTSSNSITKRKRPARLDIPLTPLSFGALASPSSSFRDVMEAERDGYSVYCKRGRRRISMEDRYSAAVDLCGDSKEAFFGVFDGHGGSKAAEFAANNLKKNIMNELERMTDYEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLIISNAGDCRAVLSSEGIAEAITSDHRPSREDERQRIESRGGYVDLCNGVWRVQGSLAVTRGIGDAHLKQWVIAEPETTSIRIEARHEFLILASDGLWETVSNQEAVDIVRPSCVGIEKATPLEACKKLVELSLSRGSVDDISVVLIQLPNFI 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10796079 10798218 + Cp4.1LG02g11790.1 Cpe02g01187 465136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01187 385 MobiDBLite consensus disorder prediction 75 95 - -
Cpe02g01187 385 ProSitePatterns PPM-type phosphatase domain signature. 163 171 IPR000222 GO:0043169
Cpe02g01187 385 SMART PP2C_4 122 379 IPR001932 -
Cpe02g01187 385 Pfam Protein phosphatase 2C 136 374 IPR001932 -
Cpe02g01187 385 ProSiteProfiles PPM-type phosphatase domain profile. 131 381 IPR001932 -
Cpe02g01187 385 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 384 - -
Cpe02g01187 385 PANTHER PROTEIN PHOSPHATASE 2C 3 384 IPR015655 GO:0004722|GO:0006470
Cpe02g01187 385 SUPERFAMILY PP2C-like 131 383 IPR036457 -
Cpe02g01187 385 CDD PP2Cc 131 381 IPR001932 -
Cpe02g01187 385 Coils Coil 180 200 - -
Cpe02g01187 385 Gene3D - 132 384 IPR036457 -
Cpe02g01187 385 MobiDBLite consensus disorder prediction 73 99 - -
Cpe02g01187 385 SMART PP2C_SIG_2 140 381 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01187 Cpe20g00876 CCT
Cpe02g01187 Cpe20g00876 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00122 Cpe-Chr1:697885 Cpe02g01187 Cpe-Chr2:10796079 1.57E-119 dispersed
Cpe02g01187 Cpe-Chr2:10796079 Cpe13g01170 Cpe-Chr13:9244405 3.90E-87 dispersed
Cpe14g00210 Cpe-Chr14:1175110 Cpe02g01187 Cpe-Chr2:10796079 8.45E-44 dispersed
Cpe01g01028 Cpe-Chr1:6082343 Cpe02g01187 Cpe-Chr2:10796079 2.73E-117 wgd
Cpe02g01187 Cpe-Chr2:10796079 Cpe20g00876 Cpe-Chr20:7869092 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01187 K17506 - csv:101207841 609.372