Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01187 | ATGTCCGTCTCCGTCGCCGTTTCGAATTCGCCGGGGTTTTCCCCTTCGTCCTCGATGTTCTGCAACAAGGCGGCGATTATTTCTCCGGCGCCGGAAGCTCTAACACTGACGTTGGCTCATTTGAAGTCGTCTCAGCCTTCGTCGTCTTGCTCGTCTTCGCCGTCTTCCCCTTCTTCCCCTTTTTGGATTAGGTTTCCAAAGCCCCCTTCTGGGCTTTCCGCCGTGGCGCCTATGGCTTCCACTTCTTCTTCTTCGTCTCCAACGTCGTCCAACTCGATCACGAAGAGGAAGAGACCAGCGAGGTTGGATATTCCGTTGACGCCGTTGAGCTTTGGAGCTCTGGCGTCGCCGTCGTCGTCGTTCAGGGACGTGATGGAGGCCGAGAGAGATGGGTATTCTGTTTATTGCAAGAGAGGGAGGCGGAGAATCTCCATGGAAGATCGGTATTCAGCCGCTGTTGATCTTTGTGGTGATTCTAAAGAGGCATTTTTTGGTGTATTTGATGGACATGGCGGTTCAAAGGCGGCAGAATTTGCAGCAAATAACTTAAAGAAGAACATAATGAACGAACTTGAAAGAATGACTGACTATGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAAGATCAACGCGGTGGGTCATGTTGTGTAACAGCCCTGATCAAGAAAGGCAACCTTATAATCTCCAACGCCGGTGACTGCCGTGCCGTTCTTAGCAGCGAGGGCATCGCAGAAGCCATCACCTCCGACCACCGCCCGTCTCGAGAAGACGAAAGGCAGCGAATCGAGTCAAGGGGTGGATACGTTGATCTCTGCAATGGCGTTTGGAGAGTCCAAGGATCTCTAGCTGTAACAAGAGGAATTGGAGATGCTCACTTGAAACAATGGGTGATAGCCGAGCCAGAGACAACGTCGATACGGATCGAAGCTCGACACGAGTTCTTGATCTTGGCCTCCGACGGGTTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATCGTGCGCCCATCATGTGTGGGGATTGAGAAGGCAACGCCATTGGAGGCCTGTAAAAAGCTCGTGGAGCTATCACTTTCAAGAGGCTCAGTGGATGATATTAGTGTAGTTCTTATTCAATTGCCTAACTTCATTTGA | 1158 | 50.78 | MSVSVAVSNSPGFSPSSSMFCNKAAIISPAPEALTLTLAHLKSSQPSSSCSSSPSSPSSPFWIRFPKPPSGLSAVAPMASTSSSSSPTSSNSITKRKRPARLDIPLTPLSFGALASPSSSFRDVMEAERDGYSVYCKRGRRRISMEDRYSAAVDLCGDSKEAFFGVFDGHGGSKAAEFAANNLKKNIMNELERMTDYEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLIISNAGDCRAVLSSEGIAEAITSDHRPSREDERQRIESRGGYVDLCNGVWRVQGSLAVTRGIGDAHLKQWVIAEPETTSIRIEARHEFLILASDGLWETVSNQEAVDIVRPSCVGIEKATPLEACKKLVELSLSRGSVDDISVVLIQLPNFI | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10796079 | 10798218 | + | Cp4.1LG02g11790.1 | Cpe02g01187 | 465136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01187 | 385 | MobiDBLite | consensus disorder prediction | 75 | 95 | - | - | |
Cpe02g01187 | 385 | ProSitePatterns | PPM-type phosphatase domain signature. | 163 | 171 | IPR000222 | GO:0043169 | |
Cpe02g01187 | 385 | SMART | PP2C_4 | 122 | 379 | IPR001932 | - | |
Cpe02g01187 | 385 | Pfam | Protein phosphatase 2C | 136 | 374 | IPR001932 | - | |
Cpe02g01187 | 385 | ProSiteProfiles | PPM-type phosphatase domain profile. | 131 | 381 | IPR001932 | - | |
Cpe02g01187 | 385 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED | 3 | 384 | - | - | |
Cpe02g01187 | 385 | PANTHER | PROTEIN PHOSPHATASE 2C | 3 | 384 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe02g01187 | 385 | SUPERFAMILY | PP2C-like | 131 | 383 | IPR036457 | - | |
Cpe02g01187 | 385 | CDD | PP2Cc | 131 | 381 | IPR001932 | - | |
Cpe02g01187 | 385 | Coils | Coil | 180 | 200 | - | - | |
Cpe02g01187 | 385 | Gene3D | - | 132 | 384 | IPR036457 | - | |
Cpe02g01187 | 385 | MobiDBLite | consensus disorder prediction | 73 | 99 | - | - | |
Cpe02g01187 | 385 | SMART | PP2C_SIG_2 | 140 | 381 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g01187 | Cpe20g00876 | CCT | |
Cpe02g01187 | Cpe20g00876 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00122 | Cpe-Chr1:697885 | Cpe02g01187 | Cpe-Chr2:10796079 | 1.57E-119 | dispersed | |
Cpe02g01187 | Cpe-Chr2:10796079 | Cpe13g01170 | Cpe-Chr13:9244405 | 3.90E-87 | dispersed | |
Cpe14g00210 | Cpe-Chr14:1175110 | Cpe02g01187 | Cpe-Chr2:10796079 | 8.45E-44 | dispersed | |
Cpe01g01028 | Cpe-Chr1:6082343 | Cpe02g01187 | Cpe-Chr2:10796079 | 2.73E-117 | wgd | |
Cpe02g01187 | Cpe-Chr2:10796079 | Cpe20g00876 | Cpe-Chr20:7869092 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01187 | K17506 | - | csv:101207841 | 609.372 |