Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01189 ATGAACAACAACCCATCACAGGAAAATGTTGAAACTGAAGGCATTTCTTCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGCTGGCTTACCAAAGTTTAGGAGTTGTTTACGGCGACCTCAGCACGTCGCCTCTATATGTTTATAAAACCACATTCTCTGGGAAATTGAGTTTACATGAGAATGATGAAGAGATTTATGGGGTTTTATCCTTCATCTTCTGGACGTTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAACGGTGAAGGGGGTACCTTTGCTCTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCAAATCAAGAGCCTGCTGATGAAAAGTTATCTGCATATGAAATGAAGGAAAGCTTGGAGACAAGACCAAGTGCTGCTCTAAAATCTTTTTTTCAGCTGCACCCGTCTTTTCGAAAAGATTATGTTGTTTTAATCTCGTGCGTCGTCTTAGTTGGATTGTTCTCCCTTCAGCATTGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGACATGGCTCGTCTCTATTAGTGTTATCGGAATGTATAATATTATCAAGTGGAATCCGCGTATATACCATGCTCTCTCTCCCGTTTATATGCTGAAGTTCCTTCATAGCACGGGCGTTGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCGATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCGACGCTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCATTGATTCTTGCTTATCTGGGTGAGGCTGCATTCCTTTCTAAGCATCATGAAGATATTCAGAGAAGCTTCTACAAAGCGATACCCGAAGCGGTGTTTTGGCCGGTGTTCGTCGTGGCCACTTTTGCTTCTGTTGTAGGAAGTCAGGCCGTGATTTCGGCTACGTTCTCGCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAACTATGCACACTTCAAACCAGATATGTGGGCAAATTTATATTCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACGAACATGTTAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTCGTCTCGACTTGCTTGATGGCACTCGTGATACTAATCGTTTGGAAGCAGAGGTTGATCGGCGCCATAGCGTTTTTCATGTTTTTCGGGTCCATTGAACTACTTTACATCTCGGCATCAATCAGCAAAGTTCACGAAGGTGGGTGGATACCCATCGTGCTTTCTATACTCTTTATGTGTTCGATGTATACATGGTACTACGGGACAATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCGATGAATCGGATACTTTCTTCCGGGCCTAGCCTTGGCATAGTGCGTGTGCCCGGAATAGGCCTCATATACACTAATCTGGTCTCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACGTTGCCTGCATTTCATCAAGTGCTCGTGTTTGTTTGTATAAAGTACGTTCAAGTTCCCCATATCGACGAAGAACATCGACTGCTCATCACAAGGGTGGGACCGAAAGAATGCAACATGTTTCGGTGCGTCGTGAGGTATGGCTATAGGGATTTGTTACAAGAAAACTACGATTTCGAGAACAGGTTGGTGTTTTCTCTAATGCAATATGTAGACACAGAAGATCAGTTTTGGAAACCAATGACACCTTGTGAATATGAACCATTGGAGCAGTCTTCCTACAAGTATAAAGCGACAGATACTGCGGTCGACGATCGGGAGAAGACGACACATAGCGAGGAAGCGATGCTGATAATGAGAGCGAAAGAGTCGGGAGTCACGTACATTTTCGGGCATTGCTCGGTCAAGGCCAAGAAATCGTCCTCCATTCTAAAGAAGTTGGGTATTGATATTGTGTATGCTTTTTTGAACCAGAATTGTAGAGAGCCTGAGGCTTTACTGAATGTGCCTCACACTTCTCTGTTGGAGGTTGGTATGGTTTATTATGTATAG 2094 43.51 MNNNPSQENVETEGISSKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPADEKLSAYEMKESLETRPSAALKSFFQLHPSFRKDYVVLISCVVLVGLFSLQHCGTHKVAFMFAPIITTWLVSISVIGMYNIIKWNPRIYHALSPVYMLKFLHSTGVEGWISLGGVVLSITGVEAMFADLGHFSTLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQICGQIYIPEVNWMLMCLCLAVTIGLRDTNMLGHAYGLAVTIVMFVSTCLMALVILIVWKQRLIGAIAFFMFFGSIELLYISASISKVHEGGWIPIVLSILFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVSGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEHRLLITRVGPKECNMFRCVVRYGYRDLLQENYDFENRLVFSLMQYVDTEDQFWKPMTPCEYEPLEQSSYKYKATDTAVDDREKTTHSEEAMLIMRAKESGVTYIFGHCSVKAKKSSSILKKLGIDIVYAFLNQNCREPEALLNVPHTSLLEVGMVYYV 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10820585 10825189 + Cp4.1LG02g11930.1 Cpe02g01189 465138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01189 697 Pfam K+ potassium transporter 33 565 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe02g01189 697 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 153 697 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe02g01189 697 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 157 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe02g01189 697 PANTHER POTASSIUM TRANSPORTER 18 157 - -
Cpe02g01189 697 PANTHER POTASSIUM TRANSPORTER 153 697 - -
Cpe02g01189 697 TIGRFAM kup: potassium uptake protein 152 697 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01189 Cpe20g00865 CCT
Cpe02g01189 Cpe20g00865 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01189 Cpe-Chr2:10820585 Cpe03g00669 Cpe-Chr3:4007424 0 dispersed
Cpe02g01189 Cpe-Chr2:10820585 Cpe04g00441 Cpe-Chr4:5169435 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01189 K03549 - csv:101222845 1225.31