Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01210 ATGGCGGAGGAGGAAGTGCCGATTTTAAGAACAGAGCATTCGCTTGATGTTTTGATTCCAGTAATTGCTAAGAAGAGGAATGTTTCTATTCCGAATCCCCTAGATGTAAACTGTTGTCGTTCTGGCTGTCCGTTTTCGAGATTAGAACATAGTAATCTAGAGTCATTAACACGATCGAAGTCCGCTATGAAGCTCGGTGGATTGATATTGTTCTATGTAATCGCTATCATTGTAGAGATTATTGGTGGCTTGAGAGCCAACAGTCTTTCTGTATTGACTGATGCAGCTCACTTGTTGAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCTGTCTGGGTTTCAGGCTGGGCGGCCACACCACAACACTCATTTGGGTTTAATCGCCTTGAAGTTATCGGTGCCCTTGTGTCTGTGCAGCTCATATGGCTGATTTCTGGGTTCTTAATCTACGAGGCAGCCAATCGGATCCTCGGCCACAAGACAAAGGTTAATGGATTGCTCATGTTCGCCATTGCAGCTTTTGGCTTCCTCCTTAACTTAGTTATGGTCATGTGGCTTGGCCATAGCCATAGCCATAGCCATAGCCATAGCCATAGCCATAGCCATGGCCACTCTCATTCTTGTCATCATGATCACTTGGATCATGACACTGACCATGAGGAGGAGGGACATTCACACAGTTCAAGTTCGAACATAAATCTCCAAGGTGCTTATCTTCATCTCATCTCTGATATGATTCAATCTGTTGGTGTGATGGTTGCTGGAGCTGTTCTATGGCTTAAACCCAACTGGGTCGTGGTGGATTTAATCTGTACTCTTGTGTTTTCTGTTCTTGCTTTAGCTACTACTGTTCCCATGCTTAGACATATAGGTGGTATACTGATGGAAGGAACACCCAAGGAGATAAACATTGAGAGGCTAGAACATGATATCAAGAACATCAAAGGTGTTCTTGCTTTGCATGACTTGCATATTTGGTCAATAAGTGTCGGCAAAGTTGTGTTGTGTTGCCATGTTGTAGTTGAACATGGAGTTTGTGTTAGGGATACAATTTCTAGGATTAGGAACCTCTGTGAAAAGAGATACAATATAGTTCATACCACCATTCAAGTAGAGTAG 1122 43.23 MAEEEVPILRTEHSLDVLIPVIAKKRNVSIPNPLDVNCCRSGCPFSRLEHSNLESLTRSKSAMKLGGLILFYVIAIIVEIIGGLRANSLSVLTDAAHLLSDVAGFSVSLFAVWVSGWAATPQHSFGFNRLEVIGALVSVQLIWLISGFLIYEAANRILGHKTKVNGLLMFAIAAFGFLLNLVMVMWLGHSHSHSHSHSHSHSHGHSHSCHHDHLDHDTDHEEEGHSHSSSSNINLQGAYLHLISDMIQSVGVMVAGAVLWLKPNWVVVDLICTLVFSVLALATTVPMLRHIGGILMEGTPKEINIERLEHDIKNIKGVLALHDLHIWSISVGKVVLCCHVVVEHGVCVRDTISRIRNLCEKRYNIVHTTIQVE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10981278 10982399 - Cp4.1LG02g13500.1 Cpe02g01210 465159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01210 373 SUPERFAMILY Cation efflux protein transmembrane domain-like 68 297 IPR027469 -
Cpe02g01210 373 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 301 373 IPR036837 -
Cpe02g01210 373 MobiDBLite consensus disorder prediction 208 227 - -
Cpe02g01210 373 PANTHER METAL TOLERANCE PROTEIN B 4 373 - -
Cpe02g01210 373 MobiDBLite consensus disorder prediction 197 231 - -
Cpe02g01210 373 Pfam Cation efflux family 69 296 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe02g01210 373 Gene3D Cation efflux protein transmembrane domain 65 295 IPR027469 -
Cpe02g01210 373 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 373 - -
Cpe02g01210 373 TIGRFAM CDF: cation diffusion facilitator family transporter 69 373 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00366 Cpe-Chr3:1961444 Cpe02g01210 Cpe-Chr2:10981278 4.44E-07 transposed
Cpe04g00090 Cpe-Chr4:833286 Cpe02g01210 Cpe-Chr2:10981278 7.77E-10 transposed
Cpe05g00762 Cpe-Chr5:4714423 Cpe02g01210 Cpe-Chr2:10981278 1.48E-42 transposed
Cpe11g00094 Cpe-Chr11:507367 Cpe02g01210 Cpe-Chr2:10981278 5.49E-10 transposed
Cpe02g01164 Cpe-Chr2:10553611 Cpe02g01210 Cpe-Chr2:10981278 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01210 K14689 - csv:116403740 486.878