Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01211 ATGGCGGAGATTTGCTGTAAAGTGATAGGTGAGAGTGAGGCGTCGTCGTCCTGTGAGCCGAGCTCGCGAGTGGCTAGACGTCGGAGAATGGAGATCAGGAGGTGTAAATTTGTTGCCGGAGTTGCTCCGACGGAGACTGATACTGTTGCGAAGCGACAGAAGCTGGAGGATCGATCGGCGTCGCTTTCCAGAGACTGTGATAACGCAGTTGAGAACTGTGATTCCGGGGAAGAAGAGACTGTCGGGAGATTTGTGGCCGGAGAAGTTCCGAAGGAGGTGTCGACACCTCTGCATCGGGAATCTCCTATCATTCCTTTAGGCGGAGAGATTCCGAAGTTTGGATTCTCTTCTGTTTGTGGAAGACGGAGAGATATGGAAGACGCGGTGGCCGTTCATCCATCGCTTTGTTTTACAGACAAGGAAGCCACCGATAAGTTGCACTTGTTCGGTGTTTACGACGGCCATGGCTGCTCTCATGTGGCGATGAGGTGTAAGGATCGACTGCACGAGCTCGTGAAAGATGAGTTAGATCGGGAAGTGAAAGAAGAGGCTTCCGTCGCGGCGGAAGCTTCGAGGTGGGACGGCGCCATGAAGAGAATCTTCCGCCGAATGGACAACGAGGTTGTGGCGCGAAACAATGAAGAAGTTGTGGTTGCGAATTGCAGATGCGAACTGCAGTCACCGGACTGTGATGCCGTTGGATCCACCGCCGTCGTTGCAGTTGTGACGGCGAATAAGATCATCGTTGCTAACTGCGGCGATTCCAGAGCCGTTCTCTGTCGCAACGGGAAGGCCGTTCCTCTCTCCTCCGATCACAAGCCGGATCGGCCCGACGAGCTAAACCGGATCGAGGAAGCCGGCGGCCGTGTGATCTATTGGGACGGACCAAGAGTCCTCGGAGTTCTCGCCATGTCAAGAGCCATAGGCGATAACTACCTGAAACCGTATGTGATATCGGAGCCAGAGGTGACGATAACAGATCGGACGGCGGAGGACGAGTGCCTAATTCTGGCGAGCGATGGACTTTGGGATGTGGTTCCAAACGAGACGGCGTGCGGAGTTGCGAGCATGTGTCTCCGGGGAAAAACAGAGGCTCGGTCGCCGGGGTCACCGCCTGTGGTGGTGGAGACGGCGGTGGAAAGGGTGGGGGCGGAGAGGGCGGACAAGGCCTGCAACGATGCGTCGATACTGCTGACGAAGCTGGCGTTAGCCAGGCACAGTACGGACAACGTGAGCGTCGTGGTGGTGGACCTTAAGAGGGACACGTAG 1269 56.11 MAEICCKVIGESEASSSCEPSSRVARRRRMEIRRCKFVAGVAPTETDTVAKRQKLEDRSASLSRDCDNAVENCDSGEEETVGRFVAGEVPKEVSTPLHRESPIIPLGGEIPKFGFSSVCGRRRDMEDAVAVHPSLCFTDKEATDKLHLFGVYDGHGCSHVAMRCKDRLHELVKDELDREVKEEASVAAEASRWDGAMKRIFRRMDNEVVARNNEEVVVANCRCELQSPDCDAVGSTAVVAVVTANKIIVANCGDSRAVLCRNGKAVPLSSDHKPDRPDELNRIEEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTITDRTAEDECLILASDGLWDVVPNETACGVASMCLRGKTEARSPGSPPVVVETAVERVGAERADKACNDASILLTKLALARHSTDNVSVVVVDLKRDT 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10987820 10990430 + Cp4.1LG02g13660.1 Cpe02g01211 465160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01211 422 ProSitePatterns PPM-type phosphatase domain signature. 148 156 IPR000222 GO:0043169
Cpe02g01211 422 ProSiteProfiles PPM-type phosphatase domain profile. 112 418 IPR001932 -
Cpe02g01211 422 CDD PP2Cc 112 418 IPR001932 -
Cpe02g01211 422 Gene3D - 106 422 IPR036457 -
Cpe02g01211 422 SUPERFAMILY PP2C-like 110 419 IPR036457 -
Cpe02g01211 422 SMART PP2C_4 100 416 IPR001932 -
Cpe02g01211 422 Coils Coil 52 72 - -
Cpe02g01211 422 Pfam Protein phosphatase 2C 112 378 IPR001932 -
Cpe02g01211 422 PANTHER PROTEIN PHOSPHATASE 2C 37 46 421 - -
Cpe02g01211 422 PANTHER ALPHABET, ISOFORM E-RELATED 46 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01211 Cpe-Chr2:10987820 Cpe13g01100 Cpe-Chr13:8872117 2.95E-121 dispersed
Cpe02g01211 Cpe-Chr2:10987820 Cpe09g00127 Cpe-Chr9:755694 3.79E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01211 K14497 - csv:101206871 639.417