Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01220 ATGCTTCCTCTTCTTCTTTTATTTGGTCTCCTCCTCCTCCTCCTCCTTTGCCTCCAATGGCGCCACCCCAACCACCACCTCCTCCCCCCTGGCTCCATGGGCTGGCCTTACATAGGCGAAACCTTCAAACTCTACACCCAAAACCCCAACTCCTTCTTCTCCATTAGGCAAAAAAGATATGGGGATGTGTTTAAGACACACATATTGGGATGTCCATGTGTGATGATTTCAAGCCCTGAGGCTGCCAGAGTTGTCCTTGTGAGTAAGGCTCATCTCTTCAAGCCAACCTACCCACCAAGCAAAGAGAAAATGATTGGCCCTCAAGCTTTGTTCTTCCACCAAGGCCCTTACCATTCTCGCCTCAAGAAGCTCATCCAAGCCTCCTTTTTGCCCTCTGCTATCAAACCCTCTGTCTCTCAAATTGAGAACATCGTGCTTCGCCTTTTACCCTCTTGGGATAACTCCCAAATCAATACCTTACAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCCGCTTTTGGTGACCAACAAGACTTGGAAATTGAGAGAATTAAACATCTGTACCAATGCCTTGAAAAAGGCTATAATTCTATGCCTCTTGATCTTCCCGGAACGCCTTTTCGTAAAGCAATGAAGGCGAGGAAGTTGCTGAGTGAGACATTGGGGAAATTGATTGAGAAAAGACAGCGGAGCAATGAGTATGGCGGTGGGTTGCTGGCGGTGCTTCTAGGCGGCGACGGCGACGGCGACAAAGTGGAGAAAAATAAGCTGAGTAATTCACAAATAGCTGATAACATAATAGGAGTGATCTTTGCAGCTCAAGACACGACAGCTAGTGTTCTTACATGGATTCTCAAAGAGGCAGTGGAAGAGGTGGAGTTCGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCGCTGTTCAGAACCATTCATCACTCTGCACATTTCTTCCCACACCCCGAGAAGTTTGATCCTTCAAGATTCGAGGTACCACCTCGACCAAACACGTACATGCCATTTGGAAATGGAGTGCACTCGTGTCCCGGCAGCGAGATGGCTAAGCTTGAAATCCTCGTTCTTCTCCACCACTTCATCACCGGTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAATACGGTCCATTTCCTGTGCCTAAAGGTGGCTTACCCATTAAAGTATTTTCAAGGAAGAACAAGATTACTTCTTTGAATTGA 1236 46.6 MLPLLLLFGLLLLLLLCLQWRHPNHHLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSRLKKLIQASFLPSAIKPSVSQIENIVLRLLPSWDNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKLLSETLGKLIEKRQRSNEYGGGLLAVLLGGDGDGDKVEKNKLSNSQIADNIIGVIFAAQDTTASVLTWILKEAVEEVEFEGYLIPRGWKVLPLFRTIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEILVLLHHFITGYRWKVVGEESGIQYGPFPVPKGGLPIKVFSRKNKITSLN 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11038508 11043530 - Cp4.1LG02g13560.1 Cpe02g01220 465169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01220 411 Pfam Cytochrome P450 290 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 Pfam Cytochrome P450 29 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Cpe02g01220 411 Gene3D Cytochrome P450 20 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 Gene3D Cytochrome P450 289 403 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PANTHER CYTOCHROME P450 26 7 289 - -
Cpe02g01220 411 PANTHER CYTOCHROME P450 26 289 401 - -
Cpe02g01220 411 PRINTS E-class P450 group I signature 342 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS E-class P450 group I signature 352 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS E-class P450 group I signature 311 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS P450 superfamily signature 343 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g01220 411 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 7 289 - -
Cpe02g01220 411 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 289 401 - -
Cpe02g01220 411 SUPERFAMILY Cytochrome P450 22 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01220 Cpe-Chr2:11038508 Cpe04g00279 Cpe-Chr4:3474111 5.76E-150 dispersed
Cpe02g01220 Cpe-Chr2:11038508 Cpe14g00428 Cpe-Chr14:2689691 8.81E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01220 K09843 - twl:120003120 540.806